Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 5.7e-189 664.1 330 100.0
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 1.4e-184 649.4 330 97.6
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 1.3e-172 609.8 343 89.2
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 4.0e-166 588.2 331 88.8
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 7.5e-165 583.9 331 87.9
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 8.6e-153 543.9 324 83.0
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 1.9e-136 489.6 333 75.4
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 3.4e-125 452.2 341 66.6
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.7e-124 449.9 339 67.0
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 8.7e-121 437.6 339 65.2
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 1.1e-120 437.2 342 64.3
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 6.2e-119 431.4 344 65.1
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.1e-115 420.6 344 64.5
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 7.1e-115 417.9 331 64.0
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 3.9e-113 412.1 339 62.5
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 1.9e-112 409.8 328 61.0
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 6.2e-111 404.8 342 61.4
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 4.0e-110 402.1 342 61.7
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 1.2e-109 400.6 340 59.7
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 1.5e-109 400.2 335 62.1
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 3.4e-109 399.1 344 59.9
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 9.9e-109 397.5 335 59.7
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 1.1e-107 394.0 345 60.0
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.4e-107 393.7 338 60.1
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 3.2e-107 392.5 340 59.4
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 5.4e-107 391.7 342 58.8
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 2.1e-106 389.8 340 60.0
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 7.9e-106 387.9 347 59.9
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 1.0e-105 387.5 338 58.6
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 1.0e-105 387.5 351 57.8
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 2.3e-105 386.3 342 58.5
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.0e-105 386.0 340 59.1
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 3.0e-105 386.0 332 62.7
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 5.1e-105 385.2 342 57.9
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 6.7e-105 384.8 343 59.5
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 1.1e-104 384.0 339 60.5
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 2.5e-104 382.9 341 57.2
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 4.3e-104 382.1 343 58.3
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 2.1e-103 379.8 344 56.7
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.1e-103 379.8 343 59.8
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 1.4e-102 377.1 301 60.1
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 1.8e-102 376.7 341 58.4
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 5.8e-101 371.7 334 58.1
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.3e-100 370.5 355 56.9
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 2.9e-100 369.4 330 57.9
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 1.4e-99 367.1 326 58.0
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 3.2e-99 365.9 322 57.8
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 4.2e-99 365.5 335 57.3
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 5.5e-99 365.2 340 55.6
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.6e-98 363.6 339 55.5
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 3.5e-98 362.5 325 56.3
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 4.6e-98 362.1 320 58.4
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 6.0e-98 361.7 378 53.2
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 6.0e-98 361.7 345 55.4
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 1.0e-97 360.9 340 57.1
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 1.0e-97 360.9 343 55.7
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.8e-97 360.1 322 57.5
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 3.0e-97 359.4 332 55.4
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 1.9e-96 356.7 333 55.6
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 4.3e-96 355.5 342 56.7
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 2.1e-95 353.2 331 56.8
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 2.1e-95 353.2 276 63.8
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 2.8e-95 352.8 328 55.2
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 1.8e-94 350.1 338 53.3
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 3.1e-94 349.4 349 52.1
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 4.0e-94 349.0 340 53.8
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 6.9e-94 348.2 335 53.7
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.2e-93 347.4 347 52.7
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 2.0e-93 346.7 276 60.9
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 5.8e-93 345.1 335 53.4
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 3.8e-92 342.4 276 61.6
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 1.9e-91 340.1 342 53.2
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 1.9e-91 340.1 346 50.0
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 2.5e-91 339.7 295 57.3
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 1.0e-89 334.3 320 54.1
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 1.3e-89 334.0 304 57.9
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 5.1e-89 332.0 428 43.9
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 1.9e-88 330.1 286 58.4
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 9.7e-88 327.8 338 53.0
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 2.8e-87 326.2 304 54.3
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.1e-86 324.3 323 52.0
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 4.1e-86 322.4 274 58.4
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.5e-85 320.5 281 55.9
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 2.0e-85 320.1 322 52.5
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.1e-83 314.3 324 53.4
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 2.5e-83 313.2 289 54.3
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 5.3e-78 295.4 302 50.3
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 4.5e-77 292.4 328 50.0
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 3.0e-73 279.6 210 67.1
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.2e-69 267.7 210 65.2
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 1.3e-60 237.7 169 65.1
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 4.1e-54 216.1 238 51.3
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 3.5e-53 213.0 288 40.6
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 2.6e-48 196.8 174 55.2
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 8.6e-44 181.8 254 44.9
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.7e-37 160.2 134 55.2
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.5e-35 154.5 195 45.1
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 3.3e-35 153.3 257 35.8
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 4.0e-33 146.4 167 46.7
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 1.3e-31 141.4 235 38.3
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 2.2e-31 140.6 171 45.0
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 7.0e-30 135.6 342 31.0
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 6.6e-28 129.0 130 54.6
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 8.9e-25 118.6 106 55.7
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.2e-24 118.2 93 61.3
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 3.5e-21 106.7 114 50.9
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.7e-20 104.4 146 41.1
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 1.1e-19 101.7 126 47.6
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 1.9e-14 84.3 125 43.2
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 3.2e-14 83.6 85 43.5
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 1.8e-09 67.8 85 44.7
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 3.4e-08 63.5 51 56.9
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 3.8e-07 60.1 42 61.9
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 4.9e-07 59.7 67 46.3


User provided reference genes

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