Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g057850.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.0e-145 518.5 255 100.0
PGSC0003DMG401016933 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.9e-120 436.0 251 87.6
Sopen04g001560 Solanum pennellii HOM05D000092 ORTHO05D000042 4.7e-90 335.1 251 70.1
Solyc04g005540.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.5e-88 330.1 257 69.3
Sopen04g001580 Solanum pennellii HOM05D000092 ORTHO05D000042 1.6e-85 320.1 251 66.5
CAN.G1161.13 Capsicum annuum HOM05D000092 ORTHO05D000042 2.4e-78 296.2 252 66.3
Solyc04g005550.2 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.3e-76 289.7 251 61.8
CAN.G1161.16 Capsicum annuum HOM05D000092 ORTHO05D000042 1.9e-75 286.6 248 64.5
CAN.G1161.10 Capsicum annuum HOM05D000092 ORTHO05D000042 2.4e-70 269.6 253 59.7
CAN.G641.10 Capsicum annuum HOM05D000092 ORTHO05D000042 4.5e-69 265.4 254 62.2
Peaxi162Scf00003g04724 Petunia axillaris HOM05D000092 ORTHO05D000042 2.3e-68 263.1 257 58.8
PGSC0003DMG401017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.3e-68 263.1 263 58.2
PGSC0003DMG402003025 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.0e-68 261.9 211 68.7
PGSC0003DMG402017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.6e-66 256.9 258 58.1
CAN.G1161.51 Capsicum annuum HOM05D000092 ORTHO05D000042 4.0e-65 252.3 254 60.6
CAN.G1161.58 Capsicum annuum HOM05D000092 ORTHO05D000042 6.4e-63 245.0 254 58.7
Sopen02g011670 Solanum pennellii HOM05D000092 ORTHO05D000042 8.3e-63 244.6 252 55.2
PGSC0003DMG400021477 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.6e-61 240.4 230 58.7
PGSC0003DMG400021948 Solanum tuberosum HOM05D000092 ORTHO05D000042 8.6e-60 234.6 246 57.3
CAN.G960.2 Capsicum annuum HOM05D000092 ORTHO05D000042 7.3e-59 231.5 251 57.0
Peaxi162Scf00003g04738 Petunia axillaris HOM05D000092 ORTHO05D000042 1.2e-58 230.7 259 54.1
Nitab4.5_0000358g0090 Nicotiana tabacum HOM05D000092 ORTHO05D000042 2.8e-58 229.6 281 51.2
Peaxi162Scf00007g00431 Petunia axillaris HOM05D000092 ORTHO05D000042 8.1e-58 228.0 280 50.7
CAN.G641.2 Capsicum annuum HOM05D000092 ORTHO05D000042 3.1e-57 226.1 254 55.9
Peaxi162Scf00739g00123 Petunia axillaris HOM05D000092 ORTHO05D000042 3.4e-56 222.6 266 51.5
Solyc12g016220.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 7.5e-56 221.5 251 54.2
CAN.G1161.12 Capsicum annuum HOM05D000092 ORTHO05D000042 3.7e-55 219.2 175 66.9
Sopen01g028960 Solanum pennellii HOM05D000092 ORTHO05D000042 6.4e-55 218.4 251 53.4
PGSC0003DMG401008349 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.1e-54 217.6 253 52.2
CAN.G960.38 Capsicum annuum HOM05D000092 ORTHO05D000042 1.6e-53 213.8 225 57.8
Solyc10g055080.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.1e-49 199.5 251 49.8
Solyc10g055060.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 9.9e-48 194.5 251 49.0
Sopen12g008030 Solanum pennellii HOM05D000092 ORTHO05D000042 3.7e-47 192.6 243 51.4
Sopen12g022450 Solanum pennellii HOM05D000092 ORTHO05D000042 6.4e-47 191.8 244 48.8
Peaxi162Scf00000g00843 Petunia axillaris HOM05D000092 ORTHO05D001673 1.9e-46 190.3 319 41.7
CAN.G641.7 Capsicum annuum HOM05D000092 ORTHO05D000042 4.1e-46 189.1 254 48.8
Solyc12g044190.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.2e-45 187.6 251 46.6
PGSC0003DMG402011427 Solanum tuberosum HOM05D000092 ORTHO05D000042 4.6e-45 185.7 251 49.4
CAN.G960.21 Capsicum annuum HOM05D000092 ORTHO05D000042 1.0e-44 184.5 254 48.4
PGSC0003DMG400019094 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.4e-41 173.3 240 47.5
CAN.G1161.53 Capsicum annuum HOM05D000092 ORTHO05D000042 2.0e-40 170.2 197 57.4
Sopen10g029640 Solanum pennellii HOM05D000092 ORTHO05D000042 1.9e-38 163.7 249 45.4
Peaxi162Scf00003g00479 Petunia axillaris HOM05D000092 ORTHO05D000042 1.1e-33 147.9 241 44.8
Solyc10g050050.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.6e-32 143.3 191 47.1
PGSC0003DMG400011425 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.9e-30 137.1 242 40.9
Solyc10g055180.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.4e-30 136.7 189 45.0
Solyc02g036270.4 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.9e-27 127.1 135 54.8
CAN.G385.6 Capsicum annuum HOM05D000092 ORTHO05D000042 2.5e-27 126.7 129 52.7
PGSC0003DMG400028057 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.8e-26 123.2 251 37.8
Solyc02g036280.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.5e-21 106.3 69 68.1
CAN.G379.26 Capsicum annuum HOM05D000092 ORTHO05D000042 1.5e-19 100.9 152 45.4
Peaxi162Scf00253g00314 Petunia axillaris HOM05D000092 ORTHO05D000042 2.5e-19 100.1 184 36.4
Sopen10g024940 Solanum pennellii HOM05D000092 ORTHO05D000042 1.3e-15 87.8 72 68.1
Sopen10g029660 Solanum pennellii HOM05D000092 ORTHO05D000042 3.9e-12 76.3 261 31.0
Sopen04g018240 Solanum pennellii HOM05D000092 ORTHO05D000042 8.7e-12 75.1 116 37.1
PGSC0003DMG400028081 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.8e-10 70.1 60 58.3
Sopen00g006780 Solanum pennellii HOM05D000092 ORTHO05D000042 6.3e-10 68.9 71 52.1
Solyc10g055120.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.4e-09 67.8 51 72.5
HanXRQChr17g0550881 Helianthus annuus HOM05D000092 ORTHO05D000042 5.8e-08 62.4 251 26.7
PGSC0003DMG400010953 Solanum tuberosum HOM05D000092 ORTHO05D000042 7.6e-08 62.0 45 68.9
FAN16G0572 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.8e-07 59.7 216 25.0
FAN25G0354 Fragaria x ananassa HOM05D000092 ORTHO05D000042 6.5e-07 58.9 223 24.2
FvH4_7g31140 Fragaria vesca HOM05D000092 ORTHO05D000042 8.4e-07 58.5 269 23.4
FAN06G3901 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.4e-06 57.8 225 26.7
Solyc10g074640.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.9e-06 57.4 40 65.0
RcHm_v2.0_Chr7g0202501 Rosa chinensis HOM05D000092 ORTHO05D000042 3.2e-06 56.6 237 26.2
FAN06G4836 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.2e-06 56.2 225 26.2
FAN06G5058 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.2e-06 56.2 225 26.2
Potri.013G027300 Populus trichocarpa HOM05D000092 ORTHO05D000042 4.2e-06 56.2 244 25.4
DCAR_001278 Daucus carota HOM05D000092 ORTHO05D000042 5.5e-06 55.8 172 23.8
Dinv20556 Davidia involucrata HOM05D000092 ORTHO05D000042 5.5e-06 55.8 170 28.8
Dinv20740 Davidia involucrata HOM05D000092 ORTHO05D000042 5.5e-06 55.8 170 28.8


User provided reference genes

Program Settings