Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g040000.2 Solanum lycopersicum HOM05D008360 ORTHO05D010532 5.7e-45 183.7 84 100.0
CAN.G1237.40 Capsicum annuum HOM05D008360 ORTHO05D010532 8.6e-17 90.1 46 89.1
Hma1.2p1_1048F.1_g251690 Hydrangea macrophylla HOM05D008360 ORTHO05D010532 2.8e-15 85.1 46 78.3
Dinv34381 Davidia involucrata HOM05D008360 ORTHO05D010532 3.6e-15 84.7 46 80.4
Nitab4.5_0002162g0190 Nicotiana tabacum HOM05D008360 ORTHO05D010532 3.6e-15 84.7 44 84.1
Duzib093G1186 Durio zibethinus HOM05D008360 ORTHO05D010532 8.1e-15 83.6 46 80.4
ECA248G1201 Erigeron canadensis HOM05D001008 ORTHO05D009098 2.4e-14 82.0 45 73.3
CSS0042665 Camellia sinensis var. sinensis HOM05D008360 ORTHO05D010532 4.0e-14 81.3 56 64.3
CiPaw.09G045700 Carya illinoinensis HOM05D008360 ORTHO05D010532 5.2e-14 80.9 46 73.9
Duzib106G1984 Durio zibethinus HOM05D008360 ORTHO05D010532 5.2e-14 80.9 46 78.3
Manes.09G007500 Manihot esculenta HOM05D008360 ORTHO05D010532 5.2e-14 80.9 46 73.9
Hund24629 Selenicereus undatus HOM05D008360 ORTHO05D010532 1.2e-13 79.7 48 68.8
Thecc.05G140600 Theobroma cacao HOM05D008360 ORTHO05D010532 2.0e-13 79.0 46 76.1
AUR62031993 Chenopodium quinoa HOM05D000009 ORTHO05D000008 2.6e-13 78.6 46 71.7
unitig_8.g3490 Utricularia gibba HOM05D008360 ORTHO05D010532 2.6e-13 78.6 46 69.6
Cc06_g18840 Coffea canephora HOM05D008360 ORTHO05D010532 3.4e-13 78.2 46 67.4
RcHm_v2.0_Chr3g0476991 Rosa chinensis HOM05D008360 ORTHO05D010532 3.4e-13 78.2 84 45.2
arahy.Tifrunner.gnm1.ann1.LHUB84 Arachis hypogaea HOM05D008360 ORTHO05D010532 4.4e-13 77.8 73 52.1
RcHm_v2.0_Chr3g0476891 Rosa chinensis HOM05D008360 ORTHO05D010532 5.8e-13 77.4 46 69.6
FAN09G2365 Fragaria x ananassa HOM05D008360 ORTHO05D010532 7.6e-13 77.0 53 62.3
Potri.016G038300 Populus trichocarpa HOM05D008360 ORTHO05D010532 7.6e-13 77.0 46 71.7
Prupe.7G043000 Prunus persica HOM05D008360 ORTHO05D010532 7.6e-13 77.0 46 69.6
FAN14G5043 Fragaria x ananassa HOM05D008360 ORTHO05D010532 2.2e-12 75.5 53 60.4
COL.COLO4_37957 Corchorus olitorius HOM05D008360 ORTHO05D010532 6.4e-12 73.9 46 73.9
Migut.K00128 Erythranthe guttata HOM05D008360 ORTHO05D010532 6.4e-12 73.9 45 68.9
Manes.08G057500 Manihot esculenta HOM05D008360 ORTHO05D010532 1.1e-11 73.2 46 67.4
Potri.006G041600 Populus trichocarpa HOM05D008360 ORTHO05D010532 4.1e-11 71.2 46 67.4
Gohir.A09G118500 Gossypium hirsutum HOM05D008360 ORTHO05D010532 7.1e-11 70.5 46 71.7
Gohir.D09G115400 Gossypium hirsutum HOM05D008360 ORTHO05D010532 7.1e-11 70.5 46 71.7
Gorai.006G133100 Gossypium raimondii HOM05D008360 ORTHO05D010532 7.1e-11 70.5 46 71.7
Lj1g0003695 Lotus japonicus HOM05D008360 ORTHO05D010532 7.1e-11 70.5 46 65.2
Migut.J01675 Erythranthe guttata HOM05D008360 ORTHO05D010532 9.2e-11 70.1 45 64.4
Phvul.001G125600 Phaseolus vulgaris HOM05D008360 ORTHO05D010532 1.2e-10 69.7 46 65.2
Medtr7g090260 Medicago truncatula HOM05D008360 ORTHO05D010532 4.6e-10 67.8 46 65.2
Sabra06G0028300 Salix brachista HOM05D008360 ORTHO05D010532 6.0e-10 67.4 66 50.0
Aa31LG10G11990 Aethionema arabicum HOM05D008360 ORTHO05D010532 1.0e-09 66.6 46 63.0
Actinidia17687 Actinidia chinensis HOM05D008360 ORTHO05D010532 5.1e-09 64.3 39 66.7
CARHR167260 Cardamine hirsuta HOM05D008360 ORTHO05D010532 5.1e-09 64.3 46 58.7
THA.LOC104824413 Tarenaya hassleriana HOM05D008360 ORTHO05D010532 6.6e-09 63.9 46 58.7
Carub.0005s2387 Capsella rubella HOM05D008360 ORTHO05D010532 8.7e-09 63.5 46 56.5
Hma1.2p1_1048F.1_g251680 Hydrangea macrophylla HOM05D008360 ORTHO05D010532 8.7e-09 63.5 46 65.2
A09p49990 Brassica napus HOM05D008360 ORTHO05D010532 1.1e-08 63.2 46 58.7
C08p32400 Brassica napus HOM05D008360 ORTHO05D010532 1.1e-08 63.2 46 58.7
BolC8t50854H Brassica oleracea HOM05D008360 ORTHO05D010532 1.1e-08 63.2 46 58.7
BraA09t40449Z Brassica rapa HOM05D008360 ORTHO05D010532 1.1e-08 63.2 46 58.7
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 1.1e-08 63.2 36 66.7
AL5G38550 Arabidopsis lyrata HOM05D008360 ORTHO05D010532 1.5e-08 62.8 46 56.5
AT3G57062 Arabidopsis thaliana HOM05D008360 ORTHO05D010532 1.5e-08 62.8 46 56.5
Thhalv10006358m.g Eutrema salsugineum HOM05D008360 ORTHO05D010532 1.9e-08 62.4 46 56.5
Lalb_Chr25g0286871 Lupinus albus HOM05D008360 ORTHO05D010532 5.6e-08 60.8 46 58.7
BcaC02g12894 Brassica carinata HOM05D008360 ORTHO05D010532 3.6e-07 58.2 46 56.5
PSO384G3670 Papaver somniferum HOM05D008360 ORTHO05D010532 3.6e-07 58.2 46 50.0
Lalb_Chr20g0110161 Lupinus albus HOM05D008360 ORTHO05D010532 8.1e-07 57.0 47 59.6
AL4G39310 Arabidopsis lyrata HOM05D008360 ORTHO05D010532 1.8e-06 55.8 46 50.0


User provided reference genes

Program Settings