Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 4.0e-190 667.9 332 100.0
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 2.8e-188 661.8 332 98.8
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 2.7e-186 655.2 333 98.2
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 9.2e-179 630.2 333 93.4
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.2e-170 603.2 333 91.0
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.5e-168 596.3 333 90.1
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.3e-145 520.0 335 75.5
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 9.0e-142 507.3 331 74.3
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 8.4e-140 500.7 331 75.2
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.8e-138 494.2 331 73.1
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.3e-137 493.4 326 74.2
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 4.3e-136 488.4 337 72.4
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.6e-135 486.5 334 73.7
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 1.6e-135 486.5 331 71.3
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.1e-135 486.1 335 71.0
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 3.6e-135 485.3 323 73.1
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 6.2e-135 484.6 337 71.8
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.4e-134 483.4 333 71.8
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 3.4e-133 478.8 331 70.7
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 7.6e-133 477.6 323 72.4
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.7e-132 476.5 338 70.4
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 2.2e-132 476.1 331 72.2
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.9e-132 475.7 331 70.4
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 4.9e-132 474.9 322 72.4
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 6.4e-132 474.6 332 70.5
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 6.4e-132 474.6 331 71.3
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 1.1e-131 473.8 337 70.0
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 1.1e-131 473.8 331 70.4
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 1.9e-131 473.0 327 70.6
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.2e-130 470.3 334 70.7
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 3.5e-130 468.8 331 70.1
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 4.6e-130 468.4 331 68.3
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 7.9e-130 467.6 322 70.5
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 1.3e-129 466.8 334 70.7
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.3e-129 466.8 323 68.7
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.8e-129 466.5 331 68.3
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 3.0e-129 465.7 322 69.3
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.1e-128 463.8 331 67.4
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.5e-128 463.4 331 67.4
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.9e-128 463.0 336 68.2
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.9e-128 463.0 332 67.8
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 5.6e-128 461.5 321 68.2
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.3e-127 460.3 322 68.0
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 1.6e-127 459.9 330 67.6
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 2.8e-127 459.1 323 67.8
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 2.4e-126 456.1 313 69.6
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 3.1e-126 455.7 330 67.0
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 6.9e-126 454.5 309 70.2
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 9.0e-126 454.1 331 66.8
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 2.0e-125 453.0 332 68.4
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.0e-125 453.0 333 71.2
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 3.4e-125 452.2 336 67.0
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 3.4e-125 452.2 322 67.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 7.6e-125 451.1 332 68.7
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 1.3e-124 450.3 309 69.6
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.3e-124 450.3 324 67.0
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 4.9e-124 448.4 328 67.1
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 4.9e-124 448.4 325 68.3
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 6.4e-124 448.0 331 65.9
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.1e-123 447.2 313 68.1
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 5.5e-123 444.9 331 68.0
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 5.5e-123 444.9 307 69.4
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 9.3e-123 444.1 331 65.6
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.0e-121 440.7 318 66.0
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.9e-120 436.4 309 68.0
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 5.6e-120 434.9 332 65.1
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 3.7e-119 432.2 317 65.0
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 3.7e-119 432.2 317 65.0
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 3.7e-119 432.2 317 65.0
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 9.0e-118 427.6 317 64.7
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 2.0e-117 426.4 317 64.0
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 2.0e-117 426.4 317 64.0
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 2.0e-117 426.4 317 64.0
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 2.2e-116 422.9 317 63.7
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 2.9e-116 422.5 318 64.5
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 1.1e-115 420.6 317 64.0
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.4e-115 420.2 322 62.4
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 3.2e-115 419.1 322 62.4
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 9.3e-115 417.5 331 64.0
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 9.3e-115 417.5 327 63.6
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 3.0e-113 412.5 335 65.4
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.9e-113 412.1 315 61.9
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 8.7e-113 411.0 313 62.3
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.5e-112 409.5 329 61.1
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.3e-111 407.1 313 63.3
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.2e-111 406.4 331 59.8
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.2e-111 406.4 318 63.2
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.4e-110 402.9 313 62.6
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 1.3e-105 387.1 333 61.9
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.0e-96 356.7 309 57.9
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 9.1e-94 347.8 307 56.7
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 5.9e-93 345.1 312 55.1
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.5e-91 339.7 288 58.3
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.5e-88 330.5 204 80.4
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 3.8e-84 315.8 326 49.7
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.5e-83 313.2 203 73.9
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 3.0e-81 306.2 305 50.5
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.4e-78 297.4 306 49.0
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.2e-76 290.0 239 58.2
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 2.0e-69 266.9 215 59.1
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.1e-67 261.2 202 62.4
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.5e-67 258.8 162 81.5
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 2.2e-63 246.9 177 67.2
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 6.8e-57 225.3 163 65.6
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.0e-52 209.1 126 79.4
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.5e-51 206.8 283 42.8
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.8e-49 198.7 155 66.5
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.4e-46 190.3 197 50.8
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.6e-44 181.8 133 61.7
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.3e-41 173.7 144 61.1
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.3e-41 173.7 134 64.2
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 8.1e-34 148.7 91 76.9
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.7e-28 131.0 126 53.2
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.2e-23 114.0 84 64.3
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.1e-22 111.7 72 77.8
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 9.9e-16 88.6 288 30.2
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 2.1e-13 80.9 70 57.1
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 7.4e-11 72.4 173 31.8
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.2e-08 65.1 191 29.3


User provided reference genes

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