Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g051885.1 Solanum lycopersicum HOM05D008903 ORTHO05D011660 7.4e-286 986.5 490 100.0
PGSC0003DMG401016557 Solanum tuberosum HOM05D008903 ORTHO05D011660 4.5e-190 668.3 436 78.7
Solyc05g006290.2 Solanum lycopersicum HOM05D008903 ORTHO05D011660 6.9e-175 617.8 432 73.4
Solyc05g006380.1 Solanum lycopersicum HOM05D008903 ORTHO05D011660 6.3e-75 285.8 421 41.3
Nitab4.5_0000257g0010 Nicotiana tabacum HOM05D008903 ORTHO05D011660 1.6e-70 271.2 434 41.7
Nitab4.5_0001577g0020 Nicotiana tabacum HOM05D008903 ORTHO05D011660 5.1e-69 266.2 457 41.8
Nitab4.5_0000257g0020 Nicotiana tabacum HOM05D008903 ORTHO05D011660 3.3e-68 263.5 415 43.4
Peaxi162Scf00828g00022 Petunia axillaris HOM05D008903 ORTHO05D011660 9.4e-63 245.4 444 39.2
Nitab4.5_0002059g0040 Nicotiana tabacum HOM05D008903 ORTHO05D011660 1.4e-61 241.5 430 40.7
Peaxi162Scf01141g00031 Petunia axillaris HOM05D008903 ORTHO05D011660 4.3e-60 236.5 438 39.7
Peaxi162Scf00408g00319 Petunia axillaris HOM05D008903 ORTHO05D011660 1.1e-52 211.8 449 37.6
PGSC0003DMG400044936 Solanum tuberosum HOM05D008903 ORTHO05D019318 6.3e-51 206.1 354 42.4
Peaxi162Scf01141g00035 Petunia axillaris HOM05D008903 ORTHO05D011660 7.7e-49 199.1 445 38.0
Nitab4.5_0002059g0060 Nicotiana tabacum HOM05D008903 ORTHO05D011660 9.4e-47 192.2 364 41.2
Sopen04g023230 Solanum pennellii HOM05D008903 ORTHO05D011660 1.6e-46 191.4 97 97.9
PGSC0003DMG400015586 Solanum tuberosum HOM05D008903 ORTHO05D011660 2.8e-43 180.6 108 84.3
Nitab4.5_0000257g0070 Nicotiana tabacum HOM05D008903 ORTHO05D019318 3.7e-43 180.3 339 40.7
Peaxi162Scf01141g00008 Petunia axillaris HOM05D000502 ORTHO05D000356 6.5e-40 169.5 281 40.9
Solyc05g006285.1 Solanum lycopersicum HOM05D008903 ORTHO05D011660 5.2e-37 159.8 119 65.5
PGSC0003DMG400041430 Solanum tuberosum HOM05D008903 ORTHO05D019318 6.3e-35 152.9 194 45.9
Peaxi162Scf01141g00032 Petunia axillaris HOM05D008903 ORTHO05D011660 2.2e-32 144.4 439 32.6
Solyc05g006300.1 Solanum lycopersicum HOM05D008903 ORTHO05D011660 2.2e-32 144.4 109 69.7
Solyc05g006280.1 Solanum lycopersicum HOM05D008903 ORTHO05D011660 2.9e-32 144.1 108 70.4
Nitab4.5_0001142g0130 Nicotiana tabacum HOM05D008903 ORTHO05D011660 8.5e-32 142.5 435 30.3
Sopen05g002270 Solanum pennellii HOM05D008903 ORTHO05D011660 1.7e-27 128.3 99 70.7
Peaxi162Scf00828g00023 Petunia axillaris HOM05D008903 ORTHO05D011660 3.1e-26 124.0 302 32.1
Nitab4.5_0004310g0030 Nicotiana tabacum HOM05D008903 ORTHO05D011660 5.9e-25 119.8 202 41.6
PGSC0003DMG400039045 Solanum tuberosum HOM05D008903 ORTHO05D019318 1.8e-21 108.2 121 51.2
Peaxi162Scf01141g00030 Petunia axillaris HOM05D008903 ORTHO05D019318 5.2e-21 106.7 126 50.8
QL05p018582 Quercus lobata HOM05D001477 ORTHO05D001182 8.9e-21 105.9 462 27.9
CiPaw.01G227900 Carya illinoinensis HOM05D001477 ORTHO05D001182 1.3e-19 102.1 451 27.1
QL05p016344 Quercus lobata HOM05D001477 ORTHO05D001182 6.4e-19 99.8 447 28.4
PGSC0003DMG400039371 Solanum tuberosum HOM05D008903 ORTHO05D019318 2.4e-18 97.8 113 49.6
Haze_15913 Corylus avellana HOM05D001477 ORTHO05D001182 7.8e-17 92.8 354 27.1
QL02p094064 Quercus lobata HOM05D001477 ORTHO05D001182 7.8e-17 92.8 404 28.0
PGSC0003DMG400043542 Solanum tuberosum HOM05D008903 ORTHO05D011660 1.7e-16 91.7 150 40.0
Potri.012G099400 Populus trichocarpa HOM05D001477 ORTHO05D001182 3.9e-16 90.5 493 23.9
Haze_18899 Corylus avellana HOM05D001477 ORTHO05D001182 8.6e-16 89.4 332 27.4
PGSC0003DMG400041867 Solanum tuberosum HOM05D008903 ORTHO05D019318 1.1e-15 89.0 90 54.4
CAN.G438.102 Capsicum annuum HOM05D009966 ORTHO05D012083 4.3e-15 87.0 335 27.5
PGSC0003DMG401005699 Solanum tuberosum HOM05D009966 ORTHO05D012083 4.3e-15 87.0 339 27.4
Atru.chr6.1369 Acer truncatum HOM05D001477 ORTHO05D001182 5.6e-15 86.7 337 27.3
MD17G1178500 Malus domestica HOM05D001477 ORTHO05D001182 1.2e-14 85.5 324 27.2
CiPaw.15G162600 Carya illinoinensis HOM05D001477 ORTHO05D001182 1.6e-14 85.1 344 25.6
EL10Ac2g04568 Beta vulgaris HOM05D001477 ORTHO05D001182 2.8e-14 84.3 450 24.4
PGSC0003DMG400002600 Solanum tuberosum HOM05D001477 ORTHO05D001182 1.8e-13 81.6 221 31.2
Sopen03g038770 Solanum pennellii HOM05D009966 ORTHO05D012083 2.3e-13 81.3 343 27.4
Sopen03g040100 Solanum pennellii HOM05D001477 ORTHO05D001182 4.0e-13 80.5 221 30.8
Nitab4.5_0003716g0030 Nicotiana tabacum HOM05D009966 ORTHO05D012083 5.2e-13 80.1 375 25.3
PGSC0003DMG400005634 Solanum tuberosum HOM05D009966 ORTHO05D012083 5.2e-13 80.1 321 25.5
Solyc03g121290.4 Solanum lycopersicum HOM05D001477 ORTHO05D001182 6.8e-13 79.7 221 31.2
PGSC0003DMG402005699 Solanum tuberosum HOM05D009966 ORTHO05D012083 6.8e-13 79.7 344 27.6
PGR031G0401 Punica granatum HOM05D001477 ORTHO05D001182 8.9e-13 79.3 337 24.0
PGSC0003DMG400009532 Solanum tuberosum HOM05D001477 ORTHO05D001182 4.4e-12 77.0 344 26.2
AUR62023315 Chenopodium quinoa HOM05D001477 ORTHO05D001182 5.8e-12 76.6 470 23.2
Prupe.3G053600 Prunus persica HOM05D001477 ORTHO05D001182 5.8e-12 76.6 360 23.9
CAN.G438.101 Capsicum annuum HOM05D009966 ORTHO05D012083 9.8e-12 75.9 235 31.5
QL08p037386 Quercus lobata HOM05D001477 ORTHO05D001182 1.7e-11 75.1 401 25.4
HanXRQChr09g0276031 Helianthus annuus HOM05D001477 ORTHO05D001182 2.9e-11 74.3 241 28.2
Solyc03g119890.4 Solanum lycopersicum HOM05D009966 ORTHO05D012083 2.9e-11 74.3 229 31.0
ClCG07G013540 Citrullus lanatus HOM05D001477 ORTHO05D001182 3.7e-11 73.9 347 23.6
Ciclev10000694m.g Citrus clementina HOM05D001477 ORTHO05D001182 4.9e-11 73.6 368 25.0
Ciclev10025305m.g Citrus clementina HOM05D001477 ORTHO05D001182 4.9e-11 73.6 467 25.1
Sabra17G0122500 Salix brachista HOM05D001477 ORTHO05D001182 6.4e-11 73.2 488 24.2
Nitab4.5_0006071g0070 Nicotiana tabacum HOM05D001477 ORTHO05D001182 1.1e-10 72.4 232 27.2
Sabra17G0122000 Salix brachista HOM05D001477 ORTHO05D001182 1.9e-10 71.6 464 24.1
Nitab4.5_0005149g0060 Nicotiana tabacum HOM05D008903 ORTHO05D019318 4.1e-10 70.5 84 47.6
Sopen07g028490 Solanum pennellii HOM05D009599 ORTHO05D011640 4.1e-10 70.5 333 27.3
ECA232G5008 Erigeron canadensis HOM05D000862 ORTHO05D000943 5.4e-10 70.1 387 24.8
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 7.0e-10 69.7 264 24.6
Haze_00867 Corylus avellana HOM05D001477 ORTHO05D001182 7.0e-10 69.7 324 25.3
Cpa.g.sc116.90 Carica papaya HOM05D001477 ORTHO05D001182 9.2e-10 69.3 304 26.0
Manes.07G068500 Manihot esculenta HOM05D001477 ORTHO05D001182 9.2e-10 69.3 334 23.4
PGR083G0024 Punica granatum HOM05D001477 ORTHO05D001182 1.6e-09 68.6 301 26.2
PGR083G2101 Punica granatum HOM05D001477 ORTHO05D001182 1.6e-09 68.6 485 24.5
Potri.001G395000 Populus trichocarpa HOM05D001477 ORTHO05D001182 3.5e-09 67.4 479 23.4
Cfa015667 Carpinus fangiana HOM05D001477 ORTHO05D001182 4.6e-09 67.0 328 25.6
QL01p017812 Quercus lobata HOM05D001477 ORTHO05D001182 4.6e-09 67.0 303 24.8
AUR62023316 Chenopodium quinoa HOM05D001477 ORTHO05D001182 7.8e-09 66.2 465 22.6
HanXRQChr12g0365511 Helianthus annuus HOM05D001477 ORTHO05D001182 7.8e-09 66.2 335 24.5
CsaV3_3G044110 Cucumis sativus L. HOM05D001477 ORTHO05D001182 1.0e-08 65.9 351 22.8
PGSC0003DMG401026447 Solanum tuberosum HOM05D012574 ORTHO05D001182 1.3e-08 65.5 238 28.6
ECA234G3029 Erigeron canadensis HOM05D000312 ORTHO05D000221 1.7e-08 65.1 283 25.8
Hma1.2p1_0978F.1_g243340 Hydrangea macrophylla HOM05D001477 ORTHO05D001182 1.7e-08 65.1 490 23.3
vmacro19298 Vaccinium macrocarpon HOM05D001477 ORTHO05D001182 1.7e-08 65.1 360 26.4
Nitab4.5_0000257g0110 Nicotiana tabacum HOM05D008903 ORTHO05D011660 2.3e-08 64.7 67 53.7
Nitab4.5_0003218g0100 Nicotiana tabacum HOM05D012574 ORTHO05D001182 2.3e-08 64.7 170 32.4
QL04p079456 Quercus lobata HOM05D001477 ORTHO05D001182 3.0e-08 64.3 302 25.5
Atru.chr1.2844 Acer truncatum HOM05D001477 ORTHO05D001182 3.9e-08 63.9 199 27.1
FAN21G2862 Fragaria x ananassa HOM05D000312 ORTHO05D000221 3.9e-08 63.9 258 28.3
Haze_18944 Corylus avellana HOM05D001477 ORTHO05D001182 6.6e-08 63.2 291 27.8
Sabra17G0122200 Salix brachista HOM05D001477 ORTHO05D001182 6.6e-08 63.2 486 24.5
Sabra17G0122700 Salix brachista HOM05D001477 ORTHO05D001182 6.6e-08 63.2 306 24.5
MELO3C013024.2 Cucumis melo HOM05D001477 ORTHO05D001182 8.6e-08 62.8 356 22.2
Nitab4.5_0000410g0280 Nicotiana tabacum HOM05D009966 ORTHO05D012083 8.6e-08 62.8 358 26.0
CSS0028141 Camellia sinensis var. sinensis HOM05D001477 ORTHO05D001182 1.1e-07 62.4 167 30.5
Cfa014267 Carpinus fangiana HOM05D001477 ORTHO05D001182 1.1e-07 62.4 294 26.9
PGR083G1680 Punica granatum HOM05D001477 ORTHO05D001182 1.5e-07 62.0 200 28.5
ECA247G1279 Erigeron canadensis HOM05D001477 ORTHO05D001182 1.9e-07 61.6 332 25.0
PGR083G1995 Punica granatum HOM05D001477 ORTHO05D001182 2.5e-07 61.2 235 26.8
QL05p032382 Quercus lobata HOM05D001477 ORTHO05D001182 2.5e-07 61.2 175 27.4
QL05p033764 Quercus lobata HOM05D001477 ORTHO05D001182 2.5e-07 61.2 175 27.4
Ciclev10031194m.g Citrus clementina HOM05D001477 ORTHO05D001182 3.3e-07 60.8 321 23.1
FvH4_3g20160 Fragaria vesca HOM05D000312 ORTHO05D000221 3.3e-07 60.8 317 26.5
Solyc07g054590.1 Solanum lycopersicum HOM05D009599 ORTHO05D011640 9.5e-07 59.3 314 26.4
EL10Ac9g21142 Beta vulgaris HOM05D001477 ORTHO05D001182 1.2e-06 58.9 217 24.9
arahy.Tifrunner.gnm1.ann1.YWW6BT Arachis hypogaea HOM05D001477 ORTHO05D001182 1.6e-06 58.5 498 25.5
QL11p055690 Quercus lobata HOM05D001477 ORTHO05D001182 3.6e-06 57.4 348 24.7
Migut.M01792 Erythranthe guttata HOM05D000051 ORTHO05D000015 6.2e-06 56.6 211 25.6
Cfa020769 Carpinus fangiana HOM05D001477 ORTHO05D001182 8.1e-06 56.2 340 24.7
AUR62043062 Chenopodium quinoa HOM05D000051 ORTHO05D001182 8.1e-06 56.2 233 30.0
Cc05_g11410 Coffea canephora HOM05D001477 ORTHO05D001182 8.1e-06 56.2 220 25.5
Peaxi162Scf00007g02848 Petunia axillaris HOM05D009599 ORTHO05D011640 8.1e-06 56.2 288 22.9
GSVIVG01016843001 Vitis vinifera HOM05D001477 ORTHO05D001182 8.1e-06 56.2 247 24.7


User provided reference genes

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