Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g074680.1 Solanum lycopersicum HOM05D010872 ORTHO05D004477 7.5e-65 250.8 166 100.0
Sopen04g029650 Solanum pennellii HOM05D010872 ORTHO05D013672 1.3e-37 160.2 152 82.9
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.7e-16 90.1 153 49.7
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 5.0e-16 88.6 153 49.0
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 7.2e-15 84.7 165 53.9
PGSC0003DMG400017769 Solanum tuberosum HOM05D059644 ORTHO05D004477 2.7e-14 82.8 152 52.6
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 1.1e-12 77.4 152 38.2
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.0e-12 76.6 153 49.7
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 5.7e-12 75.1 180 49.4
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 7.4e-12 74.7 167 38.3
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 9.7e-12 74.3 156 43.6
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 3.7e-11 72.4 149 49.0
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 3.7e-11 72.4 154 51.9
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 4.8e-11 72.0 154 45.5
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 8.2e-11 71.2 157 44.6
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 1.4e-10 70.5 147 53.1
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 2.4e-10 69.7 157 52.2
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 2.4e-10 69.7 157 52.2
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 4.1e-10 68.9 158 47.5
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 4.1e-10 68.9 133 49.6
Ciclev10002675m.g Citrus clementina HOM05D008046 ORTHO05D004477 5.3e-10 68.6 174 33.9
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 9.1e-10 67.8 149 34.9
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 1.2e-09 67.4 159 45.9
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.5e-09 67.0 135 37.0
Sopen06g012470 Solanum pennellii HOM05D046744 ORTHO05D051269 2.0e-09 66.6 161 34.8
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 7.7e-09 64.7 164 47.0
AL1G49920 Arabidopsis lyrata HOM05D010872 ORTHO05D013672 1.3e-08 63.9 43 60.5
AT1G35210 Arabidopsis thaliana HOM05D010872 ORTHO05D013672 1.3e-08 63.9 43 60.5
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.3e-08 63.9 163 32.5
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.3e-08 63.9 163 32.5
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 1.3e-08 63.9 159 52.8
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 1.3e-08 63.9 165 44.2
CARHR287280 Cardamine hirsuta HOM05D010872 ORTHO05D013672 1.7e-08 63.5 42 61.9
Thhalv10001870m.g Eutrema salsugineum HOM05D010872 ORTHO05D013672 1.7e-08 63.5 44 59.1
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 2.2e-08 63.2 140 53.6
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 2.2e-08 63.2 144 34.0
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 2.2e-08 63.2 143 34.3
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.9e-08 62.8 146 35.6
TWI36G0888 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 2.9e-08 62.8 160 47.5
Carub.0001s3286 Capsella rubella HOM05D010872 ORTHO05D013672 3.8e-08 62.4 53 56.6
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 3.8e-08 62.4 143 32.9
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 5.0e-08 62.0 128 36.7
Sp1g29940 Schrenkiella parvula HOM05D010872 ORTHO05D013672 5.0e-08 62.0 44 56.8
Gohir.A01G132600 Gossypium hirsutum HOM05D008046 ORTHO05D004477 6.5e-08 61.6 120 40.0
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 6.5e-08 61.6 128 36.7
Aa31LG6G8650 Aethionema arabicum HOM05D010872 ORTHO05D013672 8.5e-08 61.2 40 67.5
CSS0043643 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 8.5e-08 61.2 170 37.1
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 8.5e-08 61.2 146 32.2
unitig_32.g11784 Utricularia gibba HOM05D008046 ORTHO05D004477 8.5e-08 61.2 135 38.5
BcaB03g13666 Brassica carinata HOM05D010872 ORTHO05D013672 1.4e-07 60.5 46 50.0
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 1.4e-07 60.5 175 46.3
A05p23830 Brassica napus HOM05D010872 ORTHO05D013672 1.9e-07 60.1 46 50.0
BraA05t21254Z Brassica rapa HOM05D010872 ORTHO05D013672 1.9e-07 60.1 46 50.0
Sopen12g029780 Solanum pennellii HOM05D059644 ORTHO05D004477 1.9e-07 60.1 51 64.7
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 3.2e-07 59.3 139 33.8
Lalb_Chr23g0270371 Lupinus albus HOM05D008046 ORTHO05D004477 4.2e-07 58.9 149 48.3
PGSC0003DMG400028893 Solanum tuberosum HOM05D000121 ORTHO05D000102 4.2e-07 58.9 55 58.2
BcaC05g27742 Brassica carinata HOM05D010872 ORTHO05D013672 5.5e-07 58.5 46 50.0
C05p37280 Brassica napus HOM05D010872 ORTHO05D013672 5.5e-07 58.5 46 50.0
BolC5t32474H Brassica oleracea HOM05D010872 ORTHO05D013672 5.5e-07 58.5 46 50.0
ClCG11G014290 Citrullus lanatus HOM05D026294 ORTHO05D004477 7.2e-07 58.2 140 52.9
Migut.K01109 Erythranthe guttata HOM05D008046 ORTHO05D004477 7.2e-07 58.2 162 33.3
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 9.4e-07 57.8 161 37.9
Gorai.002G141100 Gossypium raimondii HOM05D008046 ORTHO05D004477 1.2e-06 57.4 119 47.9
CSS0015684 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.6e-06 57.0 172 47.7
Duzib093G0605 Durio zibethinus HOM05D008046 ORTHO05D004477 1.6e-06 57.0 162 49.4
THA.LOC104816630 Tarenaya hassleriana HOM05D010872 ORTHO05D013672 1.6e-06 57.0 131 45.8
Glyma.02G209200 Glycine max HOM05D008046 ORTHO05D004477 3.6e-06 55.8 62 51.6
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 6.1e-06 55.1 159 47.8
Glyma.14G177400 Glycine max HOM05D008046 ORTHO05D004477 6.1e-06 55.1 63 49.2
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 6.1e-06 55.1 150 42.7
PSO700G0164 Papaver somniferum HOM05D055938 ORTHO05D050202 6.1e-06 55.1 163 36.2
FAN08G1425 Fragaria x ananassa HOM05D018381 ORTHO05D004477 7.9e-06 54.7 175 28.6


User provided reference genes

Program Settings