Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g080250.3 Solanum lycopersicum HOM05D004245 ORTHO05D004783 2.6e-80 302.0 151 100.0
PGSC0003DMG400005159 Solanum tuberosum HOM05D004245 ORTHO05D004783 7.8e-77 290.4 151 95.4
CAN.G1226.1 Capsicum annuum HOM05D004245 ORTHO05D004783 8.9e-73 276.9 151 90.1
Peaxi162Scf00690g00216 Petunia axillaris HOM05D004245 ORTHO05D004783 3.4e-64 248.4 151 84.1
Nitab4.5_0004954g0010 Nicotiana tabacum HOM05D004245 ORTHO05D004783 4.9e-63 244.6 149 81.2
Cc10_g02990 Coffea canephora HOM05D004245 ORTHO05D004783 7.1e-54 214.2 134 75.4
Sopen04g033830 Solanum pennellii HOM05D004245 ORTHO05D004783 2.3e-44 182.6 91 100.0
Oeu029862.1 Olea europaea HOM05D004245 ORTHO05D004783 2.9e-39 165.6 107 73.8
Lalb_Chr10g0103901 Lupinus albus HOM05D004245 ORTHO05D004783 6.1e-37 157.9 137 62.0
TAR381G1372 Trochodendron aralioides HOM05D004245 ORTHO05D004783 3.0e-36 155.6 137 59.9
COL.COLO4_26330 Corchorus olitorius HOM05D004245 ORTHO05D004783 3.9e-36 155.2 137 60.6
Thecc.08G025300 Theobroma cacao HOM05D004245 ORTHO05D004783 8.7e-36 154.1 137 59.9
TWI12G0235 Tripterygium wilfordii HOM05D004245 ORTHO05D004783 8.7e-36 154.1 137 59.9
Migut.N00497 Erythranthe guttata HOM05D004245 ORTHO05D004783 1.1e-35 153.7 122 64.8
Phvul.008G243100 Phaseolus vulgaris HOM05D004245 ORTHO05D004783 1.1e-35 153.7 127 62.2
PGR031G3519 Punica granatum HOM05D004245 ORTHO05D004783 1.1e-35 153.7 126 64.3
QL02p008145 Quercus lobata HOM05D004245 ORTHO05D004783 1.1e-35 153.7 137 60.6
QL02p008410 Quercus lobata HOM05D004245 ORTHO05D004783 1.1e-35 153.7 137 60.6
RcHm_v2.0_Chr6g0300871 Rosa chinensis HOM05D004245 ORTHO05D004783 1.1e-35 153.7 121 64.5
VMungo0647G1970 Vigna mungo HOM05D004245 ORTHO05D004783 1.1e-35 153.7 127 62.2
Actinidia22552 Actinidia chinensis HOM05D004245 ORTHO05D004783 1.9e-35 152.9 122 63.1
Gohir.A05G194800 Gossypium hirsutum HOM05D004245 ORTHO05D004783 1.9e-35 152.9 137 59.9
Lalb_Chr17g0345751 Lupinus albus HOM05D004245 ORTHO05D004783 1.9e-35 152.9 138 58.0
Gohir.D05G198000 Gossypium hirsutum HOM05D004245 ORTHO05D004783 2.5e-35 152.5 137 59.9
MSTRG.22299 Avicennia marina HOM05D004245 ORTHO05D004783 4.3e-35 151.8 127 63.8
Duzib093G0228 Durio zibethinus HOM05D004245 ORTHO05D004783 4.3e-35 151.8 137 59.1
Sopen01g041550 Solanum pennellii HOM05D004245 ORTHO05D004783 4.3e-35 151.8 127 62.2
PGSC0003DMG400022502 Solanum tuberosum HOM05D004245 ORTHO05D004783 4.3e-35 151.8 127 62.2
TAR365G0431 Trochodendron aralioides HOM05D004245 ORTHO05D004783 4.3e-35 151.8 137 57.7
Ah.12g056070 Amaranthus hybridus HOM05D004245 ORTHO05D004783 5.7e-35 151.4 123 63.4
EL10Ac5g11904 Beta vulgaris HOM05D004245 ORTHO05D004783 5.7e-35 151.4 123 62.6
Gorai.009G203100 Gossypium raimondii HOM05D004245 ORTHO05D004783 5.7e-35 151.4 137 59.1
MD15G1031300 Malus domestica HOM05D004245 ORTHO05D004783 5.7e-35 151.4 151 55.0
Oeu029863.1 Olea europaea HOM05D004245 ORTHO05D004783 5.7e-35 151.4 137 59.1
Glyma.14G207800 Glycine max HOM05D004245 ORTHO05D004783 7.4e-35 151.0 135 59.3
Cc10_g03000 Coffea canephora HOM05D004245 ORTHO05D004783 9.7e-35 150.6 127 60.6
GSVIVG01009696001 Vitis vinifera HOM05D004245 ORTHO05D004783 9.7e-35 150.6 123 63.4
Potri.002G261900 Populus trichocarpa HOM05D004245 ORTHO05D004783 1.3e-34 150.2 127 63.0
Solyc01g097970.4 Solanum lycopersicum HOM05D004245 ORTHO05D004783 1.3e-34 150.2 127 61.4
Duzib116G0455 Durio zibethinus HOM05D004245 ORTHO05D004783 1.6e-34 149.8 137 59.1
HanXRQChr08g0223611 Helianthus annuus HOM05D004245 ORTHO05D004783 1.6e-34 149.8 123 63.4
Nn1g05030 Nelumbo nucifera HOM05D004245 ORTHO05D004783 1.6e-34 149.8 141 56.0
A06p20620 Brassica napus HOM05D004245 ORTHO05D004783 2.2e-34 149.4 122 61.5
CDE12G0639 Ceratophyllum demersum HOM05D004245 ORTHO05D004783 2.2e-34 149.4 124 60.5
HanXRQChr05g0151891 Helianthus annuus HOM05D004245 ORTHO05D004783 2.2e-34 149.4 123 63.4
TWI56G0048 Tripterygium wilfordii HOM05D004245 ORTHO05D004783 2.2e-34 149.4 137 56.9
C03p71110 Brassica napus HOM05D004245 ORTHO05D004783 3.7e-34 148.7 122 61.5
BolC3t19396H Brassica oleracea HOM05D004245 ORTHO05D004783 3.7e-34 148.7 122 61.5
BraA06t25141Z Brassica rapa HOM05D004245 ORTHO05D004783 3.7e-34 148.7 122 61.5
CANSAT11G0204 Cannabis sativa HOM05D004245 ORTHO05D004783 3.7e-34 148.7 121 63.6
Ciclev10002428m.g Citrus clementina HOM05D004245 ORTHO05D004783 3.7e-34 148.7 120 63.3
Eucgr.F01560 Eucalyptus grandis HOM05D004245 ORTHO05D004783 3.7e-34 148.7 126 60.3
MD08G1034400 Malus domestica HOM05D004245 ORTHO05D004783 3.7e-34 148.7 122 62.3
Manes.18G027901 Manihot esculenta HOM05D004245 ORTHO05D004783 3.7e-34 148.7 137 56.9
Medtr3g063110 Medicago truncatula HOM05D004245 ORTHO05D004783 3.7e-34 148.7 121 62.8
AT3G46940 Arabidopsis thaliana HOM05D004245 ORTHO05D004783 4.8e-34 148.3 122 62.3
MSTRG.1283 Avicennia marina HOM05D004245 ORTHO05D004783 4.8e-34 148.3 121 62.0
Oeu056187.1 Olea europaea HOM05D004245 ORTHO05D004783 4.8e-34 148.3 149 53.7
Cc00_g32610 Coffea canephora HOM05D004245 ORTHO05D004783 6.3e-34 147.9 122 62.3
Dinv36073 Davidia involucrata HOM05D004245 ORTHO05D004783 6.3e-34 147.9 122 63.9
Glyma.18G048400 Glycine max HOM05D004245 ORTHO05D004783 6.3e-34 147.9 121 61.2
MBI16_g37698_MAGBIO Magnolia biondii HOM05D004245 ORTHO05D004783 6.3e-34 147.9 147 55.8
Nn5g29570 Nelumbo nucifera HOM05D004245 ORTHO05D004783 6.3e-34 147.9 137 58.4
Oeu049959.1 Olea europaea HOM05D004245 ORTHO05D004783 6.3e-34 147.9 137 57.7
Oeu049960.1 Olea europaea HOM05D004245 ORTHO05D004783 6.3e-34 147.9 137 57.7
Sopen01g043550 Solanum pennellii HOM05D004245 ORTHO05D004783 6.3e-34 147.9 123 60.2
PGSC0003DMG400024725 Solanum tuberosum HOM05D004245 ORTHO05D004783 6.3e-34 147.9 123 61.0
TPR.G37404 Trifolium pratense HOM05D004245 ORTHO05D004783 6.3e-34 147.9 121 62.0
Aqoxy2G01756 Aquilegia oxysepala HOM05D004245 ORTHO05D004783 8.2e-34 147.5 122 62.3
THA.LOC104813208 Tarenaya hassleriana HOM05D004245 ORTHO05D004783 8.2e-34 147.5 121 62.0
CDE04G3793 Ceratophyllum demersum HOM05D004245 ORTHO05D004783 1.1e-33 147.1 122 61.5
CARHR155580 Cardamine hirsuta HOM05D004245 ORTHO05D004783 1.4e-33 146.7 122 62.3
CiPaw.15G077400 Carya illinoinensis HOM05D004245 ORTHO05D004783 1.4e-33 146.7 121 62.8
DCAR_020361 Daucus carota HOM05D004245 ORTHO05D004783 1.4e-33 146.7 124 58.1
Sc02g0006240 Simmondsia chinensis HOM05D004245 ORTHO05D004783 1.4e-33 146.7 121 62.0
Atru.chr13.494 Acer truncatum HOM05D004245 ORTHO05D004783 1.8e-33 146.4 123 60.2
MBI16_g37752_MAGBIO Magnolia biondii HOM05D004245 ORTHO05D004783 1.8e-33 146.4 120 62.5
TWI36G0248 Tripterygium wilfordii HOM05D004245 ORTHO05D004783 1.8e-33 146.4 138 56.5
GSVIVG01037336001 Vitis vinifera HOM05D004245 ORTHO05D004783 1.8e-33 146.4 137 56.9
Actinidia29827 Actinidia chinensis HOM05D004245 ORTHO05D004783 2.4e-33 146.0 121 59.5
AL5G26160 Arabidopsis lyrata HOM05D004245 ORTHO05D004783 2.4e-33 146.0 122 63.1
Ca_15096_v3 Cicer arietinum L. HOM05D004245 ORTHO05D004783 2.4e-33 146.0 121 62.8
Psat5g146640 Pisum sativum HOM05D004245 ORTHO05D004783 2.4e-33 146.0 121 62.8
Sp5g14800 Schrenkiella parvula HOM05D004245 ORTHO05D004783 2.4e-33 146.0 122 61.5
Lj4A41T61 Lonicera japonica HOM05D004245 ORTHO05D004783 3.1e-33 145.6 129 59.7
PSO832G4589 Papaver somniferum HOM05D004245 ORTHO05D004783 3.1e-33 145.6 142 55.6
AUR62027309 Chenopodium quinoa HOM05D004245 ORTHO05D004783 4.1e-33 145.2 121 61.2
Solyc01g100030.5.1 Solanum lycopersicum HOM05D004245 ORTHO05D004783 4.1e-33 145.2 123 58.5
TPR.G19056 Trifolium pratense HOM05D004245 ORTHO05D004783 4.1e-33 145.2 122 61.5
Ciclev10009684m.g Citrus clementina HOM05D004245 ORTHO05D004783 6.9e-33 144.4 120 60.8
CAN.G1273.28 Capsicum annuum HOM05D004245 ORTHO05D004783 9.1e-33 144.1 122 58.2
ATR0124G052 Amborella trichopoda HOM05D004245 ORTHO05D004783 1.2e-32 143.7 123 59.3
Thhalv10011147m.g Eutrema salsugineum HOM05D004245 ORTHO05D004783 1.2e-32 143.7 121 61.2
FvH4_2g39911 Fragaria vesca HOM05D004245 ORTHO05D004783 1.2e-32 143.7 137 58.4
Carub.0005s1316 Capsella rubella HOM05D004245 ORTHO05D004783 1.5e-32 143.3 126 58.7
CAN.G134.178 Capsicum annuum HOM05D004245 ORTHO05D004783 1.5e-32 143.3 119 63.0
Os03g0669100 Oryza sativa ssp. japonica HOM05D004245 ORTHO05D004783 1.5e-32 143.3 127 59.8
Prupe.1G380600 Prunus persica HOM05D004245 ORTHO05D004783 2.6e-32 142.5 121 61.2
Rhsim06G0034500 Rhododendron simsii HOM05D004245 ORTHO05D004783 3.4e-32 142.1 120 58.3
Atru.chr13.1763 Acer truncatum HOM05D004245 ORTHO05D004783 4.5e-32 141.7 123 60.2
Cpa.g.sc36.67 Carica papaya HOM05D004245 ORTHO05D004783 4.5e-32 141.7 120 60.8
Actinidia38010 Actinidia chinensis HOM05D004245 ORTHO05D004783 5.9e-32 141.4 121 57.9
AUR62007424 Chenopodium quinoa HOM05D004245 ORTHO05D004783 5.9e-32 141.4 116 63.8
ECA246G2445 Erigeron canadensis HOM05D004245 ORTHO05D004783 5.9e-32 141.4 118 62.7
Zm00001eb052270 Zea mays HOM05D004245 ORTHO05D004783 1.3e-31 140.2 127 57.5
Manes.05G161000 Manihot esculenta HOM05D004245 ORTHO05D004783 2.9e-31 139.0 129 55.8
SEGI_17618 Sequoiadendron giganteum HOM05D004245 ORTHO05D004783 3.8e-31 138.7 121 57.9
Aa31LG4G15890 Aethionema arabicum HOM05D004245 ORTHO05D004783 6.5e-31 137.9 122 59.0
AagrBONN_evm.TU.Sc2ySwM_117.1092 Anthoceros agrestis HOM05D004245 ORTHO05D004783 6.5e-31 137.9 122 59.8
CsaV3_2G028630 Cucumis sativus L. HOM05D004245 ORTHO05D004783 1.1e-30 137.1 120 59.2
SEGI_12681 Sequoiadendron giganteum HOM05D004245 ORTHO05D004783 1.1e-30 137.1 137 55.5
Rhsim07G0237700 Rhododendron simsii HOM05D004245 ORTHO05D004783 1.4e-30 136.7 156 50.0
MELO3C010935.2 Cucumis melo HOM05D004245 ORTHO05D004783 1.9e-30 136.3 120 59.2
Pp3c16_25660 Physcomitrium patens HOM05D004245 ORTHO05D004783 3.2e-30 135.6 120 58.3
HPP92_000905 Vanilla planifolia HOM05D004245 ORTHO05D004783 3.2e-30 135.6 120 57.5
CBR_g37457 Chara braunii HOM05D004245 ORTHO05D004783 4.2e-30 135.2 120 58.3
ClCG08G015180 Citrullus lanatus HOM05D004245 ORTHO05D004783 5.5e-30 134.8 144 51.4
Mapoly0133s0010 Marchantia polymorpha HOM05D004245 ORTHO05D004783 5.5e-30 134.8 120 55.0
Nitab4.5_0000110g0590 Nicotiana tabacum HOM05D004245 ORTHO05D004783 7.2e-30 134.4 148 53.4
SMO146G0275 Selaginella moellendorffii HOM05D004245 ORTHO05D004783 2.7e-29 132.5 120 55.8
Sabra04G0142000 Salix brachista HOM05D004298 ORTHO05D006236 3.6e-29 132.1 170 47.1
PSO764G0231 Papaver somniferum HOM05D004245 ORTHO05D004783 3.9e-28 128.6 141 48.9
MD08G1034500 Malus domestica HOM05D004245 ORTHO05D004783 5.1e-28 128.3 122 55.7
MCO05G374 Micromonas commoda HOM05D004245 ORTHO05D004783 5.1e-28 128.3 120 55.8
Sabra02G0198600 Salix brachista HOM05D004245 ORTHO05D004783 5.1e-28 128.3 148 51.4
Cre16.g667850 Chlamydomonas reinhardtii HOM05D004245 ORTHO05D004783 8.8e-28 127.5 120 57.5
PSO591G0217 Papaver somniferum HOM05D004245 ORTHO05D004783 8.8e-28 127.5 142 52.1
HPP92_000939 Vanilla planifolia HOM05D004245 ORTHO05D004783 1.1e-27 127.1 143 49.7
PRCOL_00002276 Prasinoderma coloniale HOM05D004245 ORTHO05D004783 1.0e-20 104.0 120 46.7
CBR_g21266 Chara braunii HOM05D004245 ORTHO05D004783 4.4e-19 98.6 122 45.1
CBR_g21272 Chara braunii HOM05D004245 ORTHO05D004783 3.1e-17 92.4 120 39.2
Cfa018144 Carpinus fangiana HOM05D004245 ORTHO05D004783 2.6e-16 89.4 78 57.7
SHI03308 Sapria himalayana HOM05D004245 ORTHO05D004783 8.5e-15 84.3 74 58.1
Atru.chr6.1642 Acer truncatum HOM05D004245 ORTHO05D004783 7.2e-14 81.3 78 57.7
Atru.chr6.1643 Acer truncatum HOM05D004245 ORTHO05D004783 1.2e-13 80.5 69 60.9
unitig_85.g27241 Utricularia gibba HOM05D004245 ORTHO05D004783 2.1e-13 79.7 63 61.9
SGA_v2.0_scaffold326G48710 Striga asiatica HOM05D004245 ORTHO05D004783 3.6e-13 79.0 82 51.2
Peaxi162Scf00037g01715 Petunia axillaris HOM05D004245 ORTHO05D004783 1.4e-12 77.0 74 55.4
vmacro04520 Vaccinium macrocarpon HOM05D004245 ORTHO05D004783 1.4e-12 77.0 63 61.9
Nitab4.5_0006179g0050 Nicotiana tabacum HOM05D004245 ORTHO05D004783 3.0e-12 75.9 89 47.2
unitig_578.g16734 Utricularia gibba HOM05D004245 ORTHO05D004783 3.0e-12 75.9 63 58.7
Nitab4.5_0002612g0110 Nicotiana tabacum HOM05D004245 ORTHO05D004783 5.2e-12 75.1 64 57.8
DCAR_020970 Daucus carota HOM05D004245 ORTHO05D004783 2.0e-11 73.2 59 62.7
Cfa018886 Carpinus fangiana HOM05D004245 ORTHO05D004783 4.4e-11 72.0 77 50.6
SHI09478 Sapria himalayana HOM05D004245 ORTHO05D004783 4.4e-11 72.0 70 51.4
Hund11091 Selenicereus undatus HOM05D004245 ORTHO05D004783 4.4e-11 72.0 75 52.0
Nitab4.5_0002361g0180 Nicotiana tabacum HOM05D004245 ORTHO05D004783 5.7e-11 71.6 58 62.1
Lsat_1_v5_gn_5_29181 Lactuca sativa HOM05D004245 ORTHO05D004783 2.8e-10 69.3 74 50.0
Lsat_1_v5_gn_8_78860 Lactuca sativa HOM05D004245 ORTHO05D004783 1.8e-09 66.6 65 53.8
Peaxi162Scf00225g00127 Petunia axillaris HOM05D004245 ORTHO05D004783 4.1e-09 65.5 58 55.2
Nitab4.5_0002840g0080 Nicotiana tabacum HOM05D004245 ORTHO05D004783 9.1e-09 64.3 58 56.9
Sed0016726 Sechium edule HOM05D004245 ORTHO05D004783 9.1e-09 64.3 82 46.3
Atru.chr2.1957 Acer truncatum HOM05D004245 ORTHO05D004783 3.5e-08 62.4 55 54.5
QL02p008415 Quercus lobata HOM05D000526 ORTHO05D004783 3.5e-08 62.4 56 53.6
Lsat_1_v5_gn_0_32861 Lactuca sativa HOM05D031264 ORTHO05D004783 1.7e-07 60.1 122 34.4
SHI20747 Sapria himalayana HOM05D003927 ORTHO05D004905 3.2e-06 55.8 56 50.0
Atru.chr13.1771 Acer truncatum HOM05D004245 ORTHO05D004783 4.2e-06 55.5 68 45.6


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