Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 2.0e-211 738.8 365 100.0
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 3.1e-204 714.9 365 97.3
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 1.6e-155 553.1 368 78.3
PGSC0003DMG400025053 Solanum tuberosum HOM05D007372 ORTHO05D009318 1.5e-153 546.6 305 89.2
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 4.0e-119 432.2 366 62.6
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.6e-88 330.5 365 51.2
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 7.4e-81 305.1 349 52.4
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 7.7e-46 188.7 205 54.1
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 2.6e-41 173.7 167 56.9
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 1.7e-40 171.0 318 37.7
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 2.2e-40 170.6 137 61.3
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 2.9e-40 170.2 204 50.0
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 1.1e-39 168.3 262 44.3
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 1.8e-39 167.5 319 37.9
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 4.1e-39 166.4 319 37.6
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 5.4e-39 166.0 322 38.2
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 1.6e-38 164.5 207 49.8
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 4.6e-38 162.9 319 37.9
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 2.3e-37 160.6 317 37.2
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 3.0e-37 160.2 190 48.9
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 8.6e-37 158.7 209 48.8
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 1.9e-36 157.5 366 33.6
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 1.9e-36 157.5 209 45.0
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 1.9e-36 157.5 275 39.3
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 2.5e-36 157.1 203 47.3
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 2.5e-36 157.1 257 40.1
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 2.5e-36 157.1 220 44.5
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 1.2e-35 154.8 177 52.5
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 1.6e-35 154.5 253 40.3
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 2.1e-35 154.1 248 38.7
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 2.8e-35 153.7 172 51.2
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 3.6e-35 153.3 203 44.8
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 1.0e-34 151.8 164 50.6
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 2.3e-34 150.6 171 48.5
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 2.3e-34 150.6 190 46.8
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 3.1e-34 150.2 197 50.8
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 4.0e-34 149.8 209 45.5
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 5.2e-34 149.4 176 50.0
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 1.5e-33 147.9 176 50.6
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 2.0e-33 147.5 287 37.6
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 2.0e-33 147.5 188 50.5
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 3.4e-33 146.7 371 34.5
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 5.8e-33 146.0 287 38.3
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 5.8e-33 146.0 362 34.0
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 9.8e-33 145.2 180 47.8
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 4.9e-32 142.9 274 38.7
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 4.1e-31 139.8 119 63.9
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 7.0e-31 139.0 167 49.1
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 1.2e-30 138.3 159 49.1
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 1.6e-30 137.9 282 36.5
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 2.0e-30 137.5 211 43.1
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 2.7e-30 137.1 205 44.4
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 3.5e-30 136.7 259 35.9
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 1.3e-29 134.8 211 43.1
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 1.7e-29 134.4 145 50.3
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 2.3e-29 134.0 366 33.1
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 3.0e-29 133.7 212 43.9
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 3.3e-28 130.2 207 41.5
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 4.3e-28 129.8 162 49.4
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 1.2e-27 128.3 249 37.8
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 1.6e-27 127.9 292 37.0
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 3.6e-27 126.7 279 36.9
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 3.6e-27 126.7 173 44.5
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 4.7e-27 126.3 102 61.8
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 1.8e-26 124.4 247 39.3
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 1.8e-26 124.4 176 44.9
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 2.3e-26 124.0 273 36.3
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 4.0e-26 123.2 182 44.5
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 4.0e-26 123.2 234 40.2
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 1.2e-25 121.7 153 46.4
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 1.7e-24 117.9 159 47.2
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 4.9e-24 116.3 106 59.4
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 6.4e-24 115.9 151 45.0
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 6.4e-24 115.9 259 35.9
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 8.3e-24 115.5 155 45.8
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 1.1e-23 115.2 192 40.6
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 1.4e-23 114.8 153 45.1
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 3.2e-23 113.6 109 56.9
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 9.2e-23 112.1 217 37.8
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 9.2e-23 112.1 263 34.2
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 2.7e-22 110.5 272 36.0
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 4.6e-22 109.8 197 40.6
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 4.6e-22 109.8 231 36.4
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 1.3e-21 108.2 111 55.0
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 1.7e-21 107.8 143 43.4
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 2.3e-21 107.5 297 32.3
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 8.6e-21 105.5 151 43.0
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 1.1e-20 105.1 137 42.3
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 2.5e-20 104.0 140 44.3
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 3.3e-20 103.6 167 40.7
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 7.3e-20 102.4 141 42.6
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 1.2e-17 95.1 120 44.2
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 1.1e-15 88.6 243 32.1
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 2.7e-14 84.0 104 49.0
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 3.5e-14 83.6 160 38.8
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 1.7e-13 81.3 140 37.9
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 2.3e-13 80.9 197 32.0
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 5.6e-12 76.3 90 52.2
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 2.8e-11 73.9 89 50.6
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 1.4e-10 71.6 107 40.2


User provided reference genes

Program Settings