Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 1.5e-138 496.1 248 100.0
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 3.1e-91 339.0 196 85.2
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 1.7e-89 333.2 175 94.3
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 1.4e-51 207.2 246 47.6
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 7.8e-50 201.4 198 59.1
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 2.8e-47 193.0 244 45.1
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 1.2e-45 187.6 238 46.6
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 7.6e-45 184.9 233 47.2
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 1.0e-41 174.5 232 42.7
Nitab4.5_0000146g0080 Nicotiana tabacum HOM05D007857 ORTHO05D009355 1.0e-41 174.5 182 57.1
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 8.1e-39 164.9 256 40.2
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 1.1e-38 164.5 240 42.1
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 1.4e-38 164.1 271 39.1
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 2.4e-38 163.3 245 39.6
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 2.4e-38 163.3 237 41.4
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 4.9e-36 155.6 246 39.8
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 6.4e-36 155.2 247 36.0
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 1.9e-35 153.7 236 38.6
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 1.9e-35 153.7 238 39.1
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 3.2e-35 152.9 149 49.0
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 4.2e-35 152.5 240 39.2
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 7.1e-35 151.8 183 44.8
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 3.5e-34 149.4 182 42.9
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 6.0e-34 148.7 160 45.6
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 7.9e-34 148.3 188 41.0
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 1.0e-33 147.9 160 46.2
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 1.0e-33 147.9 237 36.3
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 1.3e-33 147.5 174 44.8
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.3e-33 147.5 238 38.7
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.3e-33 147.5 238 38.7
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 2.3e-33 146.7 160 45.6
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 4.3e-32 142.5 214 41.1
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 5.6e-32 142.1 156 46.2
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 9.6e-32 141.4 153 47.7
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 9.6e-32 141.4 133 50.4
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 9.6e-32 141.4 240 37.1
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 1.6e-31 140.6 197 39.1
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 3.7e-31 139.4 153 47.7
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 4.8e-31 139.0 253 36.0
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 1.1e-30 137.9 247 34.0
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 1.8e-30 137.1 239 36.8
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 5.3e-30 135.6 189 41.3
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 6.9e-30 135.2 211 37.9
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 9.0e-30 134.8 155 43.2
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 1.5e-29 134.0 169 42.6
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 2.6e-29 133.3 159 45.9
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 3.4e-29 132.9 158 44.9
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 3.4e-29 132.9 242 38.0
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 7.6e-29 131.7 255 38.0
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 1.0e-28 131.3 154 46.1
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 1.0e-28 131.3 253 34.0
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 1.7e-28 130.6 239 36.0
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 2.2e-28 130.2 156 48.1
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 4.9e-28 129.0 194 41.2
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 1.9e-27 127.1 255 36.5
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 2.5e-27 126.7 253 33.2
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 3.2e-27 126.3 195 37.4
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 4.2e-27 125.9 256 34.8
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 5.5e-27 125.6 254 37.8
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 1.2e-26 124.4 173 39.3
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.6e-26 124.0 256 35.2
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 1.6e-26 124.0 131 46.6
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 2.1e-26 123.6 195 39.0
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 1.0e-25 121.3 258 32.2
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 5.7e-24 115.5 163 40.5
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.6e-23 114.0 163 40.5
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.6e-23 114.0 163 40.5
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 2.8e-23 113.2 190 35.3
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 1.5e-21 107.5 186 36.0
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 1.3e-20 104.4 181 38.7
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 6.5e-20 102.1 197 35.5
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 1.9e-19 100.5 157 34.4
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 2.5e-19 100.1 153 39.2
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 5.5e-19 99.0 210 31.0
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 1.2e-18 97.8 182 34.6
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 1.8e-17 94.0 213 31.5
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 2.3e-17 93.6 247 31.6
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 3.9e-17 92.8 157 31.8
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 5.7e-16 89.0 154 34.4
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 5.7e-16 89.0 154 34.4
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 7.4e-16 88.6 154 33.8
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 1.3e-15 87.8 196 29.1
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 1.3e-15 87.8 154 33.8
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 1.7e-15 87.4 154 32.5
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 6.3e-15 85.5 154 32.5
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 2.4e-14 83.6 153 33.3
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 2.4e-14 83.6 126 34.9
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 5.3e-14 82.4 191 29.3
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 1.5e-13 80.9 214 26.2
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 2.0e-13 80.5 214 27.1
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 4.5e-13 79.3 214 26.6
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 7.7e-13 78.6 214 27.1
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 4.2e-11 72.8 147 35.4
Lj6E824T1 Lonicera japonica HOM05D007857 ORTHO05D009355 1.6e-10 70.9 41 63.4
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 6.1e-10 68.9 116 36.2
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 1.5e-08 64.3 65 52.3
ATR0686G174 Amborella trichopoda HOM05D007857 ORTHO05D009355 9.7e-08 61.6 99 35.4
ECA233G3449 Erigeron canadensis HOM05D007857 ORTHO05D009355 3.1e-06 56.6 73 41.1


User provided reference genes

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