Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g058200.3 Solanum lycopersicum HOM05D006959 ORTHO05D008808 1.5e-56 222.6 114 100.0
PGSC0003DMG402018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 1.5e-56 222.6 114 100.0
PGSC0003DMG403018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 1.5e-56 222.6 114 100.0
Sopen04g026100 Solanum pennellii HOM05D006959 ORTHO05D008808 9.8e-56 219.9 114 98.2
CAN.G46.11 Capsicum annuum HOM05D006959 ORTHO05D008808 3.2e-54 214.9 114 96.5
Nitab4.5_0002625g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 6.6e-52 207.2 112 92.9
Peaxi162Scf00066g00072 Petunia axillaris HOM05D006959 ORTHO05D008808 2.5e-51 205.3 112 91.1
Nitab4.5_0008327g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 2.6e-48 195.3 136 77.2
TAR381G0659 Trochodendron aralioides HOM05D006959 ORTHO05D008808 1.2e-40 169.9 114 71.9
Cc10_g14010 Coffea canephora HOM05D006959 ORTHO05D008808 1.5e-40 169.5 106 77.4
Atru.chr13.1599 Acer truncatum HOM05D006959 ORTHO05D008808 2.0e-40 169.1 111 73.9
Hma1.2p1_0159F.1_g070330 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 2.0e-40 169.1 113 72.6
Nn1g08935 Nelumbo nucifera HOM05D006959 ORTHO05D008808 2.0e-40 169.1 114 73.7
Lsat_1_v5_gn_1_10340 Lactuca sativa HOM05D006959 ORTHO05D008808 2.6e-40 168.7 110 72.7
Thecc.08G134700 Theobroma cacao HOM05D006959 ORTHO05D008808 3.4e-40 168.3 114 71.1
Oeu026374.1 Olea europaea HOM05D006959 ORTHO05D008808 4.4e-40 167.9 109 73.4
Ciclev10002542m.g Citrus clementina HOM05D006959 ORTHO05D008808 5.8e-40 167.5 110 74.5
TWI32G1355 Tripterygium wilfordii HOM05D006959 ORTHO05D008808 9.8e-40 166.8 114 71.9
CiPaw.16G022000 Carya illinoinensis HOM05D006959 ORTHO05D008808 1.3e-39 166.4 114 71.1
Migut.C01073 Erythranthe guttata HOM05D006959 ORTHO05D008808 2.2e-39 165.6 109 71.6
HanXRQChr02g0045531 Helianthus annuus HOM05D006959 ORTHO05D008808 2.2e-39 165.6 111 71.2
Sed0020251 Sechium edule HOM05D006959 ORTHO05D008808 2.9e-39 165.2 109 71.6
Cfa018414 Carpinus fangiana HOM05D006959 ORTHO05D008808 3.7e-39 164.9 113 69.9
Lj4A666T17 Lonicera japonica HOM05D006959 ORTHO05D008808 3.7e-39 164.9 109 73.4
Potri.002G076700 Populus trichocarpa HOM05D006959 ORTHO05D008808 6.4e-39 164.1 114 70.2
QL09p031413 Quercus lobata HOM05D006959 ORTHO05D008808 8.3e-39 163.7 114 70.2
GSVIVG01008793001 Vitis vinifera HOM05D006959 ORTHO05D008808 8.3e-39 163.7 110 70.9
QL09p031824 Quercus lobata HOM05D006959 ORTHO05D008808 1.1e-38 163.3 114 70.2
RcHm_v2.0_Chr6g0297021 Rosa chinensis HOM05D006959 ORTHO05D008808 1.9e-38 162.5 114 67.5
Aqoxy6G00289 Aquilegia oxysepala HOM05D006959 ORTHO05D008808 2.4e-38 162.2 112 68.8
Duzib093G2176 Durio zibethinus HOM05D006959 ORTHO05D008808 2.4e-38 162.2 115 71.3
Gohir.A05G238900 Gossypium hirsutum HOM05D006959 ORTHO05D008808 2.4e-38 162.2 114 70.2
Phvul.001G066600 Phaseolus vulgaris HOM05D006959 ORTHO05D008808 3.2e-38 161.8 111 70.3
FvH4_2g28060 Fragaria vesca HOM05D006959 ORTHO05D008808 4.1e-38 161.4 114 67.5
Lj4A663T33 Lonicera japonica HOM05D006959 ORTHO05D008808 4.1e-38 161.4 104 75.0
Manes.18G084200 Manihot esculenta HOM05D006959 ORTHO05D008808 4.1e-38 161.4 114 68.4
MSTRG.1406 Avicennia marina HOM05D006959 ORTHO05D008808 9.2e-38 160.2 109 68.8
FAN24G0315 Fragaria x ananassa HOM05D006959 ORTHO05D008808 9.2e-38 160.2 114 67.5
VMungo0647G0259 Vigna mungo HOM05D006959 ORTHO05D008808 9.2e-38 160.2 111 69.4
FAN27G3284 Fragaria x ananassa HOM05D006959 ORTHO05D008808 1.6e-37 159.5 114 66.7
CsaV3_6G033990 Cucumis sativus L. HOM05D006959 ORTHO05D008808 2.1e-37 159.1 109 68.8
Gohir.D05G240800 Gossypium hirsutum HOM05D006959 ORTHO05D008808 2.1e-37 159.1 114 69.3
Gorai.009G249600 Gossypium raimondii HOM05D006959 ORTHO05D008808 2.1e-37 159.1 114 69.3
Cpa.g.sc64.158 Carica papaya HOM05D006959 ORTHO05D008808 2.7e-37 158.7 112 71.4
MBI03_g13506_MAGBIO Magnolia biondii HOM05D006959 ORTHO05D008808 6.0e-37 157.5 112 69.6
MD15G1131600 Malus domestica HOM05D006959 ORTHO05D008808 6.0e-37 157.5 108 69.4
PSO528G0249 Papaver somniferum HOM05D006959 ORTHO05D008808 6.0e-37 157.5 113 67.3
THA.LOC104813687 Tarenaya hassleriana HOM05D006959 ORTHO05D008808 1.3e-36 156.4 114 66.7
PGR042G0886 Punica granatum HOM05D006959 ORTHO05D008808 2.3e-36 155.6 111 67.6
PSO170G0856 Papaver somniferum HOM05D006959 ORTHO05D008808 3.0e-36 155.2 113 66.4
AUR62007695 Chenopodium quinoa HOM05D006959 ORTHO05D008808 8.6e-36 153.7 112 65.2
Haze_17647 Corylus avellana HOM05D006959 ORTHO05D008808 1.5e-35 152.9 128 61.7
Eucgr.F03861 Eucalyptus grandis HOM05D006959 ORTHO05D008808 1.5e-35 152.9 109 66.1
Glyma.13G035500 Glycine max HOM05D006959 ORTHO05D008808 2.5e-35 152.1 111 65.8
AUR62013448 Chenopodium quinoa HOM05D006959 ORTHO05D008808 7.3e-35 150.6 112 62.5
Hma1.2p1_0159F.1_g070340 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 7.3e-35 150.6 108 68.5
arahy.Tifrunner.gnm1.ann1.84IAJ5 Arachis hypogaea HOM05D006959 ORTHO05D008808 9.5e-35 150.2 113 66.4
SalBow7G4180 Salvia bowleyana HOM05D006959 ORTHO05D008808 1.6e-34 149.4 135 57.8
MELO3C008461.2 Cucumis melo HOM05D006959 ORTHO05D008808 2.1e-34 149.1 121 62.8
Hund17359 Selenicereus undatus HOM05D006959 ORTHO05D008808 2.8e-34 148.7 108 64.8
HPP92_016131 Vanilla planifolia HOM05D006959 ORTHO05D008808 2.8e-34 148.7 107 65.4
Os02g0553500 Oryza sativa ssp. japonica HOM05D006959 ORTHO05D008808 3.6e-34 148.3 111 65.8
ClCG08G006070 Citrullus lanatus HOM05D006959 ORTHO05D008808 8.1e-34 147.1 145 53.8
arahy.Tifrunner.gnm1.ann1.P1MCWD Arachis hypogaea HOM05D006959 ORTHO05D008808 1.1e-33 146.7 113 64.6
Zm00001eb181980 Zea mays HOM05D006959 ORTHO05D008808 1.4e-33 146.4 106 67.0
Thhalv10019109m.g Eutrema salsugineum HOM05D006959 ORTHO05D008808 2.3e-33 145.6 109 65.1
Sp5g32400 Schrenkiella parvula HOM05D006959 ORTHO05D008808 5.2e-33 144.4 108 63.9
CDE06G1932 Ceratophyllum demersum HOM05D006959 ORTHO05D008808 1.5e-32 142.9 101 66.3
AT1G77230 Arabidopsis thaliana HOM05D006959 ORTHO05D008808 3.4e-32 141.7 109 64.2
EL10Ac1g01371 Beta vulgaris HOM05D006959 ORTHO05D008808 5.8e-32 141.0 143 53.8
COL.COLO4_32963 Corchorus olitorius HOM05D006959 ORTHO05D008808 7.6e-32 140.6 112 61.6
AL2G37400 Arabidopsis lyrata HOM05D006959 ORTHO05D008808 9.9e-32 140.2 109 63.3
Actinidia24726 Actinidia chinensis HOM05D006959 ORTHO05D008808 1.3e-31 139.8 80 81.2
C06p31380 Brassica napus HOM05D006959 ORTHO05D008808 1.7e-31 139.4 109 62.4
BcaB02g07099 Brassica carinata HOM05D006959 ORTHO05D008808 2.2e-31 139.0 109 60.6
BcaC08g45484 Brassica carinata HOM05D006959 ORTHO05D008808 2.2e-31 139.0 109 60.6
FAN20G3215 Fragaria x ananassa HOM05D006959 ORTHO05D008808 2.2e-31 139.0 114 62.3
A08p07140 Brassica napus HOM05D006959 ORTHO05D008808 2.9e-31 138.7 108 63.0
BraA08t32726Z Brassica rapa HOM05D006959 ORTHO05D008808 2.9e-31 138.7 108 63.0
BolC6t38274H Brassica oleracea HOM05D006959 ORTHO05D008808 3.8e-31 138.3 109 62.4
Actinidia15201 Actinidia chinensis HOM05D006959 ORTHO05D008808 1.1e-30 136.7 114 60.5
Carub.0002s2410 Capsella rubella HOM05D006959 ORTHO05D008808 1.4e-30 136.3 109 60.6
Dinv27258 Davidia involucrata HOM05D006959 ORTHO05D008808 1.9e-30 136.0 124 58.1
ATR0584G163 Amborella trichopoda HOM05D006959 ORTHO05D008808 7.1e-30 134.0 111 58.6
CARHR070700 Cardamine hirsuta HOM05D006959 ORTHO05D008808 1.6e-29 132.9 109 58.7
Lalb_Chr04g0253591 Lupinus albus HOM05D006959 ORTHO05D008808 3.9e-28 128.3 113 57.5
Lj1g0023549 Lotus japonicus HOM05D006959 ORTHO05D008808 8.6e-28 127.1 113 58.4
Sabra02G0060200 Salix brachista HOM05D006959 ORTHO05D008808 1.9e-27 125.9 186 43.5
Aa31LG4G7230 Aethionema arabicum HOM05D006959 ORTHO05D008808 1.2e-26 123.2 133 50.4
Glyma.14G156700 Glycine max HOM05D006959 ORTHO05D008808 3.6e-26 121.7 173 42.2
CANSAT64G0796 Cannabis sativa HOM05D006959 ORTHO05D008808 1.8e-25 119.4 112 54.5
Ca_12642_v3 Cicer arietinum L. HOM05D006959 ORTHO05D008808 1.8e-25 119.4 114 56.1
TPR.G879 Trifolium pratense HOM05D006959 ORTHO05D008808 1.8e-25 119.4 84 71.4
CSS0019542 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 6.9e-25 117.5 114 53.5
Medtr1g029720 Medicago truncatula HOM05D006959 ORTHO05D008808 2.0e-24 115.9 113 54.9
RcHm_v2.0_Chr6g0296961 Rosa chinensis HOM05D006959 ORTHO05D008808 1.3e-20 103.2 75 66.7
Prupe.1G487500 Prunus persica HOM05D006959 ORTHO05D008808 3.0e-20 102.1 71 71.8
Psat6g040840 Pisum sativum HOM05D006959 ORTHO05D008808 3.4e-16 88.6 51 80.4
DCAR_028201 Daucus carota HOM05D006959 ORTHO05D008808 6.4e-15 84.3 113 42.5
Sc26g0002850 Simmondsia chinensis HOM05D006959 ORTHO05D008808 8.4e-15 84.0 74 54.1
SEGI_05118 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 4.2e-14 81.6 78 47.4
SEGI_04582 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 2.7e-13 79.0 78 46.2
Mapoly0050s0106 Marchantia polymorpha HOM05D006959 ORTHO05D008808 1.3e-12 76.6 48 68.8
CSS0009415 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 1.9e-11 72.8 40 82.5
CSS0036249 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 5.6e-11 71.2 40 77.5
Cre12.g510034 Chlamydomonas reinhardtii HOM05D006959 ORTHO05D008808 5.6e-11 71.2 99 45.5
RcHm_v2.0_Chr6g0296981 Rosa chinensis HOM05D006959 ORTHO05D008808 2.9e-07 58.9 37 70.3
CBR_g52628 Chara braunii HOM05D006959 ORTHO05D008808 9.3e-06 53.9 70 42.9


User provided reference genes

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