Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 1.7e-76 289.7 196 100.0
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 4.3e-67 258.5 179 99.4
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 2.1e-66 256.1 179 98.9
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 7.5e-64 247.7 179 96.1
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 1.6e-61 240.0 184 90.2
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 1.0e-60 237.3 176 93.8
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 1.3e-60 236.9 179 91.1
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 3.9e-60 235.3 174 93.1
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 1.4e-57 226.9 177 88.1
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 8.9e-57 224.2 176 82.4
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 9.9e-56 220.7 177 84.7
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 1.3e-55 220.3 176 84.7
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 3.8e-55 218.8 178 84.8
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 1.1e-54 217.2 174 87.4
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 5.4e-54 214.9 174 82.8
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 4.6e-53 211.8 174 85.6
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 1.3e-52 210.3 173 86.1
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 1.7e-52 209.9 177 83.1
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 2.3e-52 209.5 183 80.9
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 3.0e-52 209.1 179 82.7
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 5.1e-52 208.4 174 75.3
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 8.7e-52 207.6 177 81.9
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 1.1e-51 207.2 176 77.3
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 1.1e-51 207.2 174 81.0
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 2.5e-51 206.1 176 79.5
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 2.5e-51 206.1 174 82.8
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 3.3e-51 205.7 174 80.5
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 5.6e-51 204.9 174 81.0
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 7.3e-51 204.5 176 77.8
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 7.3e-51 204.5 174 83.3
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 7.3e-51 204.5 174 78.7
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 7.3e-51 204.5 176 80.1
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 7.3e-51 204.5 174 83.3
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 7.3e-51 204.5 174 83.3
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 7.3e-51 204.5 175 60.0
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 1.2e-50 203.8 175 78.9
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 1.2e-50 203.8 174 83.3
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 1.2e-50 203.8 174 80.5
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 1.6e-50 203.4 174 78.2
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 2.1e-50 203.0 174 82.2
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 2.8e-50 202.6 174 81.0
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 4.7e-50 201.8 174 80.5
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 4.7e-50 201.8 176 77.8
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 4.7e-50 201.8 174 80.5
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 4.7e-50 201.8 174 80.5
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 4.7e-50 201.8 179 81.6
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 4.7e-50 201.8 174 81.6
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 4.7e-50 201.8 174 82.2
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 6.2e-50 201.4 174 81.6
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 8.1e-50 201.1 177 81.4
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 1.1e-49 200.7 174 79.3
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 1.8e-49 199.9 174 78.7
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 2.4e-49 199.5 174 77.6
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 4.0e-49 198.7 176 77.3
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 5.3e-49 198.4 176 79.0
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 6.9e-49 198.0 176 56.8
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 1.5e-48 196.8 177 74.0
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 2.6e-48 196.1 179 79.3
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 2.6e-48 196.1 176 80.7
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 3.4e-48 195.7 179 77.1
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 3.4e-48 195.7 174 81.0
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 4.4e-48 195.3 179 78.8
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 5.8e-48 194.9 176 80.1
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 9.9e-48 194.1 176 81.2
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 9.9e-48 194.1 180 76.7
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 2.9e-47 192.6 176 77.8
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 2.9e-47 192.6 174 78.2
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 6.4e-47 191.4 176 79.0
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 1.1e-46 190.7 174 75.9
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 3.2e-46 189.1 181 73.5
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 4.2e-46 188.7 179 78.8
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 7.1e-46 188.0 191 52.4
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 1.6e-45 186.8 174 77.6
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 2.1e-45 186.4 174 79.3
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 3.5e-45 185.7 199 49.2
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 1.0e-44 184.1 176 76.7
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 2.3e-44 183.0 174 76.4
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 1.9e-43 179.9 175 76.0
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 1.9e-43 179.9 247 44.1
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 2.5e-43 179.5 176 54.5
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 3.3e-43 179.1 174 54.6
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 3.3e-43 179.1 175 74.3
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 9.6e-43 177.6 174 75.3
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 2.8e-42 176.0 176 53.4
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 2.8e-42 176.0 176 53.4
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 6.2e-42 174.9 204 62.7
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 1.1e-41 174.1 176 49.4
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 1.4e-41 173.7 155 81.9
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 1.4e-41 173.7 176 56.8
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 6.9e-41 171.4 145 87.6
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 5.8e-40 168.3 179 49.7
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.4e-38 163.7 138 92.0
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 1.4e-38 163.7 174 46.6
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 2.4e-38 162.9 179 72.6
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 2.4e-38 162.9 175 48.0
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 5.4e-38 161.8 85 90.6
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.8e-36 156.8 171 49.1
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 3.9e-36 155.6 192 67.2
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 8.7e-36 154.5 174 46.6
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 8.7e-36 154.5 150 51.3
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 1.1e-35 154.1 173 50.9
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 5.3e-33 145.2 138 77.5
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 2.0e-32 143.3 160 73.1
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 2.6e-32 142.9 86 76.7
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 1.3e-31 140.6 177 63.3
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 1.4e-30 137.1 138 67.4
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 7.1e-30 134.8 87 74.7
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 2.7e-29 132.9 125 74.4
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 3.5e-29 132.5 87 67.8
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 4.6e-29 132.1 87 67.8
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 1.8e-28 130.2 86 67.4
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 2.5e-27 126.3 87 66.7
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 1.8e-25 120.2 86 64.0
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 5.8e-24 115.2 215 36.7
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 3.2e-22 109.4 120 47.5
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 1.6e-21 107.1 119 48.7
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 2.7e-21 106.3 165 39.4
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 1.3e-18 97.4 128 43.0
CBR_g12236 Chara braunii HOM05D006436 ORTHO05D008011 7.2e-14 81.6 115 36.5
CAN.G935.5 Capsicum annuum HOM05D006436 ORTHO05D008011 2.8e-10 69.7 37 89.2
Nitab4.5_0011078g0020 Nicotiana tabacum HOM05D006436 ORTHO05D008011 4.8e-10 68.9 37 86.5
Thecc.05G304200 Theobroma cacao HOM05D006436 ORTHO05D008011 6.3e-10 68.6 98 41.8
CsaV3_1G031100 Cucumis sativus L. HOM05D006436 ORTHO05D008011 4.1e-09 65.9 51 62.7
Nitab4.5_0011078g0030 Nicotiana tabacum HOM05D006436 ORTHO05D008011 6.9e-09 65.1 37 78.4
QL03p022571 Quercus lobata HOM05D006436 ORTHO05D008011 2.2e-07 60.1 36 72.2


User provided reference genes

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