Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 8.7e-145 516.9 255 100.0
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 3.8e-140 501.5 255 97.3
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 4.5e-125 451.4 257 88.3
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 6.1e-114 414.5 256 82.8
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 7.4e-112 407.5 255 80.0
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 2.2e-103 379.4 243 75.3
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 2.8e-103 379.0 250 77.2
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 8.2e-103 377.5 254 73.6
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.4e-102 375.9 240 79.2
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 7.0e-102 374.4 253 74.3
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 1.2e-101 373.6 250 74.8
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 2.0e-101 372.9 257 73.2
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 2.6e-101 372.5 200 88.0
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 5.9e-101 371.3 243 75.7
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 1.0e-100 370.5 250 74.8
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 1.3e-100 370.2 248 75.0
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 2.9e-100 369.0 229 78.6
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 2.9e-100 369.0 246 74.4
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.9e-100 369.0 242 76.9
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 2.9e-100 369.0 248 75.0
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 5.0e-100 368.2 242 76.4
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 5.0e-100 368.2 213 81.7
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 5.0e-100 368.2 235 77.4
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 6.5e-100 367.9 245 75.1
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 8.5e-100 367.5 248 75.0
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 8.5e-100 367.5 240 75.8
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 8.5e-100 367.5 242 76.4
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 1.5e-99 366.7 246 74.4
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 1.5e-99 366.7 240 73.8
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 1.9e-99 366.3 245 73.9
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 2.5e-99 365.9 244 72.5
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 9.4e-99 364.0 253 72.7
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 1.2e-98 363.6 254 73.6
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 1.2e-98 363.6 248 73.4
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 1.2e-98 363.6 214 81.3
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 1.2e-98 363.6 247 72.5
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 2.1e-98 362.8 253 70.4
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 2.1e-98 362.8 245 74.3
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 4.7e-98 361.7 246 73.6
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 6.1e-98 361.3 251 72.9
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 8.0e-98 360.9 197 85.8
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 2.3e-97 359.4 256 71.5
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 2.3e-97 359.4 245 72.2
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 3.0e-97 359.0 239 75.7
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 5.2e-97 358.2 286 66.8
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 1.5e-96 356.7 206 82.0
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 3.3e-96 355.5 251 70.9
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 4.4e-96 355.1 241 73.4
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 4.4e-96 355.1 246 72.4
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 5.7e-96 354.8 252 71.8
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 7.4e-96 354.4 227 77.1
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 2.2e-95 352.8 252 70.2
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 2.8e-95 352.4 232 75.4
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 4.8e-95 351.7 199 83.9
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 8.2e-95 350.9 255 71.4
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 1.4e-94 350.1 243 74.1
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 1.4e-94 350.1 233 74.7
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 1.8e-94 349.7 226 75.7
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 3.1e-94 349.0 203 78.8
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 4.1e-94 348.6 220 76.4
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 7.0e-94 347.8 233 72.1
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 7.0e-94 347.8 231 73.6
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 7.0e-94 347.8 234 72.6
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 1.2e-93 347.1 220 76.4
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 1.2e-93 347.1 231 74.9
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 1.6e-93 346.7 253 70.8
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 1.7e-92 343.2 203 81.3
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 2.2e-92 342.8 223 74.9
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 6.5e-92 341.3 209 76.1
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 1.5e-91 340.1 195 81.5
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 7.2e-91 337.8 195 81.0
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.6e-90 336.7 202 77.2
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 4.7e-90 335.1 217 77.4
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 2.3e-89 332.8 253 68.0
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 4.0e-89 332.0 255 67.1
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 7.5e-88 327.8 193 77.7
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 1.1e-86 323.9 242 69.8
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 2.7e-85 319.3 233 70.0
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 4.5e-85 318.5 207 76.8
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 4.2e-83 312.0 212 73.1
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 7.2e-83 311.2 242 67.8
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 2.3e-81 306.2 245 66.5
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 8.8e-81 304.3 198 74.2
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.0e-80 303.1 185 75.1
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 3.4e-80 302.4 193 72.0
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 5.7e-80 301.6 192 72.9
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 7.5e-80 301.2 204 73.5
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 9.1e-78 294.3 199 72.9
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 7.2e-75 284.6 183 71.0
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.1e-74 283.1 176 71.0
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 4.7e-74 282.0 204 72.1
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 9.8e-72 274.2 242 61.2
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 9.2e-70 267.7 262 58.8
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 2.9e-68 262.7 202 66.3
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 3.3e-67 259.2 141 87.9
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 7.5e-64 248.1 147 78.9
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.5e-59 233.8 137 83.2
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 7.3e-59 231.5 247 54.7
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 8.1e-58 228.0 247 55.1
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.2e-53 214.2 172 59.3
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 1.0e-52 211.1 198 57.1
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 1.7e-52 210.3 198 52.5
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 3.4e-48 196.1 200 54.5
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 3.9e-44 182.6 161 60.2
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 6.2e-42 175.3 103 77.7
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.4e-41 173.3 149 53.7
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 4.4e-40 169.1 105 76.2
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 5.6e-27 125.6 71 87.3
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 5.8e-24 115.5 214 38.8
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 2.2e-23 113.6 77 70.1
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 2.5e-14 83.6 85 55.3


User provided reference genes

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