Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 5.6e-212 740.7 389 100.0
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 2.8e-150 535.8 328 89.9
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 2.1e-121 439.9 251 95.2
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.1e-98 364.4 331 67.7
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 3.1e-93 346.3 339 64.3
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 1.2e-47 194.9 360 40.3
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.4e-45 188.0 352 42.0
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 2.7e-41 173.7 348 39.4
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 5.7e-39 166.0 332 38.3
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 3.3e-34 150.2 325 36.9
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 7.2e-34 149.1 351 36.8
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 3.0e-32 143.7 359 35.7
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 6.8e-32 142.5 366 35.0
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 2.9e-30 137.1 337 33.5
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 4.9e-30 136.3 378 33.1
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.1e-29 135.2 382 34.6
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.6e-28 131.3 385 30.9
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 2.0e-28 131.0 376 32.4
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 1.0e-27 128.6 353 34.6
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 3.0e-27 127.1 374 30.2
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 2.1e-25 120.9 367 32.4
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 2.1e-25 120.9 363 32.8
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 1.8e-24 117.9 335 32.2
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 7.5e-23 112.5 393 30.5
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.7e-22 110.2 364 31.9
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 3.7e-22 110.2 365 33.4
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 6.4e-22 109.4 387 30.0
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 7.0e-21 105.9 329 31.9
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 9.2e-21 105.5 315 34.0
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 1.6e-20 104.8 358 31.3
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 2.0e-20 104.4 362 31.2
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.7e-20 104.0 339 28.9
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 2.7e-20 104.0 354 29.4
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 3.9e-19 100.1 367 30.5
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 6.6e-19 99.4 411 29.7
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 6.6e-19 99.4 411 29.7
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 1.9e-18 97.8 361 31.0
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 2.5e-18 97.4 381 29.4
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 3.3e-18 97.1 361 29.6
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 4.3e-18 96.7 358 31.6
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 9.5e-18 95.5 366 31.4
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 9.5e-18 95.5 365 29.6
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 2.1e-17 94.4 369 26.8
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 2.8e-17 94.0 353 28.6
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 3.1e-16 90.5 270 32.2
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.1e-16 90.5 364 29.1
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 6.8e-16 89.4 371 28.8
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 8.9e-16 89.0 364 28.8
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.5e-15 88.2 361 29.9
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 2.0e-15 87.8 371 26.7
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 2.0e-15 87.8 393 28.2
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 2.6e-15 87.4 356 27.8
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 5.8e-15 86.3 328 30.5
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.7e-14 84.7 361 28.8
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.7e-14 84.7 369 28.5
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 1.7e-14 84.7 325 29.5
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 2.2e-14 84.3 353 28.0
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.4e-13 81.6 352 28.7
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 1.4e-13 81.6 383 26.6
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 3.2e-13 80.5 178 37.1
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 1.6e-12 78.2 365 24.9
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 2.1e-12 77.8 381 25.5
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 1.0e-11 75.5 388 27.1
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 3.0e-11 73.9 333 26.7
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 3.0e-11 73.9 114 38.6
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.9e-11 73.6 334 26.0
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 5.1e-11 73.2 359 27.9
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 6.6e-11 72.8 333 26.4
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.1e-10 72.0 192 32.3
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.3e-10 70.5 112 42.0
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 4.3e-10 70.1 328 25.0
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 1.2e-09 68.6 115 37.4
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.6e-09 68.2 370 26.5
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.6e-09 68.2 119 37.0
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 2.1e-09 67.8 366 25.1
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 3.6e-09 67.0 377 24.9
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 6.2e-09 66.2 135 37.8
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 3.1e-08 63.9 374 24.9
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 3.1e-08 63.9 336 27.4
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 4.0e-08 63.5 381 23.4
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.2e-07 62.0 360 26.7
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 1.5e-07 61.6 386 26.9
Migut.O00023 Erythranthe guttata HOM05D006874 ORTHO05D008334 2.0e-07 61.2 148 37.2
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 2.0e-07 61.2 375 24.3
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 2.6e-07 60.8 361 27.4
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 3.4e-07 60.5 336 28.3
TAR625G0319 Trochodendron aralioides HOM05D006874 ORTHO05D008334 5.8e-07 59.7 97 40.2
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 9.9e-07 58.9 361 25.8
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 6.4e-06 56.2 371 28.0


User provided reference genes

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