Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 6.2e-64 247.3 124 100.0
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 1.8e-63 245.7 124 99.2
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 1.2e-51 206.5 103 99.0
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 2.7e-51 205.3 132 81.1
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.5e-41 172.9 113 77.0
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 2.0e-41 172.6 113 77.0
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 1.2e-38 163.3 130 66.2
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 2.7e-22 109.0 121 48.8
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 2.7e-22 109.0 121 48.8
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 7.7e-22 107.5 92 58.7
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 7.7e-22 107.5 119 48.7
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 1.7e-21 106.3 125 48.8
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 2.2e-21 105.9 96 57.3
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 2.2e-21 105.9 94 56.4
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 2.9e-21 105.5 104 53.8
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 2.9e-21 105.5 94 56.4
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 3.8e-21 105.1 141 44.7
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.8e-21 105.1 124 48.4
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 3.8e-21 105.1 99 55.6
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 3.8e-21 105.1 91 57.1
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 6.5e-21 104.4 103 54.4
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 8.5e-21 104.0 67 71.6
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 8.5e-21 104.0 100 53.0
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 8.5e-21 104.0 72 68.1
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 8.5e-21 104.0 94 56.4
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 1.1e-20 103.6 124 46.8
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 2.5e-20 102.4 67 71.6
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 3.2e-20 102.1 65 72.3
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 3.2e-20 102.1 100 55.0
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 5.5e-20 101.3 83 62.7
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 9.4e-20 100.5 82 62.2
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 1.2e-19 100.1 122 45.1
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 1.2e-19 100.1 82 62.2
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.2e-19 100.1 82 62.2
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.2e-19 100.1 82 62.2
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.2e-19 100.1 87 60.9
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.2e-19 100.1 77 61.0
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.6e-19 99.8 104 51.9
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 1.6e-19 99.8 94 54.3
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 2.1e-19 99.4 77 61.0
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 2.7e-19 99.0 119 43.7
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 2.7e-19 99.0 119 43.7
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 3.6e-19 98.6 91 51.6
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 4.7e-19 98.2 140 42.1
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 6.1e-19 97.8 68 66.2
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 8.0e-19 97.4 121 48.8
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 8.0e-19 97.4 120 46.7
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 8.0e-19 97.4 72 62.5
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 8.0e-19 97.4 72 62.5
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.0e-18 97.1 116 44.8
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 1.0e-18 97.1 97 52.6
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 1.0e-18 97.1 85 57.6
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 1.0e-18 97.1 92 53.3
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 1.0e-18 97.1 65 67.7
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 1.0e-18 97.1 92 53.3
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.4e-18 96.7 83 60.2
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 1.4e-18 96.7 82 57.3
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.8e-18 96.3 82 58.5
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 1.8e-18 96.3 83 59.0
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 2.3e-18 95.9 122 46.7
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 3.0e-18 95.5 119 43.7
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 3.0e-18 95.5 119 43.7
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 3.0e-18 95.5 77 61.0
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 5.2e-18 94.7 121 45.5
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 5.2e-18 94.7 144 36.8
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 5.2e-18 94.7 69 62.3
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 6.8e-18 94.4 102 51.0
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 6.8e-18 94.4 116 45.7
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 8.8e-18 94.0 91 49.5
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 8.8e-18 94.0 125 40.8
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 8.8e-18 94.0 95 51.6
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 1.2e-17 93.6 114 48.2
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 1.2e-17 93.6 87 51.7
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 1.2e-17 93.6 87 52.9
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.5e-17 93.2 72 58.3
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 1.5e-17 93.2 76 60.5
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 2.0e-17 92.8 88 54.5
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 3.4e-17 92.0 90 51.1
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 4.4e-17 91.7 123 45.5
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 4.4e-17 91.7 68 63.2
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 7.5e-17 90.9 91 48.4
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 7.5e-17 90.9 74 62.2
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 9.8e-17 90.5 92 51.1
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 1.7e-16 89.7 67 61.2
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 1.7e-16 89.7 69 59.4
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 2.2e-16 89.4 117 43.6
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 2.8e-16 89.0 129 42.6
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 4.8e-16 88.2 126 42.1
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 6.3e-16 87.8 83 53.0
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 8.3e-16 87.4 76 53.9
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 1.1e-15 87.0 69 59.4
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 3.1e-15 85.5 70 55.7
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 5.4e-15 84.7 103 43.7
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 7.0e-15 84.3 62 62.9
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 9.1e-15 84.0 61 62.3
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 9.1e-15 84.0 97 48.5
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 9.1e-15 84.0 72 55.6
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 1.6e-14 83.2 113 41.6
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 5.9e-14 81.3 91 48.4
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.9e-13 79.0 66 56.1
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.9e-13 79.0 66 56.1
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 8.5e-13 77.4 87 49.4
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 2.5e-12 75.9 73 53.4
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 2.1e-11 72.8 61 54.1
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 2.3e-10 69.3 80 46.2
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 5.2e-10 68.2 65 56.9
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 5.7e-09 64.7 72 48.6


User provided reference genes

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