Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g072320.3 Solanum lycopersicum HOM05D005268 ORTHO05D000493 2.0e-62 242.3 121 100.0
Sopen04g028510 Solanum pennellii HOM05D005268 ORTHO05D000493 2.4e-60 235.3 121 97.5
Sopen04g028530 Solanum pennellii HOM05D000002 ORTHO05D000047 1.3e-58 229.6 118 97.5
Solyc04g072340.1 Solanum lycopersicum HOM05D005268 ORTHO05D000493 6.5e-42 174.1 107 84.1
Solyc04g072360.2 Solanum lycopersicum HOM05D005268 ORTHO05D000493 2.8e-40 168.7 121 69.4
Nitab4.5_0002580g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.8e-31 139.4 106 66.0
Nitab4.5_0004040g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 4.1e-28 128.3 117 59.0
Peaxi162Scf00756g00433 Petunia axillaris HOM05D005268 ORTHO05D000493 1.6e-27 126.3 114 62.3
Nitab4.5_0012602g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 3.9e-26 121.7 118 58.5
Nitab4.5_0001915g0090 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.1e-24 115.9 116 60.3
Nitab4.5_0001915g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.2e-23 111.3 115 53.0
Peaxi162Scf00168g00921 Petunia axillaris HOM05D005268 ORTHO05D000493 8.9e-23 110.5 118 54.2
Peaxi162Scf00168g01740 Petunia axillaris HOM05D005268 ORTHO05D000493 5.8e-22 107.8 116 53.4
Nitab4.5_0001915g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 7.5e-22 107.5 113 54.0
Peaxi162Scf00136g02210 Petunia axillaris HOM05D005268 ORTHO05D000493 7.5e-22 107.5 118 53.4
Nitab4.5_0007952g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 9.8e-22 107.1 114 52.6
Nitab4.5_0002580g0050 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.7e-21 106.3 112 51.8
Peaxi162Scf00066g00161 Petunia axillaris HOM05D005268 ORTHO05D000493 2.2e-21 105.9 125 52.0
Nitab4.5_0001915g0070 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.9e-20 102.8 90 62.2
Peaxi162Scf00066g01220 Petunia axillaris HOM05D005268 ORTHO05D000493 7.0e-20 100.9 110 58.2
Peaxi162Scf00066g01521 Petunia axillaris HOM05D005268 ORTHO05D000493 2.7e-19 99.0 84 59.5
Peaxi162Scf00168g00113 Petunia axillaris HOM05D005268 ORTHO05D000493 2.7e-19 99.0 101 55.4
Peaxi162Scf00066g01416 Petunia axillaris HOM05D005268 ORTHO05D000493 4.6e-19 98.2 103 53.4
Peaxi162Scf00168g00719 Petunia axillaris HOM05D005268 ORTHO05D000493 1.3e-18 96.7 116 54.3
Peaxi162Scf00168g01738 Petunia axillaris HOM05D005268 ORTHO05D000493 3.0e-18 95.5 111 50.5
Peaxi162Scf00066g01412 Petunia axillaris HOM05D005268 ORTHO05D000493 5.0e-18 94.7 118 50.8
Nitab4.5_0001915g0060 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.1e-17 93.6 117 51.3
Peaxi162Scf00051g00515 Petunia axillaris HOM05D005268 ORTHO05D000493 1.1e-17 93.6 107 51.4
PGSC0003DMG400023005 Solanum tuberosum HOM05D005268 ORTHO05D000493 1.1e-17 93.6 118 45.8
PGSC0003DMG400023008 Solanum tuberosum HOM05D005268 ORTHO05D000493 1.1e-17 93.6 118 45.8
Nitab4.5_0003030g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.5e-17 93.2 90 52.2
Sopen01g027240 Solanum pennellii HOM05D005268 ORTHO05D000493 1.5e-17 93.2 118 48.3
PGSC0003DMG400021962 Solanum tuberosum HOM05D005268 ORTHO05D000493 1.5e-17 93.2 115 50.4
Nitab4.5_0000830g0090 Nicotiana tabacum HOM05D005268 ORTHO05D000493 3.3e-17 92.0 104 51.0
PGSC0003DMG400027796 Solanum tuberosum HOM05D000147 ORTHO05D004360 5.6e-17 91.3 96 53.1
Peaxi162Scf00066g01320 Petunia axillaris HOM05D005268 ORTHO05D000493 7.3e-17 90.9 100 51.0
Peaxi162Scf00168g01739 Petunia axillaris HOM05D005268 ORTHO05D000493 1.2e-16 90.1 114 50.9
Nitab4.5_0001915g0110 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.1e-16 89.4 111 55.0
Solyc01g065740.3 Solanum lycopersicum HOM05D005268 ORTHO05D000493 3.6e-16 88.6 117 47.0
PGSC0003DMG400023006 Solanum tuberosum HOM05D005268 ORTHO05D000493 1.1e-15 87.0 114 48.2
Nitab4.5_0003375g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.8e-15 86.3 106 53.8
Peaxi162Scf00338g00523 Petunia axillaris HOM05D005268 ORTHO05D011324 4.0e-15 85.1 114 43.9
Nitab4.5_0011431g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 6.8e-15 84.3 127 40.9
Solyc01g065840.4 Solanum lycopersicum HOM05D005268 ORTHO05D000493 6.8e-15 84.3 115 46.1
Nitab4.5_0005678g0050 Nicotiana tabacum HOM05D005268 ORTHO05D000493 8.9e-15 84.0 99 46.5
Peaxi162Scf00360g00618 Petunia axillaris HOM05D005268 ORTHO05D000493 3.4e-14 82.0 113 45.1
Nitab4.5_0001915g0050 Nicotiana tabacum HOM05D005268 ORTHO05D000493 4.4e-14 81.6 79 54.4
Peaxi162Scf00066g01218 Petunia axillaris HOM05D005268 ORTHO05D000493 4.4e-14 81.6 113 46.0
Nitab4.5_0004040g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.8e-14 81.3 77 55.8
Peaxi162Scf01070g00031 Petunia axillaris HOM05D005268 ORTHO05D000493 5.8e-14 81.3 112 42.9
Nitab4.5_0004040g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 9.8e-14 80.5 79 55.7
Nitab4.5_0010157g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 9.8e-14 80.5 109 44.0
Nitab4.5_0014138g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.2e-13 79.3 120 43.3
Nitab4.5_0005678g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.9e-13 79.0 113 43.4
Peaxi162Scf00168g00922 Petunia axillaris HOM05D005268 ORTHO05D000493 2.9e-13 79.0 80 52.5
Nitab4.5_0002444g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 4.9e-13 78.2 127 38.6
Nitab4.5_0002719g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 4.9e-13 78.2 126 38.9
Peaxi162Scf00338g00629 Petunia axillaris HOM05D005268 ORTHO05D000493 1.1e-12 77.0 114 43.9
Peaxi162Scf00756g00431 Petunia axillaris HOM05D005268 ORTHO05D000493 1.1e-12 77.0 120 42.5
Peaxi162Scf00168g01126 Petunia axillaris HOM05D005268 ORTHO05D000493 2.4e-12 75.9 118 40.7
Nitab4.5_0000203g0190 Nicotiana tabacum HOM05D005268 ORTHO05D000493 4.1e-12 75.1 120 40.8
Nitab4.5_0003375g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.4e-12 74.7 121 41.3
CAN.G726.16 Capsicum annuum HOM05D005268 ORTHO05D000493 1.6e-11 73.2 95 45.3
Nitab4.5_0001483g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.6e-11 73.2 104 45.2
Peaxi162Scf01070g00124 Petunia axillaris HOM05D005268 ORTHO05D000493 2.1e-11 72.8 112 39.3
Peaxi162Scf00168g01712 Petunia axillaris HOM05D005268 ORTHO05D000493 7.8e-11 70.9 85 47.1
Peaxi162Scf01070g00030 Petunia axillaris HOM05D001396 ORTHO05D000493 7.8e-11 70.9 92 46.7
Solyc04g072600.3 Solanum lycopersicum HOM05D005268 ORTHO05D000493 7.8e-11 70.9 77 45.5
Solyc04g057950.2 Solanum lycopersicum HOM05D001396 ORTHO05D000493 1.3e-10 70.1 113 38.9
Nitab4.5_0001915g0080 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.7e-10 69.7 69 56.5
Sopen04g025810 Solanum pennellii HOM05D001396 ORTHO05D000493 1.7e-10 69.7 113 38.9
Nitab4.5_0002580g0060 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.3e-10 69.3 62 59.7
CAN.G726.13 Capsicum annuum HOM05D005268 ORTHO05D000493 3.9e-10 68.6 88 45.5
Nitab4.5_0000203g0170 Nicotiana tabacum HOM05D005268 ORTHO05D000493 6.6e-10 67.8 116 38.8
CAN.G1026.2 Capsicum annuum HOM05D005268 ORTHO05D000493 1.1e-09 67.0 92 40.2
Nitab4.5_0005834g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.5e-09 66.6 96 42.7
Nitab4.5_0001111g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.9e-09 66.2 97 42.3
PGSC0003DMG400023030 Solanum tuberosum HOM05D005268 ORTHO05D000493 9.5e-09 63.9 113 37.2
Nitab4.5_0008458g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.2e-08 63.5 75 49.3
Nitab4.5_0002580g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.0e-06 56.2 115 36.5
Nitab4.5_0010157g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 3.4e-06 55.5 61 55.7
Solyc01g056960.1 Solanum lycopersicum HOM05D005268 ORTHO05D007166 3.4e-06 55.5 82 31.7
Peaxi162Scf00338g00627 Petunia axillaris HOM05D001396 ORTHO05D000493 4.4e-06 55.1 99 36.4
PGSC0003DMG401014790 Solanum tuberosum HOM05D005268 ORTHO05D000493 5.8e-06 54.7 105 39.0


User provided reference genes

Program Settings