Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 9.3e-184 646.7 328 100.0
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 2.3e-182 642.1 328 97.6
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.0e-162 575.9 328 83.8
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.6e-162 575.5 328 84.8
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 6.5e-161 570.9 328 90.5
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 7.0e-155 550.8 327 76.5
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.3e-153 546.6 325 79.4
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 6.5e-153 544.3 326 77.3
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 8.5e-153 543.9 288 89.2
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 4.2e-152 541.6 326 80.7
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 2.7e-151 538.9 324 76.5
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 3.6e-151 538.5 325 76.3
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 4.7e-151 538.1 323 75.2
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 1.8e-150 536.2 326 75.2
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 1.8e-150 536.2 324 75.9
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 4.0e-150 535.0 324 75.3
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 5.2e-150 534.6 328 74.7
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.3e-148 530.0 328 75.0
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 1.3e-148 530.0 324 75.0
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 1.7e-148 529.6 322 75.2
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 6.3e-148 527.7 328 82.6
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 4.1e-147 525.0 323 74.0
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.6e-146 523.1 324 73.8
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 1.1e-144 516.9 325 73.2
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 7.2e-144 514.2 323 71.8
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 3.6e-143 511.9 326 72.4
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 9.8e-141 503.8 288 79.2
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 1.3e-140 503.4 324 76.5
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.1e-139 500.4 323 75.2
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.4e-139 500.0 328 72.6
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.4e-139 499.2 323 71.8
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 7.0e-139 497.7 323 70.0
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 2.0e-138 496.1 323 70.0
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 2.7e-138 495.7 328 75.9
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 4.5e-138 495.0 323 69.7
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 4.5e-138 495.0 323 70.0
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 1.3e-137 493.4 323 69.0
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 4.7e-135 485.0 324 75.0
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.0e-134 483.8 323 73.4
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.4e-134 483.4 326 74.2
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 1.8e-134 483.0 328 74.1
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 1.8e-134 483.0 328 73.5
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 2.3e-134 482.6 326 74.2
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 3.0e-134 482.3 324 74.4
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.0e-134 481.9 325 72.3
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 6.8e-134 481.1 327 74.6
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 1.5e-133 479.9 326 73.9
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 3.4e-133 478.8 328 73.2
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 4.4e-133 478.4 328 72.9
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 4.4e-133 478.4 326 73.6
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.3e-132 476.9 326 73.6
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.7e-132 476.5 328 73.2
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 1.7e-132 476.5 324 73.5
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 2.9e-132 475.7 325 73.2
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 4.9e-132 474.9 328 73.5
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 6.4e-132 474.6 328 72.9
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 6.4e-132 474.6 324 72.8
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 2.4e-131 472.6 328 72.0
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 3.2e-131 472.2 328 71.3
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 7.0e-131 471.1 324 72.8
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 2.0e-130 469.5 328 71.6
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.0e-130 469.5 328 71.6
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 2.7e-130 469.2 330 72.1
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 1.0e-129 467.2 324 69.4
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 1.7e-129 466.5 327 65.1
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 5.0e-129 464.9 324 71.6
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 5.0e-129 464.9 328 71.0
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 5.0e-129 464.9 319 66.8
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 5.0e-129 464.9 252 84.1
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 6.6e-129 464.5 328 72.6
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 1.5e-128 463.4 328 72.3
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.5e-128 462.6 328 72.9
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 3.3e-128 462.2 367 65.1
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 4.3e-128 461.8 324 73.5
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 9.5e-128 460.7 328 69.5
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 1.2e-127 460.3 324 64.8
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 6.2e-127 458.0 335 66.0
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 1.8e-126 456.4 328 69.2
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 1.5e-125 453.4 283 72.4
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 2.0e-125 453.0 324 71.0
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 5.8e-125 451.4 328 69.2
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 1.3e-124 450.3 328 68.9
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 3.7e-124 448.7 325 69.5
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 1.1e-123 447.2 325 68.3
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.1e-123 447.2 325 68.6
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.9e-123 446.4 325 68.3
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 3.2e-123 445.7 322 69.3
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 5.0e-121 438.3 328 67.7
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 3.3e-120 435.6 329 66.6
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.7e-119 431.8 325 66.2
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 4.7e-119 431.8 323 67.2
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 5.2e-118 428.3 238 80.7
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 8.9e-118 427.6 260 74.6
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 3.7e-116 422.2 330 66.1
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.9e-115 419.9 325 59.1
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 6.6e-113 411.4 320 65.0
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 3.1e-110 402.5 311 65.6
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 3.4e-109 399.1 247 74.9
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 2.3e-105 386.3 328 62.2
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 3.3e-96 355.9 323 58.2
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 4.3e-96 355.5 263 71.5
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 9.6e-96 354.4 258 71.3
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 1.4e-94 350.5 318 56.9
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.1e-94 349.4 279 68.5
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 1.5e-85 320.5 385 42.6
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 4.5e-85 318.9 251 67.3
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 6.4e-84 315.1 228 64.5
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 6.9e-78 295.0 251 62.5
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 2.0e-69 266.9 328 43.3
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 2.3e-65 253.4 251 54.2
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 2.4e-62 243.4 191 62.8
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 9.4e-59 231.5 189 56.6
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.2e-58 231.1 138 75.4
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.2e-52 210.3 124 73.4
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 3.2e-51 206.5 126 73.0
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.2e-42 177.9 94 81.9
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-20 104.8 153 39.2
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 1.1e-19 101.7 87 63.2
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 5.6e-19 99.4 93 52.7
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 2.3e-17 94.0 85 50.6
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.7e-07 61.2 43 62.8
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 1.7e-07 61.2 55 58.2
Prupe.6G259700 Prunus persica HOM05D037056 ORTHO05D335045 3.7e-07 60.1 43 62.8
Prupe.1G327800 Prunus persica HOM05D037056 ORTHO05D335556 8.3e-07 58.9 43 62.8
Prupe.8G103600 Prunus persica HOM05D037056 ORTHO05D336041 2.4e-06 57.4 43 60.5
MELO3C023799.2 Cucumis melo HOM05D006600 ORTHO05D168989 9.2e-06 55.5 73 41.1


User provided reference genes

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