Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g063400.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 4.8e-93 344.4 158 100.0
Sopen04g026320 Solanum pennellii HOM05D000007 ORTHO05D000039 3.8e-90 334.7 158 97.5
PGSC0003DMG400024836 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.4e-76 289.7 153 84.3
PGSC0003DMG400024834 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.3e-74 283.1 151 83.4
CAN.G46.3 Capsicum annuum HOM05D000007 ORTHO05D000039 4.6e-72 274.6 156 76.9
Sopen04g026360 Solanum pennellii HOM05D000007 ORTHO05D000039 1.5e-70 269.6 151 80.1
Sopen04g026380 Solanum pennellii HOM05D000007 ORTHO05D000039 3.7e-69 265.0 147 81.6
Solyc04g063440.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.8e-68 262.7 151 79.5
Sopen04g026370 Solanum pennellii HOM05D000007 ORTHO05D000039 1.2e-67 260.0 151 76.8
Sopen00g010140 Solanum pennellii HOM05D000007 ORTHO05D000039 3.4e-67 258.5 151 78.1
Solyc04g063415.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.7e-66 256.1 151 76.8
Solyc04g064440.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.7e-66 256.1 151 76.8
PGSC0003DMG400024833 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.4e-65 253.1 141 80.9
Solyc04g064450.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 5.5e-65 251.1 151 75.5
Nitab4.5_0000174g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.5e-59 231.5 158 67.7
PGSC0003DMG400024835 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.2e-58 229.2 114 89.5
Nitab4.5_0008120g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.5e-58 227.6 158 66.5
PGSC0003DMG400024829 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.2e-57 225.3 142 71.8
PGSC0003DMG400024825 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.0e-55 218.4 138 69.6
Sopen04g026420 Solanum pennellii HOM05D000007 ORTHO05D000039 1.6e-48 196.4 133 67.7
PGSC0003DMG400037627 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.4e-39 166.8 137 61.3
Peaxi162Scf00066g01632 Petunia axillaris HOM05D000007 ORTHO05D000039 2.6e-38 162.5 146 54.8
Sopen04g026410 Solanum pennellii HOM05D000007 ORTHO05D000039 1.7e-37 159.8 144 56.9
Sopen04g026400 Solanum pennellii HOM05D000007 ORTHO05D000039 2.2e-37 159.5 130 63.1
PGSC0003DMG400039355 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.2e-37 159.5 137 60.6
Solyc04g064460.2 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.3e-34 149.4 108 63.0
Peaxi162Scf00033g00214 Petunia axillaris HOM05D000007 ORTHO05D000039 1.1e-33 147.1 156 46.2
CAN.G46.1 Capsicum annuum HOM05D000007 ORTHO05D000039 9.5e-33 144.1 84 75.0
Nitab4.5_0006722g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.2e-32 143.7 146 45.9
Peaxi162Scf01439g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 1.2e-32 143.7 146 45.9
PGSC0003DMG400038531 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.2e-32 143.7 110 64.5
Nitab4.5_0000174g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.8e-31 137.9 126 54.0
Nitab4.5_0001821g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.8e-31 137.9 145 45.5
Nitab4.5_0010416g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.0e-30 136.3 145 44.8
PGSC0003DMG400045617 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.4e-30 135.6 132 45.5
Nitab4.5_0013238g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.7e-30 134.8 137 46.7
Solyc06g059810.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 9.8e-30 134.0 128 44.5
Nitab4.5_0001530g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.2e-29 132.9 135 45.9
PGSC0003DMG400013031 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.9e-29 131.7 144 43.8
Peaxi162Scf00033g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 1.8e-28 129.8 146 41.1
PGSC0003DMG400030753 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.8e-28 129.8 147 40.8
Sopen06g019900 Solanum pennellii HOM05D000007 ORTHO05D000039 2.0e-27 126.3 144 42.4
Peaxi162Scf00033g00031 Petunia axillaris HOM05D000007 ORTHO05D000039 5.0e-26 121.7 138 39.9
Peaxi162Scf00037g00084 Petunia axillaris HOM05D000007 ORTHO05D000039 5.6e-25 118.2 138 39.1
Sopen06g019890 Solanum pennellii HOM05D000007 ORTHO05D000039 7.3e-25 117.9 147 38.8
Solyc06g059820.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.2e-24 117.1 147 38.8
CAN.G319.8 Capsicum annuum HOM05D000007 ORTHO05D000039 1.0e-23 114.0 141 40.4
PGSC0003DMG400030752 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.0e-22 109.8 148 37.2
SalBow1G6928 Salvia bowleyana HOM05D000007 ORTHO05D000039 1.3e-21 107.1 147 38.8
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 6.4e-21 104.8 147 35.4
MSTRG.3214 Avicennia marina HOM05D000007 ORTHO05D000039 1.1e-20 104.0 147 39.5
PGSC0003DMG400024831 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.2e-20 102.4 82 63.4
Peaxi162Scf00033g00025 Petunia axillaris HOM05D000007 ORTHO05D000039 4.3e-17 92.0 88 44.3
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 4.7e-16 88.6 137 36.5
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 6.2e-16 88.2 138 36.2
Nitab4.5_0006627g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.2e-16 88.2 148 36.5
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 8.1e-16 87.8 140 37.9
Lj5C836T5 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-15 87.0 160 35.6
Nitab4.5_0020718g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.8e-15 86.7 66 56.1
Rhsim12G0135700 Rhododendron simsii HOM05D000298 ORTHO05D000039 5.2e-15 85.1 136 34.6
Lj7P401T34 Lonicera japonica HOM05D000007 ORTHO05D000039 6.8e-15 84.7 154 31.8
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 1.2e-14 84.0 138 35.5
Lj3C660T6 Lonicera japonica HOM05D000007 ORTHO05D000039 1.2e-14 84.0 169 32.5
Lj5C836T3 Lonicera japonica HOM05D000007 ORTHO05D000039 2.6e-14 82.8 168 31.5
Lj2C989T3 Lonicera japonica HOM05D000007 ORTHO05D000039 4.1e-12 75.5 173 31.2
Nitab4.5_0000195g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.2e-11 73.9 131 35.1
Cfa000455 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.1e-11 73.2 142 31.0
Lj6C102T0 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-11 73.2 143 31.5
Lj5A746T19 Lonicera japonica HOM05D000007 ORTHO05D000039 2.7e-11 72.8 115 33.9
CAN.G475.39 Capsicum annuum HOM05D000007 ORTHO05D000039 4.6e-11 72.0 133 35.3
Ciclev10026927m.g Citrus clementina HOM05D000007 ORTHO05D000039 4.6e-11 72.0 132 31.1
Lj5C813T2 Lonicera japonica HOM05D000007 ORTHO05D000039 4.6e-11 72.0 160 31.9
Lj5C842T1 Lonicera japonica HOM05D000007 ORTHO05D000039 4.6e-11 72.0 167 30.5
Lj2A996T28 Lonicera japonica HOM05D000007 ORTHO05D000039 6.0e-11 71.6 87 40.2
Cfa000498 Carpinus fangiana HOM05D000007 ORTHO05D000039 7.8e-11 71.2 97 35.1
Lj2P997T15 Lonicera japonica HOM05D000007 ORTHO05D000039 7.8e-11 71.2 134 29.1
Potri.005G114900 Populus trichocarpa HOM05D000007 ORTHO05D000039 7.8e-11 71.2 124 33.1
Peaxi162Scf00700g00039 Petunia axillaris HOM05D000007 ORTHO05D000039 1.0e-10 70.9 136 33.8
Ciclev10027421m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.3e-10 70.5 150 32.7
PGSC0003DMG400003729 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.3e-10 70.5 139 30.9
Cfa000444 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.3e-10 69.7 103 33.0
Cfa006665 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.0e-10 69.3 123 30.1
Lj2C989T8 Lonicera japonica HOM05D000007 ORTHO05D000039 3.0e-10 69.3 174 30.5
Ciclev10027079m.g Citrus clementina HOM05D000007 ORTHO05D000039 6.6e-10 68.2 130 36.2
Cfa000501 Carpinus fangiana HOM05D000007 ORTHO05D000039 8.6e-10 67.8 98 37.8
Peaxi162Scf00074g00039 Petunia axillaris HOM05D000007 ORTHO05D000039 8.6e-10 67.8 144 35.4
Peaxi162Scf00658g00067 Petunia axillaris HOM05D000007 ORTHO05D000039 1.1e-09 67.4 130 33.1
PGSC0003DMG400046209 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.1e-09 67.4 135 37.0
Cfa000440 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.5e-09 67.0 93 34.4
Cfa000500 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.5e-09 67.0 98 36.7
Potri.006G170300 Populus trichocarpa HOM05D000007 ORTHO05D000039 1.5e-09 67.0 130 30.0
PGSC0003DMG400019996 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.5e-09 67.0 140 31.4
Cfa000449 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.9e-09 66.6 93 35.5
Cfa000495 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.5e-09 66.2 98 38.8
Cfa000499 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.5e-09 66.2 98 37.8
Cfa017236 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.5e-09 66.2 130 29.2
Dinv07011 Davidia involucrata HOM05D000007 ORTHO05D000039 3.3e-09 65.9 133 31.6
Peaxi162Scf00803g00535 Petunia axillaris HOM05D000007 ORTHO05D000039 3.3e-09 65.9 131 34.4
Nitab4.5_0018243g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.3e-09 64.7 130 32.3
Peaxi162Scf01571g00011 Petunia axillaris HOM05D000007 ORTHO05D000039 7.3e-09 64.7 131 33.6
Cfa000452 Carpinus fangiana HOM05D000007 ORTHO05D000039 9.5e-09 64.3 93 33.3
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.2e-08 63.9 99 36.4
PGSC0003DMG400005153 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.2e-08 63.9 143 35.0
Peaxi162Scf00803g00055 Petunia axillaris HOM05D000007 ORTHO05D000039 1.6e-08 63.5 129 32.6
PGSC0003DMG400017392 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.6e-08 63.5 141 34.8
Peaxi162Scf00362g01132 Petunia axillaris HOM05D000007 ORTHO05D000039 2.1e-08 63.2 134 34.3
Peaxi162Scf01075g00018 Petunia axillaris HOM05D000007 ORTHO05D000039 2.1e-08 63.2 130 33.8
Nitab4.5_0008218g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.8e-08 62.8 136 34.6
Peaxi162Scf00658g00066 Petunia axillaris HOM05D000007 ORTHO05D000039 2.8e-08 62.8 137 35.0
QL05p044233 Quercus lobata HOM05D000007 ORTHO05D000039 2.8e-08 62.8 120 35.0
Cfa000443 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.6e-08 62.4 93 34.4
PGSC0003DMG400010976 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.6e-08 62.4 141 32.6
PGSC0003DMG400017422 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.6e-08 62.4 122 32.8
Nitab4.5_0005483g0060 Nicotiana tabacum HOM05D016135 ORTHO05D016171 6.2e-08 61.6 132 30.3
Peaxi162Scf00700g00311 Petunia axillaris HOM05D000007 ORTHO05D000039 8.1e-08 61.2 137 33.6
Dinv07009 Davidia involucrata HOM05D000007 ORTHO05D000039 1.1e-07 60.8 109 30.3
Cfa000454 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.4e-07 60.5 97 30.9
Potri.017G012200 Populus trichocarpa HOM05D000007 ORTHO05D000039 1.8e-07 60.1 132 31.1
SGA_v2.0_scaffold135G34779 Striga asiatica HOM05D000007 ORTHO05D000039 1.8e-07 60.1 136 30.9
QL05p044215 Quercus lobata HOM05D000007 ORTHO05D000039 2.3e-07 59.7 80 38.8
Cfa000453 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.1e-07 59.3 92 30.4
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 3.1e-07 59.3 144 25.7
Duzib114G0469 Durio zibethinus HOM05D000007 ORTHO05D000039 4.0e-07 58.9 89 36.0
TWI74G1656 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.0e-07 58.9 108 27.8
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 5.2e-07 58.5 105 29.5
Cfa000428 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.2e-06 57.4 90 35.6
Duzib114G0761 Durio zibethinus HOM05D000007 ORTHO05D000039 1.2e-06 57.4 86 34.9
Lj1C663T4 Lonicera japonica HOM05D000007 ORTHO05D000039 1.2e-06 57.4 155 29.7
QL04p029261 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-06 57.4 80 37.5
Lj1C724G4 Lonicera japonica HOM05D000007 ORTHO05D000039 2.0e-06 56.6 89 33.7
Haze_20133 Corylus avellana HOM05D002457 ORTHO05D008732 4.4e-06 55.5 110 24.5
DCAR_019197 Daucus carota HOM05D000007 ORTHO05D000039 7.6e-06 54.7 132 31.1
Peaxi162Scf00700g00033 Petunia axillaris HOM05D000007 ORTHO05D000039 9.9e-06 54.3 129 31.0


User provided reference genes

Program Settings