Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g051600.4 Solanum lycopersicum HOM05D000219 ORTHO05D004649 0.0e+00 1087.0 534 100.0
Sopen04g022970 Solanum pennellii HOM05D000219 ORTHO05D004649 4.5e-268 927.5 480 94.8
CAN.G1235.19 Capsicum annuum HOM05D000219 ORTHO05D004649 2.4e-237 825.5 479 83.3
Peaxi162Scf00106g01118 Petunia axillaris HOM05D000219 ORTHO05D004649 4.5e-220 768.1 490 77.3
Nitab4.5_0009050g0040 Nicotiana tabacum HOM05D000219 ORTHO05D004649 8.0e-217 757.3 485 78.1
Nitab4.5_0000184g0150 Nicotiana tabacum HOM05D000219 ORTHO05D004649 1.2e-215 753.4 483 78.9
Dinv19467 Davidia involucrata HOM05D000219 ORTHO05D004649 8.6e-203 710.7 483 69.6
CAN.G1044.3 Capsicum annuum HOM05D000219 ORTHO05D004649 4.0e-200 701.8 416 84.6
Ciclev10027573m.g Citrus clementina HOM05D000219 ORTHO05D004649 1.4e-197 693.3 488 67.6
Cc07_g16490 Coffea canephora HOM05D000219 ORTHO05D004649 1.0e-195 687.2 480 67.5
GSVIVG01022253001 Vitis vinifera HOM05D000219 ORTHO05D004649 1.7e-195 686.4 478 69.0
TAR625G1522 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.1e-194 683.7 480 67.9
Oeu027201.4 Olea europaea HOM05D000219 ORTHO05D004649 7.3e-194 681.0 483 68.5
PGSC0003DMG400031193 Solanum tuberosum HOM05D000219 ORTHO05D004649 9.5e-194 680.6 481 73.8
Oeu035604.1 Olea europaea HOM05D000219 ORTHO05D004649 2.1e-193 679.5 483 67.7
Manes.11G020000 Manihot esculenta HOM05D000219 ORTHO05D004649 3.6e-193 678.7 478 67.8
TWI79G1233 Tripterygium wilfordii HOM05D000219 ORTHO05D004649 1.1e-192 677.2 479 68.5
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 2.3e-192 676.0 480 68.1
Potri.002G233300 Populus trichocarpa HOM05D000219 ORTHO05D004649 2.6e-191 672.5 480 67.3
QL06p031679 Quercus lobata HOM05D000219 ORTHO05D004649 3.4e-191 672.2 479 68.3
CSS0031787 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D004649 1.7e-190 669.8 482 66.2
HanXRQChr10g0311141 Helianthus annuus HOM05D000219 ORTHO05D004649 1.7e-190 669.8 480 68.1
SalBow6G5746 Salvia bowleyana HOM05D000219 ORTHO05D004649 8.3e-190 667.5 483 66.5
THA.LOC104800903 Tarenaya hassleriana HOM05D000219 ORTHO05D004649 4.1e-189 665.2 479 66.8
Duzib235G0760 Durio zibethinus HOM05D000219 ORTHO05D004649 5.4e-189 664.8 480 67.5
AT2G32320 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 7.0e-189 664.5 479 66.2
COL.COLO4_16836 Corchorus olitorius HOM05D000219 ORTHO05D004649 1.0e-187 660.6 487 67.1
Carub.0004s1368 Capsella rubella HOM05D000219 ORTHO05D004649 1.3e-187 660.2 479 65.1
Thhalv10016524m.g Eutrema salsugineum HOM05D000219 ORTHO05D004649 6.6e-187 657.9 482 64.9
Carub.0004s1193 Capsella rubella HOM05D000219 ORTHO05D004649 1.5e-186 656.8 479 64.9
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 1.9e-186 656.4 479 64.7
MSTRG.2524 Avicennia marina HOM05D000219 ORTHO05D004649 1.9e-186 656.4 483 67.1
Gohir.A05G170300 Gossypium hirsutum HOM05D000219 ORTHO05D004649 2.5e-186 656.0 480 66.9
Gorai.009G178600 Gossypium raimondii HOM05D000219 ORTHO05D004649 9.5e-186 654.1 480 66.5
BcaC02g11270 Brassica carinata HOM05D000219 ORTHO05D004649 2.1e-185 652.9 479 64.5
A03p17780 Brassica napus HOM05D000219 ORTHO05D004649 6.2e-185 651.4 479 63.7
C04p18270 Brassica napus HOM05D000219 ORTHO05D004649 6.2e-185 651.4 479 64.1
AL4G26840 Arabidopsis lyrata HOM05D000219 ORTHO05D004649 1.1e-184 650.6 479 64.5
Cfa002771 Carpinus fangiana HOM05D000219 ORTHO05D004649 1.1e-184 650.6 479 67.0
Prupe.1G573900 Prunus persica HOM05D000219 ORTHO05D004649 1.8e-184 649.8 479 64.9
Eucgr.H04885 Eucalyptus grandis HOM05D000219 ORTHO05D004649 2.3e-184 649.4 479 65.6
Carub.0004s1289 Capsella rubella HOM05D000219 ORTHO05D004649 3.1e-184 649.0 478 64.6
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 3.1e-184 649.0 479 66.2
BcaB02g10403 Brassica carinata HOM05D000219 ORTHO05D004649 4.0e-184 648.7 479 64.1
CANSAT64G2196 Cannabis sativa HOM05D000219 ORTHO05D004649 6.8e-184 647.9 480 65.4
Rhsim10G0148200 Rhododendron simsii HOM05D000219 ORTHO05D004649 8.9e-184 647.5 485 64.3
Sp4g14010 Schrenkiella parvula HOM05D000219 ORTHO05D004649 2.0e-183 646.4 479 63.3
C03p20860 Brassica napus HOM05D000219 ORTHO05D004649 3.4e-183 645.6 479 63.5
SGA_v2.0_scaffold2G01286 Striga asiatica HOM05D000219 ORTHO05D004649 1.3e-182 643.7 484 64.3
CsaV3_6G042230 Cucumis sativus L. HOM05D000219 ORTHO05D004649 2.9e-182 642.5 480 63.8
FvH4_1g22971 Fragaria vesca HOM05D000219 ORTHO05D004649 4.9e-182 641.7 479 63.0
A05p13880 Brassica napus HOM05D000219 ORTHO05D004649 1.9e-181 639.8 485 62.7
unitig_899.g14613 Utricularia gibba HOM05D000219 ORTHO05D004649 2.4e-181 639.4 483 62.5
FvH4_2g15830 Fragaria vesca HOM05D000219 ORTHO05D004649 7.1e-181 637.9 477 63.7
BolC4t23384H Brassica oleracea HOM05D000219 ORTHO05D004649 1.6e-180 636.7 506 60.7
FAN24G0946 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.6e-180 636.7 477 63.5
MD05G1030700 Malus domestica HOM05D000219 ORTHO05D004649 1.7e-179 633.3 479 62.2
Sed0023684 Sechium edule HOM05D000219 ORTHO05D004649 3.0e-179 632.5 480 61.9
Sabra02G0178000 Salix brachista HOM05D000219 ORTHO05D004649 2.5e-178 629.4 569 56.4
BolC3t14438H Brassica oleracea HOM05D000219 ORTHO05D004649 4.3e-178 628.6 504 60.5
FAN23G1549 Fragaria x ananassa HOM05D000219 ORTHO05D004649 4.3e-178 628.6 488 61.1
BraA05t20324Z Brassica rapa HOM05D000219 ORTHO05D004649 9.5e-178 627.5 506 60.1
FAN20G1304 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.6e-177 626.7 479 63.0
BraA03t11042Z Brassica rapa HOM05D000219 ORTHO05D004649 2.1e-177 626.3 498 60.6
ClCG01G015950 Citrullus lanatus HOM05D000219 ORTHO05D004649 2.1e-177 626.3 513 59.8
Actinidia39311 Actinidia chinensis HOM05D000219 ORTHO05D004649 6.2e-177 624.8 478 63.8
FAN15G1293 Fragaria x ananassa HOM05D000219 ORTHO05D004649 4.0e-176 622.1 477 62.9
Sc05g0007990 Simmondsia chinensis HOM05D000219 ORTHO05D004649 9.9e-175 617.5 481 61.3
FAN26G0146 Fragaria x ananassa HOM05D000219 ORTHO05D004649 2.2e-174 616.3 479 61.0
DCAR_027131 Daucus carota HOM05D000219 ORTHO05D004649 1.9e-173 613.2 481 62.4
Thecc.06G220500 Theobroma cacao HOM05D000219 ORTHO05D004649 1.2e-172 610.5 448 66.3
Hund21266 Selenicereus undatus HOM05D000219 ORTHO05D004649 4.6e-172 608.6 461 62.0
MELO3C007464.2 Cucumis melo HOM05D000219 ORTHO05D004649 1.3e-171 607.1 480 60.0
Lj8A365T11 Lonicera japonica HOM05D000219 ORTHO05D004649 3.9e-171 605.5 471 62.4
VMungo0720G2488 Vigna mungo HOM05D000219 ORTHO05D004649 4.0e-168 595.5 482 60.6
arahy.Tifrunner.gnm1.ann1.M2QW19 Arachis hypogaea HOM05D000219 ORTHO05D004649 9.0e-168 594.3 491 58.0
arahy.Tifrunner.gnm1.ann1.V7J6Z4 Arachis hypogaea HOM05D000219 ORTHO05D004649 1.2e-167 594.0 491 58.2
Psat0s1144g0040 Pisum sativum HOM05D000219 ORTHO05D004649 1.5e-167 593.6 491 58.7
Phvul.010G125700 Phaseolus vulgaris HOM05D000219 ORTHO05D004649 2.6e-167 592.8 480 60.6
Hma1.2p1_0975F.1_g243180 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 3.4e-167 592.4 477 59.7
Glyma.10G001600 Glycine max HOM05D000219 ORTHO05D004649 5.8e-167 591.7 491 58.9
Lalb_Chr11g0075091 Lupinus albus HOM05D000219 ORTHO05D004649 5.8e-167 591.7 482 59.8
TPR.G6992 Trifolium pratense HOM05D000219 ORTHO05D004649 1.7e-166 590.1 491 58.9
Ca_09426_v3 Cicer arietinum L. HOM05D000219 ORTHO05D004649 2.9e-166 589.3 491 58.2
Psat7g054840 Pisum sativum HOM05D000219 ORTHO05D004649 2.4e-165 586.3 491 58.5
Medtr7g115250 Medicago truncatula HOM05D000219 ORTHO05D004649 3.2e-165 585.9 491 58.7
Atru.chr10.1102 Acer truncatum HOM05D000219 ORTHO05D004649 5.4e-165 585.1 388 70.9
Lj5g0005884 Lotus japonicus HOM05D000219 ORTHO05D004649 1.2e-164 583.9 491 57.6
Nn1g05995 Nelumbo nucifera HOM05D000219 ORTHO05D004649 3.5e-164 582.4 488 58.6
Lj6g0002222 Lotus japonicus HOM05D000219 ORTHO05D004649 4.6e-164 582.0 491 57.6
Glyma.16G091600 Glycine max HOM05D000219 ORTHO05D004649 1.0e-163 580.9 482 59.5
AUR62016924 Chenopodium quinoa HOM05D000219 ORTHO05D004649 5.6e-162 575.1 479 58.0
FAN27G2048 Fragaria x ananassa HOM05D000219 ORTHO05D004649 3.6e-161 572.4 479 59.5
CARHR008820 Cardamine hirsuta HOM05D000219 ORTHO05D004649 9.0e-160 567.8 403 65.5
Gohir.D05G173400 Gossypium hirsutum HOM05D000219 ORTHO05D004649 1.5e-159 567.0 404 67.3
AUR62013249 Chenopodium quinoa HOM05D000219 ORTHO05D004649 6.4e-158 561.6 479 56.8
AUR62010269 Chenopodium quinoa HOM05D000219 ORTHO05D004649 3.2e-157 559.3 479 57.0
AT2G31580 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 4.2e-157 558.9 417 63.8
Hma1.2p1_0252F.1_g102800 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 1.0e-155 554.3 488 57.0
vmacro12890 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 7.4e-154 548.1 658 46.4
Haze_25064 Corylus avellana HOM05D000219 ORTHO05D004649 1.6e-153 547.0 516 56.2
Lsat_1_v5_gn_7_9060 Lactuca sativa HOM05D000219 ORTHO05D004649 3.8e-150 535.8 476 56.5
RcHm_v2.0_Chr2g0117491 Rosa chinensis HOM05D000219 ORTHO05D004649 9.6e-146 521.2 371 65.2
COL.COLO4_17688 Corchorus olitorius HOM05D000219 ORTHO05D004649 4.8e-145 518.8 399 64.2
PGR102G3329 Punica granatum HOM05D000219 ORTHO05D004649 3.5e-140 502.7 376 63.3
vmacro14893 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 1.5e-130 470.7 540 48.5
Atru.chr10.1005 Acer truncatum HOM05D000219 ORTHO05D004649 3.1e-128 463.0 409 57.5
Os05g0535500 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D004649 1.5e-127 460.7 484 49.4
Migut.B00934 Erythranthe guttata HOM05D000219 ORTHO05D004649 2.6e-127 459.9 383 59.5
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 9.1e-120 434.9 333 62.2
TAR628G0592 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.6e-111 407.5 310 62.6
Haze_08455 Corylus avellana HOM05D000219 ORTHO05D004649 8.3e-105 385.2 344 56.7
EL10Ac8g20632 Beta vulgaris HOM05D000219 ORTHO05D004649 2.5e-101 373.6 484 43.8
Atru.chr10.1697 Acer truncatum HOM05D000219 ORTHO05D004649 1.2e-100 371.3 300 60.0
MBI04_g33333_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 2.4e-88 330.5 215 72.6
CANSAT01G1436 Cannabis sativa HOM05D000219 ORTHO05D004649 4.0e-83 313.2 246 60.2
RcHm_v2.0_Chr6g0279211 Rosa chinensis HOM05D000219 ORTHO05D004649 6.0e-79 299.3 268 54.9
PSO782G0604 Papaver somniferum HOM05D000219 ORTHO05D004649 2.3e-78 297.4 214 62.1
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 3.3e-77 293.5 213 62.4
Zm00001eb294000 Zea mays HOM05D000219 ORTHO05D004649 1.6e-76 291.2 322 46.3
PSO063G1486 Papaver somniferum HOM05D000219 ORTHO05D004649 1.8e-75 287.7 227 59.5
Aqoxy2G01146 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 5.2e-75 286.2 216 63.9
MBI05_g03455_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 8.9e-75 285.4 222 63.1
Aqoxy3G01228 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 1.5e-74 284.6 216 63.9
PGSC0003DMG402004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 2.6e-74 283.9 148 91.9
HPP92_021547 Vanilla planifolia HOM05D000219 ORTHO05D004649 2.6e-74 283.9 212 61.3
ATR0322G032 Amborella trichopoda HOM05D000219 ORTHO05D004649 1.1e-72 278.5 212 63.7
AagrBONN_evm.TU.Sc2ySwM_117.2004 Anthoceros agrestis HOM05D000219 ORTHO05D004649 1.9e-72 277.7 214 61.2
Glyma.16G117567 Glycine max HOM05D000219 ORTHO05D004649 1.7e-70 271.2 198 66.2
Mapoly0167s0023 Marchantia polymorpha HOM05D000219 ORTHO05D004649 1.1e-69 268.5 209 62.7
CBR_g11164 Chara braunii HOM05D000219 ORTHO05D004649 1.2e-68 265.0 210 58.6
PSO063G0175 Papaver somniferum HOM05D000219 ORTHO05D004649 1.1e-67 261.9 209 59.3
Pp3c1_10760 Physcomitrium patens HOM05D000219 ORTHO05D004649 8.9e-67 258.8 218 56.9
CDE06G2407 Ceratophyllum demersum HOM05D000219 ORTHO05D004649 1.1e-64 251.9 192 64.6
TAR628G0698 Trochodendron aralioides HOM05D000219 ORTHO05D004649 6.0e-63 246.1 161 74.5
Cre13.g581550 Chlamydomonas reinhardtii HOM05D000219 ORTHO05D004649 1.6e-60 238.0 209 55.0
Sopen04g022950 Solanum pennellii HOM05D000219 ORTHO05D000001 2.8e-60 237.3 185 68.1
AUR62014746 Chenopodium quinoa HOM05D000219 ORTHO05D004649 3.8e-57 226.9 209 52.2
PRCOL_00002092 Prasinoderma coloniale HOM05D000219 ORTHO05D004649 6.4e-57 226.1 210 52.9
Atru.chr10.1696 Acer truncatum HOM05D000219 ORTHO05D004649 3.2e-56 223.8 142 72.5
SMO146G0027 Selaginella moellendorffii HOM05D000219 ORTHO05D004649 7.1e-56 222.6 209 51.7
SHI31711 Sapria himalayana HOM05D000219 ORTHO05D004649 8.1e-52 209.1 168 54.8
Glyma.16G117633 Glycine max HOM05D000219 ORTHO05D004649 3.1e-51 207.2 206 53.9
Cfa023086 Carpinus fangiana HOM05D000219 ORTHO05D004649 1.2e-50 205.3 265 42.3
HPP92_021534 Vanilla planifolia HOM05D000219 ORTHO05D004649 3.2e-48 197.2 177 52.5
HanXRQChr10g0318971 Helianthus annuus HOM05D000219 ORTHO05D004649 4.6e-47 193.4 120 77.5
HPP92_021538 Vanilla planifolia HOM05D000219 ORTHO05D004649 3.2e-40 170.6 212 43.4
vmacro14894 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 1.7e-33 148.3 236 41.1
CARHR125230 Cardamine hirsuta HOM05D000219 ORTHO05D004649 1.9e-32 144.8 110 57.3
CAN.G555.5 Capsicum annuum HOM05D000219 ORTHO05D000137 1.6e-31 141.7 75 85.3
Haze_26924 Corylus avellana HOM05D000219 ORTHO05D004649 1.6e-31 141.7 161 43.5
AagrBONN_evm.TU.Sc2ySwM_344.3315 Anthoceros agrestis HOM05D000219 ORTHO05D004649 1.5e-29 135.2 129 51.9
Cpa.g.c44268 Carica papaya HOM05D000219 ORTHO05D004649 4.8e-28 130.2 70 78.6
PGSC0003DMG401004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 3.1e-27 127.5 130 56.2
HanXRQChr10g0318981 Helianthus annuus HOM05D000219 ORTHO05D004649 1.5e-26 125.2 119 49.6
SHI31709 Sapria himalayana HOM05D000219 ORTHO05D004649 7.1e-24 116.3 112 49.1
HanXRQChr10g0319001 Helianthus annuus HOM05D000219 ORTHO05D004649 7.9e-23 112.8 90 63.3
vmacro13881 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 7.9e-23 112.8 106 50.9
Lj7A96G45 Lonicera japonica HOM05D000219 ORTHO05D004649 5.1e-22 110.2 98 59.2
PGSC0003DMG400016550 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.1e-21 109.0 95 64.2
RcHm_v2.0_Chr2g0117501 Rosa chinensis HOM05D000219 ORTHO05D004649 2.8e-20 104.4 87 58.6
HanXRQChr10g0318991 Helianthus annuus HOM05D000219 ORTHO05D021059 4.8e-20 103.6 83 59.0
Nitab4.5_0005102g0050 Nicotiana tabacum HOM05D000219 ORTHO05D004649 6.3e-20 103.2 60 81.7
Atru.chr10.1103 Acer truncatum HOM05D000219 ORTHO05D004649 5.9e-18 96.7 59 69.5
PGSC0003DMG400020961 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.7e-17 95.1 54 79.6
GSVIVG01006301001 Vitis vinifera HOM05D000026 ORTHO05D000127 2.2e-17 94.7 111 44.1
vmacro20266 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 2.1e-15 88.2 144 37.5
Actinidia05378 Actinidia chinensis HOM05D000219 ORTHO05D004649 6.1e-15 86.7 55 67.3
Lj7A96T47 Lonicera japonica HOM05D000219 ORTHO05D004649 1.0e-14 85.9 51 66.7
CARHR125240 Cardamine hirsuta HOM05D000219 ORTHO05D004649 1.5e-13 82.0 95 46.3
AL4G27720 Arabidopsis lyrata HOM05D000219 ORTHO05D021059 2.8e-12 77.8 51 74.5
Atru.chr10.1695 Acer truncatum HOM05D000219 ORTHO05D021059 4.5e-10 70.5 81 39.5
Gohir.A03G040550 Gossypium hirsutum HOM05D000219 ORTHO05D021059 5.0e-09 67.0 68 47.1
PGSC0003DMG400020960 Solanum tuberosum HOM05D000219 ORTHO05D004649 8.5e-09 66.2 43 62.8
A07p24800 Brassica napus HOM05D000219 ORTHO05D017689 1.9e-08 65.1 79 44.3
BraA03t15335Z Brassica rapa HOM05D000219 ORTHO05D017689 1.9e-08 65.1 79 44.3
A02p19800 Brassica napus HOM05D000219 ORTHO05D017689 2.5e-08 64.7 79 44.3
C09p23930 Brassica napus HOM05D000219 ORTHO05D017689 2.7e-07 61.2 79 43.0
COL.COLO4_25028 Corchorus olitorius HOM05D000219 ORTHO05D004649 1.4e-06 58.9 43 62.8
Lj7A96T46 Lonicera japonica HOM05D000219 ORTHO05D004649 1.4e-06 58.9 42 59.5
Lj8A365T12 Lonicera japonica HOM05D000219 ORTHO05D004649 3.0e-06 57.8 33 75.8


User provided reference genes

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