Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g080070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 3.1e-70 268.9 192 100.0
Sopen04g033660 Solanum pennellii HOM05D008139 ORTHO05D009872 3.0e-65 252.3 199 93.5
PGSC0003DMG400005169 Solanum tuberosum HOM05D008139 ORTHO05D009872 1.2e-58 230.3 192 77.1
Nitab4.5_0003246g0060 Nicotiana tabacum HOM05D008139 ORTHO05D009872 5.0e-28 128.6 201 42.8
CAN.G1126.30 Capsicum annuum HOM05D008139 ORTHO05D009872 3.2e-27 125.9 86 72.1
Nitab4.5_0000110g0510 Nicotiana tabacum HOM05D008139 ORTHO05D009872 8.3e-23 111.3 197 39.1
Peaxi162Scf00057g00045 Petunia axillaris HOM05D008139 ORTHO05D009872 2.0e-21 106.7 90 60.0
Nitab4.5_0000790g0110 Nicotiana tabacum HOM05D008139 ORTHO05D009872 1.4e-17 94.0 77 57.1
CAN.G1139.6 Capsicum annuum HOM05D008139 ORTHO05D009872 5.2e-17 92.0 87 50.6
Nitab4.5_0002296g0050 Nicotiana tabacum HOM05D008139 ORTHO05D009872 1.3e-15 87.4 68 58.8
SGA_v2.0_scaffold374G50235 Striga asiatica HOM05D008139 ORTHO05D009872 1.4e-14 84.0 82 43.9
PGSC0003DMG400045933 Solanum tuberosum HOM05D008139 ORTHO05D009872 3.1e-14 82.8 78 51.3
Solyc12g089070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 2.3e-12 76.6 87 43.7
Hma1.2p1_0249F.1_g102430 Hydrangea macrophylla HOM05D008139 ORTHO05D009872 3.8e-12 75.9 86 52.3
Potri.017G037500 Populus trichocarpa HOM05D008139 ORTHO05D009872 3.8e-12 75.9 84 47.6
Phvul.011G105800 Phaseolus vulgaris HOM05D008139 ORTHO05D009872 3.3e-11 72.8 90 44.4
Thecc.04G120400 Theobroma cacao HOM05D008139 ORTHO05D009872 4.3e-11 72.4 83 49.4
Gohir.D11G168166 Gossypium hirsutum HOM05D008139 ORTHO05D009872 5.6e-11 72.0 84 44.0
Gorai.007G179600 Gossypium raimondii HOM05D008139 ORTHO05D009872 5.6e-11 72.0 84 44.0
Lalb_Chr03g0028851 Lupinus albus HOM05D008139 ORTHO05D009872 7.3e-11 71.6 86 43.0
Duzib133G0708 Durio zibethinus HOM05D008139 ORTHO05D009872 1.6e-10 70.5 83 47.0
CSS0007820 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 2.8e-10 69.7 86 46.5
Cc10_g03180 Coffea canephora HOM05D008139 ORTHO05D009872 3.6e-10 69.3 76 44.7
Lsat_1_v5_gn_5_103860 Lactuca sativa HOM05D008139 ORTHO05D009872 3.6e-10 69.3 84 47.6
Lsat_1_v5_gn_8_128280 Lactuca sativa HOM05D008139 ORTHO05D009872 3.6e-10 69.3 84 47.6
Potri.007G122500 Populus trichocarpa HOM05D008139 ORTHO05D009872 3.6e-10 69.3 88 44.3
CSS0007440 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 4.7e-10 68.9 80 46.2
Gohir.A11G161900 Gossypium hirsutum HOM05D008139 ORTHO05D009872 8.0e-10 68.2 84 42.9
Lj3g0004995 Lotus japonicus HOM05D008139 ORTHO05D009872 8.0e-10 68.2 86 43.0
RcHm_v2.0_Chr2g0126901 Rosa chinensis HOM05D008139 ORTHO05D009872 8.0e-10 68.2 93 41.9
SGA_v2.0_scaffold48G18067 Striga asiatica HOM05D008139 ORTHO05D009872 1.0e-09 67.8 79 41.8
Cfa014432 Carpinus fangiana HOM05D008139 ORTHO05D009872 1.4e-09 67.4 81 45.7
DCAR_019772 Daucus carota HOM05D008139 ORTHO05D009872 1.4e-09 67.4 76 50.0
Manes.13G103000 Manihot esculenta HOM05D008139 ORTHO05D009872 1.4e-09 67.4 81 46.9
Nn1g07030 Nelumbo nucifera HOM05D008139 ORTHO05D009872 1.4e-09 67.4 83 44.6
Dinv02745 Davidia involucrata HOM05D008139 ORTHO05D009872 1.8e-09 67.0 70 50.0
Sabra17G0024400 Salix brachista HOM05D008139 ORTHO05D009872 2.3e-09 66.6 88 42.0
Atru.chr6.3157 Acer truncatum HOM05D008139 ORTHO05D009872 3.1e-09 66.2 94 40.4
PGR083G1842 Punica granatum HOM05D008139 ORTHO05D009872 3.1e-09 66.2 91 45.1
Medtr4g046720 Medicago truncatula HOM05D008139 ORTHO05D009872 4.0e-09 65.9 83 41.0
SalBow8G2406 Salvia bowleyana HOM05D008139 ORTHO05D009872 4.0e-09 65.9 77 41.6
SalBow8G2479 Salvia bowleyana HOM05D008139 ORTHO05D009872 4.0e-09 65.9 77 41.6
TWI36G0135 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 5.2e-09 65.5 84 40.5
Ciclev10017826m.g Citrus clementina HOM05D008139 ORTHO05D009872 6.8e-09 65.1 92 42.4
Migut.N00505 Erythranthe guttata HOM05D008139 ORTHO05D009872 6.8e-09 65.1 79 38.0
Prupe.3G131300 Prunus persica HOM05D008139 ORTHO05D009872 6.8e-09 65.1 84 42.9
Rhsim06G0158900 Rhododendron simsii HOM05D008139 ORTHO05D009872 6.8e-09 65.1 78 46.2
TAR626G0598 Trochodendron aralioides HOM05D008139 ORTHO05D009872 8.9e-09 64.7 80 45.0
Atru.chr6.3155 Acer truncatum HOM05D008139 ORTHO05D009872 1.2e-08 64.3 84 40.5
Migut.C00700 Erythranthe guttata HOM05D008139 ORTHO05D009872 1.2e-08 64.3 86 38.4
MD07G1098300 Malus domestica HOM05D008139 ORTHO05D009872 1.2e-08 64.3 86 43.0
CiPaw.04G117200 Carya illinoinensis HOM05D008139 ORTHO05D009872 1.5e-08 63.9 88 39.8
Prupe.2G122300 Prunus persica HOM05D008139 ORTHO05D009872 2.6e-08 63.2 95 40.0
ClCG02G001810 Citrullus lanatus HOM05D008139 ORTHO05D009872 3.4e-08 62.8 91 37.4
QL08p033688 Quercus lobata HOM05D008139 ORTHO05D009872 7.5e-08 61.6 81 43.2
TAR626G0589 Trochodendron aralioides HOM05D008139 ORTHO05D009872 1.3e-07 60.8 80 40.0
FAN02G4280 Fragaria x ananassa HOM05D008139 ORTHO05D009872 2.2e-07 60.1 84 40.5
Glyma.12G100900 Glycine max HOM05D008139 ORTHO05D009872 2.9e-07 59.7 86 40.7
Aqoxy4G01991 Aquilegia oxysepala HOM05D008139 ORTHO05D009872 3.7e-07 59.3 82 41.5
COL.COLO4_15724 Corchorus olitorius HOM05D008139 ORTHO05D009872 3.7e-07 59.3 91 40.7
Sed0019249 Sechium edule HOM05D008139 ORTHO05D009872 8.3e-07 58.2 87 34.5
TPR.G19049 Trifolium pratense HOM05D008139 ORTHO05D009872 8.3e-07 58.2 85 37.6
unitig_46.g17928 Utricularia gibba HOM05D008139 ORTHO05D009872 8.3e-07 58.2 76 40.8
TWI75G0563 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 1.1e-06 57.8 83 41.0
CsaV3_7G003730 Cucumis sativus L. HOM05D008139 ORTHO05D009872 1.4e-06 57.4 94 35.1
MELO3C018806.2 Cucumis melo HOM05D008139 ORTHO05D009872 2.4e-06 56.6 92 35.9
Eucgr.A01721 Eucalyptus grandis HOM05D008139 ORTHO05D009872 3.2e-06 56.2 87 36.8


User provided reference genes

Program Settings