Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g049897.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 6.8e-129 464.2 259 100.0
Solyc06g007395.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 6.2e-90 334.7 257 80.2
Sopen10g027790 Solanum pennellii HOM05D006921 ORTHO05D009185 5.6e-83 311.6 406 53.4
Solyc07g017545.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 5.5e-70 268.5 312 59.0
Sopen03g005240 Solanum pennellii HOM05D000017 ORTHO05D009185 1.0e-68 264.2 561 40.3
Sopen05g013990 Solanum pennellii HOM05D000017 ORTHO05D009185 1.5e-67 260.4 477 44.0
Sopen04g020440 Solanum pennellii HOM05D000017 ORTHO05D001349 1.6e-66 256.9 254 68.1
Sopen12g016630 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-59 233.0 628 35.2
Sopen01g027250 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-57 226.9 163 85.3
Sopen02g013230 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-57 226.9 163 85.3
Sopen02g036070 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-57 226.9 163 85.3
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-57 226.9 163 85.3
Sopen08g008450 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-57 226.9 163 85.9
Sopen08g030170 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-57 226.9 163 85.3
Sopen12g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-57 226.9 163 85.3
Sopen12g026920 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-57 226.9 163 85.3
Sopen02g003610 Solanum pennellii HOM05D000017 ORTHO05D000013 5.3e-57 225.3 163 84.7
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 5.3e-57 225.3 163 84.7
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 9.0e-57 224.6 247 63.6
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 9.0e-57 224.6 644 34.9
Sopen07g022780 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-56 223.8 159 84.9
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-56 223.4 163 84.7
Sopen08g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-56 222.6 669 33.8
Sopen04g025160 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-54 216.5 179 79.3
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 2.5e-54 216.5 179 79.3
Sopen08g021210 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-54 216.5 179 79.3
Sopen12g021170 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-54 216.5 179 79.3
Sopen09g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-54 214.9 159 83.6
Sopen10g006650 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-43 178.7 517 35.6
Sopen09g020850 Solanum pennellii HOM05D006921 ORTHO05D009185 3.8e-39 166.0 317 42.0
Sopen12g010990 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-38 163.7 154 69.5
Sopen12g012540 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-37 159.8 104 81.7
Sopen12g025000 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-37 158.7 362 38.1
Sopen01g026090 Solanum pennellii HOM05D006921 ORTHO05D009185 1.8e-36 157.1 104 80.8
Solyc03g044355.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 3.9e-36 156.0 103 84.5
PGSC0003DMG400017109 Solanum tuberosum HOM05D000017 ORTHO05D009185 2.6e-35 153.3 124 78.2
Sopen08g008170 Solanum pennellii HOM05D000017 ORTHO05D009185 6.5e-31 138.7 159 64.2
Sopen05g015150 Solanum pennellii HOM05D000017 ORTHO05D000013 8.8e-28 128.3 108 80.6
Solyc07g032784.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 3.4e-27 126.3 81 82.7
Solyc09g042673.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 2.4e-25 120.2 196 46.9
PGSC0003DMG400029070 Solanum tuberosum HOM05D006921 ORTHO05D009185 2.1e-21 107.1 86 68.6
Sopen01g015990 Solanum pennellii HOM05D000017 ORTHO05D009185 2.4e-17 93.6 66 77.3
Solyc11g017105.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 7.2e-14 82.0 67 64.2
PGSC0003DMG400042303 Solanum tuberosum HOM05D013282 ORTHO05D015744 1.6e-13 80.9 76 81.6
PGSC0003DMG400029950 Solanum tuberosum HOM05D000017 ORTHO05D009185 1.4e-12 77.8 101 52.5
Nitab4.5_0005016g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.2e-12 75.9 279 31.5
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 4.4e-11 72.8 86 50.0
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.7e-10 70.9 251 33.5
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 1.8e-09 67.4 92 46.7
Nitab4.5_0000113g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 4.1e-09 66.2 283 26.1
Nitab4.5_0004688g0070 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.4e-09 65.9 138 37.0
Peaxi162Scf00848g00013 Petunia axillaris HOM05D006921 ORTHO05D009185 9.2e-09 65.1 97 43.3
Nitab4.5_0007593g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.7e-08 63.5 85 47.1
Peaxi162Scf00145g01531 Petunia axillaris HOM05D006921 ORTHO05D009185 5.9e-08 62.4 72 52.8
Sopen08g012180 Solanum pennellii HOM05D000002 ORTHO05D009185 1.7e-07 60.8 102 39.2
Nitab4.5_0004599g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.3e-07 60.5 256 30.1
Peaxi162Scf00294g00624 Petunia axillaris HOM05D006921 ORTHO05D009185 1.1e-06 58.2 74 48.6
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.6e-06 55.8 98 39.8
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.3e-06 55.5 78 43.6


User provided reference genes

Program Settings