Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 1.1e-148 530.0 289 100.0
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 5.2e-146 521.2 289 97.2
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 6.6e-141 504.2 291 95.5
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 2.0e-129 466.1 273 86.4
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 9.2e-127 457.2 271 85.2
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 1.6e-126 456.4 266 85.3
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 4.3e-124 448.4 282 81.6
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 2.3e-109 399.4 276 73.2
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 7.4e-108 394.4 262 74.8
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 7.4e-108 394.4 263 72.6
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 1.6e-107 393.3 264 74.2
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 2.1e-107 392.9 270 73.3
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 2.8e-107 392.5 254 76.0
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 1.1e-106 390.6 260 75.4
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 3.1e-106 389.0 264 72.3
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 9.0e-106 387.5 259 74.9
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 1.2e-105 387.1 259 73.4
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 1.5e-105 386.7 264 72.7
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 2.6e-105 386.0 265 73.6
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 5.8e-105 384.8 254 75.2
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 7.6e-105 384.4 260 73.8
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 2.2e-104 382.9 267 71.2
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 4.9e-104 381.7 254 74.0
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 4.9e-104 381.7 266 69.9
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 1.4e-103 380.2 257 73.5
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.9e-103 379.8 295 67.1
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 2.5e-103 379.4 261 72.4
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 3.2e-103 379.0 287 67.9
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 9.3e-103 377.5 269 70.3
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 1.6e-102 376.7 266 70.3
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 3.5e-102 375.6 262 71.8
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 1.0e-101 374.0 270 69.3
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 1.3e-101 373.6 252 71.0
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 2.3e-101 372.9 259 69.9
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.1e-100 370.5 261 71.3
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 1.9e-100 369.8 261 72.4
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 3.3e-100 369.0 272 68.8
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 5.6e-100 368.2 265 72.1
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 7.4e-100 367.9 227 79.3
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 2.8e-99 365.9 263 70.3
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 3.7e-99 365.5 254 70.1
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 6.2e-99 364.8 267 67.4
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 1.4e-98 363.6 234 74.8
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 2.4e-98 362.8 248 72.2
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 4.0e-98 362.1 265 69.4
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 4.0e-98 362.1 246 73.6
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 5.3e-98 361.7 305 62.6
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 9.0e-98 360.9 268 66.4
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.5e-97 360.1 248 71.8
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 1.5e-97 360.1 236 73.3
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 1.5e-97 360.1 262 67.9
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 3.4e-97 359.0 262 67.6
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 4.5e-97 358.6 269 67.7
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 4.5e-97 358.6 260 67.7
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 5.8e-97 358.2 257 68.5
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 1.0e-96 357.5 268 66.8
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 1.3e-96 357.1 262 67.6
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 2.9e-96 355.9 259 68.3
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 4.9e-96 355.1 261 68.2
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 4.9e-96 355.1 268 65.7
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 6.5e-96 354.8 260 67.3
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 1.4e-95 353.6 256 68.8
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.9e-95 353.2 261 67.8
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 9.3e-95 350.9 266 66.5
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 1.6e-94 350.1 255 69.0
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 2.7e-94 349.4 261 67.4
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 4.6e-94 348.6 263 67.7
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 6.0e-94 348.2 288 61.8
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 7.9e-94 347.8 249 68.7
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 1.3e-93 347.1 263 66.2
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 1.3e-93 347.1 262 66.4
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 2.3e-93 346.3 261 67.0
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 6.7e-93 344.7 261 67.0
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 5.7e-92 341.7 231 71.9
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 2.2e-91 339.7 251 65.3
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 3.7e-91 339.0 251 65.3
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 4.8e-91 338.6 256 65.2
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 1.1e-90 337.4 251 66.1
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 1.1e-90 337.4 250 65.2
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 1.1e-90 337.4 251 65.3
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 1.1e-90 337.4 250 65.2
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 1.8e-90 336.7 226 72.6
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 9.0e-90 334.3 250 64.4
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 4.5e-89 332.0 258 65.5
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 5.0e-88 328.6 256 64.1
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 1.2e-86 323.9 231 68.0
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 2.1e-86 323.2 257 65.8
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 7.9e-86 321.2 224 70.1
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 1.4e-85 320.5 228 69.7
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 1.8e-85 320.1 258 64.0
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 1.5e-84 317.0 263 62.0
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.3e-83 313.9 241 65.1
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 2.8e-83 312.8 230 67.4
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.5e-81 307.0 230 66.5
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 3.4e-81 305.8 281 59.8
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 4.5e-81 305.4 225 65.8
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 4.5e-81 305.4 274 57.3
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 8.5e-80 301.2 231 62.8
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 9.7e-76 287.7 258 58.9
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 1.4e-74 283.9 241 60.6
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 5.3e-74 282.0 229 62.9
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 5.9e-73 278.5 257 54.5
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 2.9e-72 276.2 179 74.3
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 1.6e-70 270.4 256 55.5
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 3.3e-68 262.7 228 59.6
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.8e-59 233.0 204 55.4
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 5.3e-58 228.8 242 51.7
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 2.5e-55 219.9 196 56.1
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 9.4e-55 218.0 148 73.0
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 3.5e-49 199.5 215 50.7
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 2.3e-29 133.7 224 36.6
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.6e-22 110.9 93 64.5
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 8.1e-22 108.6 122 51.6
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 1.1e-18 98.2 228 30.3
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 8.1e-14 82.0 57 66.7
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 8.1e-14 82.0 57 66.7
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 7.1e-10 68.9 230 27.8


User provided reference genes

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