Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g048970.2 Solanum lycopersicum HOM05D000258 ORTHO05D392617 5.6e-26 120.2 60 100.0
PGSC0003DMG400016114 Solanum tuberosum HOM05D000258 ORTHO05D000153 8.9e-08 59.7 38 71.1
CAN.G1829.4 Capsicum annuum HOM05D000258 ORTHO05D000153 1.2e-07 59.3 59 55.9
arahy.Tifrunner.gnm1.ann1.G822GZ Arachis hypogaea HOM05D000258 ORTHO05D000153 2.6e-07 58.2 38 65.8
arahy.Tifrunner.gnm1.ann1.W6CP3H Arachis hypogaea HOM05D000258 ORTHO05D000153 2.6e-07 58.2 38 65.8
FAN28G2729 Fragaria x ananassa HOM05D000258 ORTHO05D000153 7.6e-07 56.6 38 65.8
AUR62018005 Chenopodium quinoa HOM05D000258 ORTHO05D000153 9.9e-07 56.2 38 65.8
PGSC0003DMG400005359 Solanum tuberosum HOM05D000258 ORTHO05D000153 2.9e-06 54.7 43 65.1
Ah.03g143240 Amaranthus hybridus HOM05D000258 ORTHO05D000153 3.7e-06 54.3 32 71.9
Prupe.6G206900 Prunus persica HOM05D000258 ORTHO05D000153 3.7e-06 54.3 38 60.5
ECA238G3186 Erigeron canadensis HOM05D000258 ORTHO05D000153 4.9e-06 53.9 32 78.1
Nitab4.5_0000402g0150 Nicotiana tabacum HOM05D000258 ORTHO05D000153 4.9e-06 53.9 34 64.7
Nitab4.5_0000402g0220 Nicotiana tabacum HOM05D000258 ORTHO05D000153 4.9e-06 53.9 43 58.1
PGSC0003DMG400015677 Solanum tuberosum HOM05D000258 ORTHO05D000153 4.9e-06 53.9 43 65.1
HPP92_021743 Vanilla planifolia HOM05D000258 ORTHO05D000153 4.9e-06 53.9 38 60.5
HPP92_021747 Vanilla planifolia HOM05D000258 ORTHO05D000153 4.9e-06 53.9 38 60.5
arahy.Tifrunner.gnm1.ann1.WDK2BM Arachis hypogaea HOM05D000258 ORTHO05D000153 6.4e-06 53.5 32 65.6
CSS0013910 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 6.4e-06 53.5 33 69.7
CANSAT01G2943 Cannabis sativa HOM05D000258 ORTHO05D000153 6.4e-06 53.5 32 75.0
CAN.G1829.6 Capsicum annuum HOM05D000258 ORTHO05D000153 6.4e-06 53.5 32 75.0
Ca_25215_v3 Cicer arietinum L. HOM05D000258 ORTHO05D000153 6.4e-06 53.5 32 68.8
Ca_25216_v3 Cicer arietinum L. HOM05D000258 ORTHO05D000153 6.4e-06 53.5 32 71.9
Haze_03909 Corylus avellana HOM05D000258 ORTHO05D000153 6.4e-06 53.5 36 63.9
ECA238G4328 Erigeron canadensis HOM05D000258 ORTHO05D000153 6.4e-06 53.5 32 75.0
Glyma.01G021000 Glycine max HOM05D000258 ORTHO05D000153 6.4e-06 53.5 32 71.9
Glyma.16G096300 Glycine max HOM05D000258 ORTHO05D000153 6.4e-06 53.5 32 71.9
HanXRQChr14g0444451 Helianthus annuus HOM05D000258 ORTHO05D000153 6.4e-06 53.5 32 75.0
Lalb_Chr16g0381551 Lupinus albus HOM05D000258 ORTHO05D000153 6.4e-06 53.5 32 68.8
Phvul.002G144800 Phaseolus vulgaris HOM05D000258 ORTHO05D000153 6.4e-06 53.5 43 55.8
PGSC0003DMG400009637 Solanum tuberosum HOM05D000258 ORTHO05D000153 6.4e-06 53.5 43 62.8
TPR.G1360 Trifolium pratense HOM05D000258 ORTHO05D000153 6.4e-06 53.5 51 52.9
VMungo1215G2952 Vigna mungo HOM05D000258 ORTHO05D000153 6.4e-06 53.5 32 71.9
Atru.chr3.1184 Acer truncatum HOM05D000258 ORTHO05D000153 8.4e-06 53.1 32 71.9
CAN.G1829.5 Capsicum annuum HOM05D000258 ORTHO05D000153 8.4e-06 53.1 32 71.9
ECA238G0926 Erigeron canadensis HOM05D000258 ORTHO05D000153 8.4e-06 53.1 32 75.0
ECA238G1663 Erigeron canadensis HOM05D000258 ORTHO05D000153 8.4e-06 53.1 32 71.9
HanXRQChr14g0444401 Helianthus annuus HOM05D000258 ORTHO05D000153 8.4e-06 53.1 43 58.1
Lsat_1_v5_gn_2_69560 Lactuca sativa HOM05D000258 ORTHO05D000153 8.4e-06 53.1 43 55.8
Lj4A266G28 Lonicera japonica HOM05D000258 ORTHO05D000153 8.4e-06 53.1 32 71.9
Lju188C12T6 Lonicera japonica HOM05D000258 ORTHO05D000153 8.4e-06 53.1 32 71.9
Manes.13G102300 Manihot esculenta HOM05D000258 ORTHO05D000153 8.4e-06 53.1 32 71.9
Medtr5g031250 Medicago truncatula HOM05D000258 ORTHO05D000153 8.4e-06 53.1 32 68.8
TPR.G27178 Trifolium pratense HOM05D000258 ORTHO05D000153 8.4e-06 53.1 51 52.9
TPR.G28816 Trifolium pratense HOM05D000258 ORTHO05D000153 8.4e-06 53.1 32 68.8


User provided reference genes

Program Settings