Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 5.0e-69 264.2 127 100.0
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 1.1e-68 263.1 127 99.2
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 1.9e-68 262.3 125 100.0
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 3.6e-67 258.1 127 96.9
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 2.2e-64 248.8 127 93.7
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 4.1e-63 244.6 127 92.1
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 9.2e-63 243.4 127 88.2
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.2e-62 243.0 122 91.8
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 1.6e-62 242.7 123 91.1
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 2.7e-62 241.9 127 89.8
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.7e-62 241.9 123 91.1
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 3.5e-62 241.5 127 88.2
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.5e-62 241.5 127 86.6
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 4.6e-62 241.1 127 86.6
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 4.6e-62 241.1 126 87.3
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 6.0e-62 240.7 127 86.6
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 6.0e-62 240.7 123 90.2
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 1.0e-61 240.0 127 86.6
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 1.0e-61 240.0 127 88.2
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.3e-61 239.6 127 88.2
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 1.3e-61 239.6 121 91.7
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 1.3e-61 239.6 126 87.3
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 1.7e-61 239.2 126 86.5
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 2.3e-61 238.8 123 89.4
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 2.3e-61 238.8 121 92.6
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 2.3e-61 238.8 121 92.6
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.3e-61 238.8 115 97.4
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 3.0e-61 238.4 123 87.8
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 3.0e-61 238.4 127 87.4
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 3.0e-61 238.4 122 86.9
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 3.0e-61 238.4 127 87.4
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 3.0e-61 238.4 122 86.9
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 3.9e-61 238.0 127 85.0
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 3.9e-61 238.0 127 85.8
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 5.1e-61 237.7 123 89.4
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 6.6e-61 237.3 123 89.4
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 8.6e-61 236.9 126 88.1
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.1e-60 236.5 127 85.8
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.1e-60 236.5 123 86.2
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.1e-60 236.5 127 85.8
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 1.1e-60 236.5 127 85.0
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 1.5e-60 236.1 127 86.6
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.5e-60 236.1 123 85.4
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 1.5e-60 236.1 127 85.0
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 1.9e-60 235.7 123 87.8
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.3e-60 235.0 123 84.6
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 4.3e-60 234.6 127 85.0
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 4.3e-60 234.6 123 84.6
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 4.3e-60 234.6 125 87.2
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 4.3e-60 234.6 123 87.0
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 5.6e-60 234.2 123 87.0
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 5.6e-60 234.2 127 86.6
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 5.6e-60 234.2 127 85.8
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 7.3e-60 233.8 123 87.0
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 9.5e-60 233.4 119 89.1
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.6e-59 232.6 123 82.9
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 2.1e-59 232.3 123 88.6
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 3.6e-59 231.5 127 85.0
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.6e-59 231.5 127 85.0
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.6e-59 231.5 127 85.0
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.6e-59 231.5 127 85.0
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.6e-59 231.5 127 85.0
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 3.6e-59 231.5 126 81.7
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 4.7e-59 231.1 123 85.4
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 4.7e-59 231.1 124 85.5
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 6.2e-59 230.7 123 86.2
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 8.1e-59 230.3 124 83.9
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 8.1e-59 230.3 127 85.0
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 1.1e-58 229.9 126 84.1
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 1.1e-58 229.9 122 83.6
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 1.1e-58 229.9 127 82.7
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 1.4e-58 229.6 122 83.6
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 1.4e-58 229.6 123 87.0
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 1.8e-58 229.2 127 84.3
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 1.8e-58 229.2 123 85.4
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 1.8e-58 229.2 123 85.4
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 1.8e-58 229.2 123 85.4
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 1.8e-58 229.2 123 85.4
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 1.8e-58 229.2 123 85.4
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 1.8e-58 229.2 123 84.6
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 1.8e-58 229.2 123 87.0
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 1.8e-58 229.2 123 85.4
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 2.4e-58 228.8 122 82.8
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 3.1e-58 228.4 127 83.5
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 3.1e-58 228.4 122 83.6
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 5.2e-58 227.6 127 83.5
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 6.8e-58 227.3 122 82.8
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 1.5e-57 226.1 123 82.1
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 2.0e-57 225.7 123 82.1
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 2.6e-57 225.3 125 83.2
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 2.6e-57 225.3 123 84.6
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 2.6e-57 225.3 124 83.1
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 5.8e-57 224.2 122 79.5
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 7.6e-57 223.8 123 81.3
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 7.6e-57 223.8 123 79.7
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 7.6e-57 223.8 123 82.9
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 9.9e-57 223.4 123 79.7
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 1.3e-56 223.0 123 80.5
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 1.3e-56 223.0 121 84.3
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.3e-56 223.0 115 87.0
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.7e-56 222.6 107 98.1
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 2.2e-56 222.2 122 82.8
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.2e-56 222.2 123 80.5
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 2.9e-56 221.9 122 78.7
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 4.9e-56 221.1 123 80.5
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 8.4e-56 220.3 123 82.9
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 8.4e-56 220.3 122 81.1
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 1.4e-55 219.5 129 77.5
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 1.9e-55 219.2 123 81.3
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 2.4e-55 218.8 123 79.7
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 3.2e-55 218.4 123 80.5
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 3.2e-55 218.4 123 78.9
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 3.2e-55 218.4 123 78.0
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 3.2e-55 218.4 123 80.5
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 4.1e-55 218.0 123 79.7
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 4.1e-55 218.0 123 78.9
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 5.4e-55 217.6 124 82.3
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 9.2e-55 216.9 126 78.6
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 9.2e-55 216.9 122 77.9
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 7.8e-54 213.8 123 77.2
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 3.9e-53 211.5 123 78.0
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 2.5e-52 208.8 107 91.6
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 3.3e-52 208.4 118 78.0
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.6e-51 206.1 123 76.4
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 1.6e-51 206.1 124 76.6
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 2.8e-51 205.3 120 78.3
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 8.1e-51 203.8 110 85.5
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 1.8e-50 202.6 115 82.6
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 3.1e-50 201.8 112 83.0
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 5.2e-50 201.1 112 82.1
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 2.0e-49 199.1 128 74.2
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 3.4e-49 198.4 101 91.1
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 2.2e-48 195.7 103 86.4
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 4.9e-48 194.5 111 81.1
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 6.0e-46 187.6 124 72.6
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 7.8e-46 187.2 131 69.5
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 5.1e-45 184.5 122 68.0
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.9e-44 182.6 90 93.3
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 2.5e-44 182.2 102 86.3
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.3e-43 179.9 98 82.7
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.3e-43 179.9 98 83.7
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.1e-42 176.8 98 86.7
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 9.0e-42 173.7 123 65.0
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 7.6e-41 170.6 124 61.3
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 2.2e-40 169.1 120 63.3
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.2e-40 169.1 102 78.4
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 7.1e-39 164.1 88 81.8
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 2.3e-37 159.1 129 62.0
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 2.0e-33 146.0 120 55.8
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.9e-32 142.1 67 92.5
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 8.4e-32 140.6 122 56.6
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 3.5e-30 135.2 122 52.5
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.3e-28 128.6 114 58.8
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 7.4e-28 127.5 108 60.2
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 3.1e-26 122.1 57 89.5
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 6.5e-24 114.4 62 85.5
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 1.6e-22 109.8 74 58.1
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 2.3e-21 105.9 126 43.7
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 1.5e-20 103.2 105 46.7
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 9.7e-20 100.5 72 56.9
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 5.0e-16 88.2 47 85.1
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 1.5e-12 76.6 35 97.1
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 3.4e-09 65.5 32 87.5
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 1.7e-08 63.2 35 74.3
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 6.5e-08 61.2 33 78.8


User provided reference genes

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