Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g074770.2 Solanum lycopersicum HOM05D012586 ORTHO05D012196 2.0e-94 349.4 210 100.0
PGSC0003DMG400030842 Solanum tuberosum HOM05D012586 ORTHO05D012196 3.2e-76 288.9 194 92.3
Nitab4.5_0007336g0010 Nicotiana tabacum HOM05D012586 ORTHO05D012196 1.2e-54 217.2 202 72.3
Nitab4.5_0003374g0020 Nicotiana tabacum HOM05D012586 ORTHO05D012196 8.7e-50 201.1 164 78.7
Peaxi162Scf00139g00016 Petunia axillaris HOM05D012586 ORTHO05D012196 3.1e-31 139.4 117 73.5
MSTRG.25558 Avicennia marina HOM05D012586 ORTHO05D012196 3.0e-18 96.3 190 49.5
Oeu024506.2 Olea europaea HOM05D012586 ORTHO05D012196 2.5e-17 93.2 143 52.4
Oeu041264.1 Olea europaea HOM05D012586 ORTHO05D012196 6.5e-13 78.6 129 52.7
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.4e-12 77.4 221 38.5
Migut.E00997 Erythranthe guttata HOM05D012586 ORTHO05D012196 4.2e-12 75.9 143 49.7
SGA_v2.0_scaffold37G14856 Striga asiatica HOM05D012586 ORTHO05D012196 2.7e-11 73.2 97 60.8
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 6.1e-11 72.0 201 40.3
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 6.1e-11 72.0 198 40.9
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.0e-10 71.2 230 37.4
Migut.E01141 Erythranthe guttata HOM05D012586 ORTHO05D012196 2.3e-10 70.1 163 44.2
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 1.5e-09 67.4 125 45.6
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 2.0e-09 67.0 200 41.5
Migut.A00852 Erythranthe guttata HOM05D012586 ORTHO05D012196 2.0e-09 67.0 153 43.1
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 4.4e-09 65.9 158 43.7
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 5.7e-09 65.5 196 39.3
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 5.7e-09 65.5 111 50.5
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 1.7e-08 63.9 205 36.1
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 3.7e-08 62.8 191 39.8
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 4.8e-08 62.4 149 43.6
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.4e-07 60.8 192 38.5
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 2.4e-07 60.1 179 33.5
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.1e-07 59.7 139 38.8
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 4.1e-07 59.3 124 46.0
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 5.3e-07 58.9 138 40.6
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 7.0e-07 58.5 150 37.3
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.0e-07 58.5 157 37.6
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.0e-07 58.5 157 38.2
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 9.1e-07 58.2 149 45.6
Lj4C95T1 Lonicera japonica HOM05D004728 ORTHO05D002375 9.1e-07 58.2 69 44.9
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 1.2e-06 57.8 106 50.9
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 1.2e-06 57.8 151 41.1
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 1.5e-06 57.4 181 38.7
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.5e-06 57.4 157 36.9
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 2.0e-06 57.0 188 36.2
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.6e-06 56.6 116 45.7
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 2.6e-06 56.6 219 26.5
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 2.6e-06 56.6 135 42.2
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 5.9e-06 55.5 231 33.8
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 5.9e-06 55.5 117 41.9
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 7.7e-06 55.1 149 45.0
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 7.7e-06 55.1 107 43.9
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.7e-06 55.1 107 43.9
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 7.7e-06 55.1 117 38.5
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 7.7e-06 55.1 203 37.4
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 7.7e-06 55.1 167 40.7


User provided reference genes

Program Settings