Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 2.1e-88 328.9 161 100.0
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 6.0e-83 310.8 154 98.7
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 6.0e-83 310.8 154 98.7
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 6.0e-83 310.8 154 98.7
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 1.2e-80 303.1 155 97.4
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 9.2e-76 287.0 154 92.2
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.2e-67 260.0 167 78.4
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 8.1e-64 247.3 161 78.3
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.1e-57 226.9 149 75.8
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.8e-32 141.7 118 56.8
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 4.5e-30 135.2 72 95.8
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.5e-28 128.3 160 46.9
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-27 127.1 111 55.9
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.6e-27 125.2 123 50.4
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.0e-26 124.0 159 44.0
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.7e-26 121.3 161 45.3
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 1.5e-25 120.2 66 95.5
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.3e-25 119.0 134 47.8
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.3e-25 119.0 84 65.5
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.3e-25 118.6 133 48.9
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.7e-25 118.2 131 45.8
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.7e-25 117.5 134 47.8
Sopen03g014420 Solanum pennellii HOM05D004064 ORTHO05D011910 1.3e-24 117.1 79 75.9
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-23 114.0 112 49.1
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.8e-23 113.2 167 41.3
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.1e-23 110.9 174 37.4
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 2.6e-22 109.4 131 44.3
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.6e-22 109.4 167 39.5
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.5e-22 108.6 84 61.9
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 4.5e-22 108.6 61 91.8
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.3e-21 107.1 132 46.2
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 6.5e-21 104.8 99 51.5
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 1.4e-20 103.6 121 43.0
Nitab4.5_0001907g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.5e-20 102.8 149 41.6
Nitab4.5_0004504g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.2e-20 102.4 78 59.0
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 7.2e-20 101.3 128 41.4
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 1.2e-19 100.5 121 41.3
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 4.7e-19 98.6 130 42.3
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 4.7e-19 98.6 63 85.7
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 2.3e-18 96.3 99 47.5
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-17 92.8 95 44.2
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 4.4e-17 92.0 155 34.8
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 7.4e-17 91.3 155 34.8
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.7e-17 90.9 88 58.0
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 9.7e-17 90.9 155 34.8
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 1.3e-16 90.5 161 34.2
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 2.2e-16 89.7 96 44.8
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.7e-16 89.0 162 32.1
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 4.8e-16 88.6 161 33.5
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 1.8e-15 86.7 145 35.2
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.4e-15 86.3 101 41.6
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 6.9e-15 84.7 156 33.3
CAN.G278.18 Capsicum annuum HOM05D004064 ORTHO05D009909 7.7e-14 81.3 144 33.3
Sopen07g022410 Solanum pennellii HOM05D004064 ORTHO05D011910 1.7e-13 80.1 52 78.8
Solyc10g054675.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 2.2e-13 79.7 37 100.0
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.2e-13 79.7 151 33.8
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 8.5e-13 77.8 94 36.2
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-12 77.4 139 39.6
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 2.5e-12 76.3 52 78.8
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-11 72.8 138 31.9
Nitab4.5_0000831g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.7e-11 72.0 108 41.7
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.1e-11 71.6 102 42.2
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.8e-10 70.1 101 39.6
PGSC0003DMG400047205 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.3e-10 69.7 99 38.4
PGSC0003DMG400007543 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.0e-10 69.3 96 38.5
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 6.7e-10 68.2 101 31.7
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 8.8e-10 67.8 83 38.6
CAN.G1724.2 Capsicum annuum HOM05D002537 ORTHO05D002751 1.5e-09 67.0 73 46.6
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-09 66.2 144 29.9
Sopen03g019250 Solanum pennellii HOM05D000528 ORTHO05D001569 9.7e-09 64.3 55 63.6
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.8e-08 62.8 65 58.5
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 3.7e-08 62.4 32 87.5
PGSC0003DMG400004105 Solanum tuberosum HOM05D000017 ORTHO05D009909 8.2e-08 61.2 128 32.0
Sopen01g007650 Solanum pennellii HOM05D010431 ORTHO05D009909 1.1e-07 60.8 80 42.5
Solyc03g070470.1 Solanum lycopersicum HOM05D000528 ORTHO05D001569 1.4e-07 60.5 55 60.0
Nitab4.5_0011075g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.8e-07 60.1 96 36.5
Sopen03g016280 Solanum pennellii HOM05D004064 ORTHO05D009909 1.8e-07 60.1 94 29.8
PGSC0003DMG400045567 Solanum tuberosum HOM05D004064 ORTHO05D037746 1.8e-07 60.1 113 31.9
Nitab4.5_0001070g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.1e-07 59.3 96 35.4
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 4.1e-07 58.9 126 31.0
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 4.1e-07 58.9 48 54.2
CAN.G946.2 Capsicum annuum HOM05D000017 ORTHO05D001349 9.1e-07 57.8 94 31.9
Nitab4.5_0004469g0110 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-06 57.4 96 34.4
Nitab4.5_0005160g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-06 57.4 96 34.4
Sopen11g025620 Solanum pennellii HOM05D000017 ORTHO05D001349 1.2e-06 57.4 92 33.7
PGSC0003DMG400039421 Solanum tuberosum HOM05D005093 ORTHO05D009561 1.2e-06 57.4 50 48.0
Nitab4.5_0000686g0200 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-06 57.0 95 35.8
Nitab4.5_0001107g0130 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-06 57.0 93 36.6
Nitab4.5_0002604g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-06 57.0 96 35.4
Peaxi162Scf00062g00106 Petunia axillaris HOM05D006921 ORTHO05D009185 1.6e-06 57.0 123 31.7
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 1.6e-06 57.0 123 30.9
RhsimUnG0197100 Rhododendron simsii HOM05D017760 ORTHO05D004107 1.6e-06 57.0 100 35.0
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-06 57.0 92 33.7
Ah.10g025880 Amaranthus hybridus HOM05D009581 ORTHO05D004107 2.0e-06 56.6 137 25.5
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 2.0e-06 56.6 94 31.9
Nitab4.5_0000127g0130 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.0e-06 56.6 96 34.4
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 2.0e-06 56.6 92 32.6
Nitab4.5_0000520g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.6e-06 56.2 97 34.0
Nitab4.5_0001427g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.6e-06 56.2 100 35.0
Dinv17061 Davidia involucrata HOM05D001632 ORTHO05D001534 3.5e-06 55.8 104 34.6
Dinv43005 Davidia involucrata HOM05D001632 ORTHO05D001534 3.5e-06 55.8 104 34.6
Dinv43092 Davidia involucrata HOM05D001632 ORTHO05D001534 3.5e-06 55.8 104 34.6
Nitab4.5_0002789g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.5e-06 55.8 96 34.4
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 92 32.6
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 92 32.6
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 92 32.6
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 3.5e-06 55.8 92 32.6
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 92 32.6
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 92 32.6
Dinv09483 Davidia involucrata HOM05D012890 ORTHO05D004107 4.5e-06 55.5 104 33.7
Nitab4.5_0002210g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.9e-06 55.1 96 34.4
Nitab4.5_0002437g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.9e-06 55.1 97 34.0
RhsimUnG0221800 Rhododendron simsii HOM05D017760 ORTHO05D004107 5.9e-06 55.1 100 34.0
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-06 55.1 92 32.6
Nitab4.5_0001333g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.7e-06 54.7 94 36.2
Nitab4.5_0002710g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.7e-06 54.7 97 34.0
Nitab4.5_0004968g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.7e-06 54.7 96 33.3
Rhsim02G0144400 Rhododendron simsii HOM05D017760 ORTHO05D004107 7.7e-06 54.7 102 32.4


User provided reference genes

Program Settings