Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g077150.3 Solanum lycopersicum HOM05D006480 ORTHO05D008072 8.0e-70 266.9 130 100.0
Sopen04g030760 Solanum pennellii HOM05D006480 ORTHO05D008072 8.0e-70 266.9 130 100.0
PGSC0003DMG400004956 Solanum tuberosum HOM05D006480 ORTHO05D008072 8.8e-69 263.5 130 98.5
CAN.G416.48 Capsicum annuum HOM05D006480 ORTHO05D008072 2.0e-68 262.3 130 96.9
Nitab4.5_0001614g0080 Nicotiana tabacum HOM05D006480 ORTHO05D008072 3.7e-67 258.1 130 94.6
Peaxi162Scf00628g00517 Petunia axillaris HOM05D006480 ORTHO05D008072 5.3e-66 254.2 130 93.8
Cc10_g07920 Coffea canephora HOM05D006480 ORTHO05D008072 9.8e-60 233.4 128 85.9
Actinidia10245 Actinidia chinensis HOM05D006480 ORTHO05D008072 4.8e-59 231.1 127 84.3
Hma1.2p1_1068F.1_g253990 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 4.8e-59 231.1 127 85.0
Manes.18G039100 Manihot esculenta HOM05D006480 ORTHO05D008072 6.3e-59 230.7 127 85.0
MSTRG.25010 Avicennia marina HOM05D006480 ORTHO05D008072 8.3e-59 230.3 128 83.6
Dinv01222 Davidia involucrata HOM05D006480 ORTHO05D008072 3.1e-58 228.4 127 84.3
Psat5g019760 Pisum sativum HOM05D006480 ORTHO05D008072 3.1e-58 228.4 128 82.8
Migut.N02813 Erythranthe guttata HOM05D006480 ORTHO05D008072 4.1e-58 228.0 128 83.6
Glyma.06G089400 Glycine max HOM05D006480 ORTHO05D008072 4.1e-58 228.0 127 84.3
Eucgr.F02200 Eucalyptus grandis HOM05D006480 ORTHO05D008072 5.4e-58 227.6 127 85.0
Lj1g0003564 Lotus japonicus HOM05D006480 ORTHO05D008072 7.0e-58 227.3 127 83.5
Ciclev10002836m.g Citrus clementina HOM05D006480 ORTHO05D008072 1.6e-57 226.1 127 84.3
Lalb_Chr11g0064651 Lupinus albus HOM05D006480 ORTHO05D008072 1.6e-57 226.1 127 83.5
Glyma.04G087700 Glycine max HOM05D006480 ORTHO05D008072 2.7e-57 225.3 127 82.7
Potri.002G112700 Populus trichocarpa HOM05D006480 ORTHO05D008072 3.5e-57 224.9 130 82.3
Cpa.g.sc160.14 Carica papaya HOM05D006480 ORTHO05D008072 5.9e-57 224.2 127 82.7
Gohir.D06G025000 Gossypium hirsutum HOM05D006480 ORTHO05D008072 7.7e-57 223.8 130 80.0
Phvul.009G113300 Phaseolus vulgaris HOM05D006480 ORTHO05D008072 1.3e-56 223.0 127 81.1
CiPaw.15G154000 Carya illinoinensis HOM05D006480 ORTHO05D008072 1.7e-56 222.6 127 81.9
Medtr3g110600 Medicago truncatula HOM05D006480 ORTHO05D008072 1.7e-56 222.6 127 81.9
Psat0s2525g0120 Pisum sativum HOM05D006480 ORTHO05D008072 1.7e-56 222.6 127 81.9
SGA_v2.0_scaffold152G36869 Striga asiatica HOM05D006480 ORTHO05D008072 1.7e-56 222.6 127 83.5
SalBow7G2271 Salvia bowleyana HOM05D006480 ORTHO05D008072 2.3e-56 222.2 127 82.7
Gohir.A05G213700 Gossypium hirsutum HOM05D006480 ORTHO05D008072 3.8e-56 221.5 127 80.3
Manes.05G185600 Manihot esculenta HOM05D006480 ORTHO05D008072 3.8e-56 221.5 127 81.1
CsaV3_3G048380 Cucumis sativus L. HOM05D006480 ORTHO05D008072 5.0e-56 221.1 127 81.1
Duzib093G0124 Durio zibethinus HOM05D006480 ORTHO05D008072 5.0e-56 221.1 127 79.5
Duzib116G0020 Durio zibethinus HOM05D006480 ORTHO05D008072 5.0e-56 221.1 127 81.1
Duzib116G0295 Durio zibethinus HOM05D006480 ORTHO05D008072 5.0e-56 221.1 127 81.1
Nn5g30706 Nelumbo nucifera HOM05D006480 ORTHO05D008072 8.6e-56 220.3 126 81.7
Gohir.D05G217100 Gossypium hirsutum HOM05D006480 ORTHO05D008072 1.1e-55 219.9 127 80.3
Thecc.08G081100 Theobroma cacao HOM05D006480 ORTHO05D008072 1.5e-55 219.5 127 80.3
TPR.G12422 Trifolium pratense HOM05D006480 ORTHO05D008072 1.5e-55 219.5 127 81.1
Sed0011969 Sechium edule HOM05D006480 ORTHO05D008072 2.5e-55 218.8 127 80.3
PGR031G1285 Punica granatum HOM05D006480 ORTHO05D008072 3.3e-55 218.4 123 82.1
TWI56G0589 Tripterygium wilfordii HOM05D006480 ORTHO05D008072 3.3e-55 218.4 127 79.5
Ca_30083_v3 Cicer arietinum L. HOM05D006480 ORTHO05D008072 4.2e-55 218.0 127 80.3
Rhsim07G0215700 Rhododendron simsii HOM05D006480 ORTHO05D008072 4.2e-55 218.0 137 75.9
Aqoxy6G01530 Aquilegia oxysepala HOM05D006480 ORTHO05D008072 5.5e-55 217.6 122 83.6
Dinv16062 Davidia involucrata HOM05D006480 ORTHO05D008072 1.2e-54 216.5 122 82.8
GSVIVG01009268001 Vitis vinifera HOM05D006480 ORTHO05D008072 1.2e-54 216.5 123 83.7
MBI16_g24165_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 2.1e-54 215.7 121 81.0
Ah.05g166870 Amaranthus hybridus HOM05D006480 ORTHO05D008072 4.7e-54 214.5 127 78.7
MD05G1108500 Malus domestica HOM05D006480 ORTHO05D008072 6.1e-54 214.2 122 82.0
HanXRQChr10g0293651 Helianthus annuus HOM05D006480 ORTHO05D008072 8.0e-54 213.8 122 81.1
Prupe.8G152200 Prunus persica HOM05D006480 ORTHO05D008072 8.0e-54 213.8 122 82.8
FvH4_2g03000 Fragaria vesca HOM05D006480 ORTHO05D008072 1.0e-53 213.4 122 82.0
FAN15G0464 Fragaria x ananassa HOM05D006480 ORTHO05D008072 1.0e-53 213.4 122 82.0
Os12g0633200 Oryza sativa ssp. japonica HOM05D006480 ORTHO05D008072 1.4e-53 213.0 121 81.8
THA.LOC104816778 Tarenaya hassleriana HOM05D006480 ORTHO05D008072 1.8e-53 212.6 127 77.2
MBI16_g31814_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 2.3e-53 212.2 121 80.2
Hma1.2p1_2654F.1_g326220 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 3.0e-53 211.8 122 81.1
Lsat_1_v5_gn_5_111841 Lactuca sativa HOM05D006480 ORTHO05D008072 4.0e-53 211.5 122 79.5
RcHm_v2.0_Chr6g0247791 Rosa chinensis HOM05D006480 ORTHO05D008072 5.2e-53 211.1 129 78.3
AL1G20730 Arabidopsis lyrata HOM05D006480 ORTHO05D008072 1.5e-52 209.5 127 78.0
Sc15g0005270 Simmondsia chinensis HOM05D006480 ORTHO05D008072 1.5e-52 209.5 127 76.4
FAN20G1015 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.6e-52 208.8 122 80.3
HPP92_019513 Vanilla planifolia HOM05D006480 ORTHO05D008072 2.6e-52 208.8 125 77.6
AT1G10030 Arabidopsis thaliana HOM05D006480 ORTHO05D008072 3.4e-52 208.4 127 77.2
arahy.Tifrunner.gnm1.ann1.2A26X2 Arachis hypogaea HOM05D006480 ORTHO05D008072 3.4e-52 208.4 127 74.8
ECA234G4602 Erigeron canadensis HOM05D006480 ORTHO05D008072 4.4e-52 208.0 128 76.6
Zm00001eb032930 Zea mays HOM05D006480 ORTHO05D008072 9.8e-52 206.8 118 81.4
ClCG11G014970 Citrullus lanatus HOM05D006480 ORTHO05D008072 1.3e-51 206.5 163 65.0
Zm00001eb282130 Zea mays HOM05D006480 ORTHO05D008072 1.7e-51 206.1 118 82.2
EL10Ac1g02330 Beta vulgaris HOM05D006480 ORTHO05D008072 2.2e-51 205.7 127 75.6
Gorai.009G223900 Gossypium raimondii HOM05D006480 ORTHO05D008072 2.8e-51 205.3 119 79.8
PSO675G8575 Papaver somniferum HOM05D006480 ORTHO05D008072 2.8e-51 205.3 122 77.0
PSO541G2150 Papaver somniferum HOM05D006480 ORTHO05D008072 4.9e-51 204.5 122 77.0
CANSAT25G0792 Cannabis sativa HOM05D006480 ORTHO05D008072 6.3e-51 204.1 129 77.5
CARHR010140 Cardamine hirsuta HOM05D006480 ORTHO05D008072 2.4e-50 202.2 127 73.2
Carub.0001s0945 Capsella rubella HOM05D006480 ORTHO05D008072 9.2e-50 200.3 127 74.8
Thhalv10009099m.g Eutrema salsugineum HOM05D006480 ORTHO05D008072 2.0e-49 199.1 127 74.0
BcaC05g24816 Brassica carinata HOM05D006480 ORTHO05D008072 2.7e-49 198.7 127 73.2
A06p06730 Brassica napus HOM05D006480 ORTHO05D008072 2.7e-49 198.7 127 73.2
BcaC05g24814 Brassica carinata HOM05D006480 ORTHO05D008072 1.0e-48 196.8 127 72.4
C05p08210 Brassica napus HOM05D006480 ORTHO05D008072 1.0e-48 196.8 127 72.4
BcaC07g38564 Brassica carinata HOM05D006480 ORTHO05D008072 1.7e-48 196.1 127 73.2
Sp1g08680 Schrenkiella parvula HOM05D006480 ORTHO05D008072 1.7e-48 196.1 127 71.7
vmacro21395 Vaccinium macrocarpon HOM05D006480 ORTHO05D008072 5.0e-48 194.5 108 85.2
A08p34230 Brassica napus HOM05D006480 ORTHO05D008072 1.1e-47 193.4 127 72.4
BraA08t35335Z Brassica rapa HOM05D006480 ORTHO05D008072 1.1e-47 193.4 127 72.4
QL12p040680 Quercus lobata HOM05D006480 ORTHO05D008072 1.1e-47 193.4 112 83.9
Sabra02G0089000 Salix brachista HOM05D006480 ORTHO05D008072 1.1e-47 193.4 112 82.1
VMungo1309G2678 Vigna mungo HOM05D006480 ORTHO05D008072 2.5e-47 192.2 142 67.6
BolC5t29573H Brassica oleracea HOM05D006480 ORTHO05D008072 4.3e-47 191.4 130 70.8
Oeu000749.3 Olea europaea HOM05D006480 ORTHO05D008072 4.3e-47 191.4 111 82.0
MELO3C003481.2 Cucumis melo HOM05D006480 ORTHO05D008072 7.3e-47 190.7 108 84.3
BolC8t48966H Brassica oleracea HOM05D006480 ORTHO05D008072 1.6e-46 189.5 129 71.3
Atru.chr13.908 Acer truncatum HOM05D006480 ORTHO05D008072 2.1e-46 189.1 108 83.3
MD10G1112500 Malus domestica HOM05D006480 ORTHO05D008072 2.8e-46 188.7 125 72.0
FAN24G1468 Fragaria x ananassa HOM05D006480 ORTHO05D008072 4.7e-46 188.0 129 72.1
Gorai.010G029400 Gossypium raimondii HOM05D006480 ORTHO05D008072 1.0e-45 186.8 108 80.6
Hund05252 Selenicereus undatus HOM05D006480 ORTHO05D008072 1.0e-45 186.8 111 79.3
Gohir.A06G027600 Gossypium hirsutum HOM05D006480 ORTHO05D008072 5.2e-45 184.5 107 80.4
Nitab4.5_0002415g0030 Nicotiana tabacum HOM05D006480 ORTHO05D008072 6.8e-45 184.1 92 96.7
FAN27G3220 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.0e-44 182.6 108 80.6
Lj5A222T80 Lonicera japonica HOM05D006480 ORTHO05D008072 3.4e-44 181.8 109 80.7
arahy.Tifrunner.gnm1.ann1.27XHB7 Arachis hypogaea HOM05D006480 ORTHO05D008072 4.4e-44 181.4 119 71.4
C08p13360 Brassica napus HOM05D006480 ORTHO05D008072 7.5e-44 180.6 128 68.8
BraA06t23887Z Brassica rapa HOM05D006480 ORTHO05D008072 1.7e-43 179.5 162 56.8
Mapoly0019s0092 Marchantia polymorpha HOM05D006480 ORTHO05D008072 1.1e-42 176.8 124 66.1
Aa31LG1G4870 Aethionema arabicum HOM05D006480 ORTHO05D008072 4.6e-41 171.4 107 76.6
Thecc.02G032200 Theobroma cacao HOM05D006480 ORTHO05D008072 1.3e-40 169.9 125 64.8
Dinv09524 Davidia involucrata HOM05D006480 ORTHO05D008072 1.9e-39 166.0 99 80.8
SMO112G0018 Selaginella moellendorffii HOM05D006480 ORTHO05D008072 2.5e-39 165.6 110 71.8
CARHR010030 Cardamine hirsuta HOM05D006480 ORTHO05D008072 7.8e-33 144.1 89 71.9
AagrBONN_evm.TU.Sc2ySwM_228.4946 Anthoceros agrestis HOM05D006480 ORTHO05D008072 1.9e-31 139.4 116 56.0
Zm00001eb116080 Zea mays HOM05D006480 ORTHO05D008072 4.0e-29 131.7 120 55.8
Zm00001eb116100 Zea mays HOM05D006480 ORTHO05D008072 4.0e-29 131.7 120 55.8
Zm00001eb129300 Zea mays HOM05D006480 ORTHO05D008072 9.9e-28 127.1 120 52.5
Zm00001eb129140 Zea mays HOM05D006480 ORTHO05D008072 1.4e-26 123.2 120 52.5
Zm00001eb409710 Zea mays HOM05D006480 ORTHO05D008072 5.4e-26 121.3 118 50.8
CBR_g29820 Chara braunii HOM05D006480 ORTHO05D008072 2.7e-25 119.0 119 44.5
CBR_g8921 Chara braunii HOM05D001598 ORTHO05D002757 5.1e-24 114.8 119 43.7
Pp3c19_15780 Physcomitrium patens HOM05D006480 ORTHO05D008072 1.9e-23 112.8 87 58.6
Duzib041G0452 Durio zibethinus HOM05D006480 ORTHO05D008072 7.3e-23 110.9 75 68.0
Zm00001eb129210 Zea mays HOM05D006480 ORTHO05D008072 4.7e-22 108.2 108 50.9


User provided reference genes

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