Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g074260.1 Solanum lycopersicum HOM05D002925 ORTHO05D003247 2.6e-59 231.9 119 100.0
Sopen02g012230 Solanum pennellii HOM05D002925 ORTHO05D003247 1.0e-26 123.6 151 53.0
Sopen02g012270 Solanum pennellii HOM05D002925 ORTHO05D003247 1.8e-23 112.8 116 60.3
Sopen02g012380 Solanum pennellii HOM05D002925 ORTHO05D003247 5.1e-23 111.3 136 51.5
PGSC0003DMG400036857 Solanum tuberosum HOM05D002925 ORTHO05D003247 7.4e-22 107.5 151 47.7
Sopen04g029390 Solanum pennellii HOM05D002925 ORTHO05D003247 6.1e-16 87.8 90 56.7
PGSC0003DMG400006417 Solanum tuberosum HOM05D002925 ORTHO05D003247 6.1e-16 87.8 90 56.7
Solyc04g074250.3 Solanum lycopersicum HOM05D002925 ORTHO05D003247 1.0e-15 87.0 69 65.2
Nitab4.5_0000232g0050 Nicotiana tabacum HOM05D002925 ORTHO05D003247 6.3e-13 77.8 118 42.4
Nitab4.5_0006616g0010 Nicotiana tabacum HOM05D002925 ORTHO05D003247 3.1e-12 75.5 121 43.0
MSTRG.24975 Avicennia marina HOM05D002925 ORTHO05D003247 1.3e-10 70.1 88 47.7
Migut.C00133 Erythranthe guttata HOM05D002925 ORTHO05D003247 1.7e-10 69.7 55 63.6
unitig_8.g5045 Utricularia gibba HOM05D002925 ORTHO05D003247 1.7e-10 69.7 79 49.4
SGA_v2.0_scaffold74G24580 Striga asiatica HOM05D002925 ORTHO05D003247 5.0e-10 68.2 69 50.7
Haze_22282 Corylus avellana HOM05D002925 ORTHO05D003247 1.4e-09 66.6 78 51.3
Cc10_g07100 Coffea canephora HOM05D002925 ORTHO05D003247 1.9e-09 66.2 89 44.9
Dinv14338 Davidia involucrata HOM05D002925 ORTHO05D003247 2.5e-09 65.9 77 51.9
Oeu029761.1 Olea europaea HOM05D002925 ORTHO05D003247 2.5e-09 65.9 70 51.4
Dinv44782 Davidia involucrata HOM05D002925 ORTHO05D003247 3.2e-09 65.5 79 49.4
Peaxi162Scf00392g00416 Petunia axillaris HOM05D002925 ORTHO05D003247 3.2e-09 65.5 72 54.2
Cfa013644 Carpinus fangiana HOM05D002925 ORTHO05D003247 7.2e-09 64.3 70 52.9
Actinidia33129 Actinidia chinensis HOM05D002925 ORTHO05D003247 1.2e-08 63.5 79 48.1
GSVIVG01009040001 Vitis vinifera HOM05D002925 ORTHO05D003247 1.2e-08 63.5 78 44.9
CSS0032438 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 2.1e-08 62.8 81 49.4
CiPaw.07G178900 Carya illinoinensis HOM05D002925 ORTHO05D003247 2.7e-08 62.4 105 45.7
MBI02_g36599_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 2.7e-08 62.4 73 47.9
PGR031G1025 Punica granatum HOM05D002925 ORTHO05D003247 2.7e-08 62.4 71 53.5
SalBow7G1697 Salvia bowleyana HOM05D002925 ORTHO05D003247 2.7e-08 62.4 93 44.1
Ah.05g169890 Amaranthus hybridus HOM05D002925 ORTHO05D003247 4.7e-08 61.6 84 44.0
RcHm_v2.0_Chr7g0243951 Rosa chinensis HOM05D002925 ORTHO05D003247 4.7e-08 61.6 73 50.7
Hund26967 Selenicereus undatus HOM05D002925 ORTHO05D003247 4.7e-08 61.6 74 50.0
EL10Ac1g01207 Beta vulgaris HOM05D002925 ORTHO05D003247 6.1e-08 61.2 64 54.7
AUR62018927 Chenopodium quinoa HOM05D002925 ORTHO05D003247 6.1e-08 61.2 64 53.1
AUR62027772 Chenopodium quinoa HOM05D002925 ORTHO05D003247 6.1e-08 61.2 64 53.1
Lsat_1_v5_gn_1_3860 Lactuca sativa HOM05D002925 ORTHO05D003247 7.9e-08 60.8 62 51.6
Nn1g05384 Nelumbo nucifera HOM05D002925 ORTHO05D003247 7.9e-08 60.8 58 55.2
FAN04G0469 Fragaria x ananassa HOM05D002925 ORTHO05D003247 1.0e-07 60.5 65 53.8
FAN13G2209 Fragaria x ananassa HOM05D002925 ORTHO05D003247 1.0e-07 60.5 65 53.8
TAR076G0002 Trochodendron aralioides HOM05D002925 ORTHO05D003247 1.0e-07 60.5 78 44.9
FvH4_5g37120 Fragaria vesca HOM05D002925 ORTHO05D003247 1.4e-07 60.1 64 54.7
FAN18G3145 Fragaria x ananassa HOM05D002925 ORTHO05D003247 1.4e-07 60.1 64 54.7
Gohir.A01G127000 Gossypium hirsutum HOM05D002925 ORTHO05D003247 1.4e-07 60.1 77 44.2
Gohir.D01G114901 Gossypium hirsutum HOM05D002925 ORTHO05D003247 1.4e-07 60.1 77 44.2
Gorai.002G140700 Gossypium raimondii HOM05D002925 ORTHO05D003247 1.4e-07 60.1 77 44.2
CANSAT25G0699 Cannabis sativa HOM05D002925 ORTHO05D003247 1.8e-07 59.7 86 46.5
Cpa.g.sc53.130 Carica papaya HOM05D002925 ORTHO05D003247 1.8e-07 59.7 83 43.4
FAN08G0410 Fragaria x ananassa HOM05D002925 ORTHO05D003247 1.8e-07 59.7 76 51.3
HanXRQChr05g0145421 Helianthus annuus HOM05D002925 ORTHO05D003247 3.0e-07 58.9 83 47.0
QL12p036977 Quercus lobata HOM05D002925 ORTHO05D003247 3.9e-07 58.5 84 44.0
Nn5g30080 Nelumbo nucifera HOM05D002925 ORTHO05D003247 5.1e-07 58.2 58 51.7
Psat5g138880 Pisum sativum HOM05D002925 ORTHO05D003247 5.1e-07 58.2 83 43.4
TAR625G1540 Trochodendron aralioides HOM05D002925 ORTHO05D003247 5.1e-07 58.2 63 49.2
Aqoxy6G00762 Aquilegia oxysepala HOM05D002925 ORTHO05D003247 6.7e-07 57.8 80 47.5
arahy.Tifrunner.gnm1.ann1.66CWE3 Arachis hypogaea HOM05D002925 ORTHO05D003247 6.7e-07 57.8 70 50.0
arahy.Tifrunner.gnm1.ann1.8R41I4 Arachis hypogaea HOM05D002925 ORTHO05D003247 6.7e-07 57.8 70 50.0
CDE10G0644 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 6.7e-07 57.8 88 38.6
MBI02_g35745_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 6.7e-07 57.8 55 50.9
PSO447G0391 Papaver somniferum HOM05D002925 ORTHO05D003247 6.7e-07 57.8 89 42.7
PSO531G0001 Papaver somniferum HOM05D002925 ORTHO05D003247 6.7e-07 57.8 89 42.7
Rhsim06G0081200 Rhododendron simsii HOM05D002925 ORTHO05D003247 6.7e-07 57.8 75 44.0
Prupe.1G518500 Prunus persica HOM05D002925 ORTHO05D003247 1.1e-06 57.0 70 50.0
CDE10G0684 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 2.0e-06 56.2 65 43.1
ClCG08G011160 Citrullus lanatus HOM05D002925 ORTHO05D003247 2.6e-06 55.8 92 43.5
Sed0026617 Sechium edule HOM05D002925 ORTHO05D003247 5.7e-06 54.7 84 42.9
Ca_15252_v3 Cicer arietinum L. HOM05D002925 ORTHO05D003247 7.4e-06 54.3 96 39.6
COL.COLO4_16382 Corchorus olitorius HOM05D002925 ORTHO05D003247 7.4e-06 54.3 54 55.6
MD08G1184300 Malus domestica HOM05D002925 ORTHO05D003247 7.4e-06 54.3 72 45.8
VMungo1309G2842 Vigna mungo HOM05D002925 ORTHO05D003247 7.4e-06 54.3 54 57.4
Duzib093G1387 Durio zibethinus HOM05D002925 ORTHO05D003247 9.7e-06 53.9 54 55.6
Thecc.02G136300 Theobroma cacao HOM05D002925 ORTHO05D003247 9.7e-06 53.9 59 50.8
TPR.G26131 Trifolium pratense HOM05D002925 ORTHO05D003247 9.7e-06 53.9 65 46.2
vmacro21264 Vaccinium macrocarpon HOM05D002925 ORTHO05D003247 9.7e-06 53.9 77 44.2


User provided reference genes

Program Settings