Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 1.9e-116 422.9 290 100.0
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 5.1e-101 371.7 291 88.7
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 4.6e-94 348.6 337 76.6
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 7.3e-55 218.4 291 59.1
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 3.1e-29 133.3 183 53.0
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 5.8e-28 129.0 171 50.3
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 5.8e-28 129.0 176 50.6
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 3.0e-24 116.7 177 49.2
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 9.6e-23 111.7 151 56.3
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 8.1e-22 108.6 174 43.1
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 1.1e-21 108.2 145 47.6
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 1.4e-21 107.8 174 43.1
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 1.4e-21 107.8 174 43.1
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 1.4e-21 107.8 289 36.0
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 6.9e-21 105.5 151 45.7
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 1.2e-20 104.8 174 42.0
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 1.2e-20 104.8 65 78.5
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 1.5e-20 104.4 147 49.7
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 2.6e-20 103.6 141 45.4
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 2.6e-20 103.6 184 44.6
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 3.4e-20 103.2 170 40.6
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 5.8e-20 102.4 186 42.5
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 5.8e-20 102.4 181 45.9
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 5.8e-20 102.4 177 40.7
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 1.3e-19 101.3 168 43.5
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 1.7e-19 100.9 61 78.7
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 1.7e-19 100.9 61 78.7
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 2.2e-19 100.5 149 53.7
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 3.8e-19 99.8 301 32.2
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 3.8e-19 99.8 201 40.8
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 8.4e-19 98.6 151 49.7
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 1.1e-18 98.2 72 69.4
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.4e-18 97.8 72 66.7
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.4e-18 97.8 111 49.5
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 5.4e-18 95.9 170 38.2
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 5.4e-18 95.9 174 37.9
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 1.2e-17 94.7 169 37.9
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 1.6e-17 94.4 191 37.7
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 2.1e-17 94.0 158 41.1
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 6.0e-17 92.4 287 36.6
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 6.0e-17 92.4 144 43.1
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 7.8e-17 92.0 182 41.2
Peaxi162Scf00354g00210 Petunia axillaris HOM05D015445 ORTHO05D008750 7.8e-17 92.0 132 53.8
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 7.8e-17 92.0 153 47.1
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 1.3e-16 91.3 90 56.7
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 1.7e-16 90.9 276 35.5
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 8.7e-16 88.6 179 40.2
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.9e-15 87.4 68 63.2
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 2.5e-15 87.0 156 39.7
Nitab4.5_0004587g0040 Nicotiana tabacum HOM05D015445 ORTHO05D025892 2.5e-15 87.0 264 37.1
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 2.5e-15 87.0 70 64.3
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 3.3e-15 86.7 65 66.2
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 4.3e-15 86.3 176 39.2
Nitab4.5_0001509g0010 Nicotiana tabacum HOM05D015445 ORTHO05D025892 7.3e-15 85.5 264 35.2
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 7.3e-15 85.5 145 42.1
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 2.1e-14 84.0 62 69.4
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 2.8e-14 83.6 65 66.2
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 3.6e-14 83.2 172 37.8
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 3.6e-14 83.2 65 63.1
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 3.6e-14 83.2 174 40.2
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 4.8e-14 82.8 62 67.7
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 6.2e-14 82.4 65 67.7
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 1.4e-13 81.3 304 31.9
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 1.8e-13 80.9 152 40.1
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 2.4e-13 80.5 152 38.8
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 2.4e-13 80.5 151 41.1
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 3.1e-13 80.1 88 51.1
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 5.3e-13 79.3 81 54.3
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 6.9e-13 79.0 141 42.6
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 1.5e-12 77.8 151 42.4
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 2.0e-12 77.4 175 35.4
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 7.6e-12 75.5 148 40.5
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 7.6e-12 75.5 154 46.1
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 7.6e-12 75.5 63 58.7
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 2.9e-11 73.6 305 30.5
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 4.9e-11 72.8 121 46.3
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 4.2e-10 69.7 167 37.7
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.2e-09 68.2 112 40.2
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.2e-09 68.2 112 40.2
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 1.6e-09 67.8 65 52.3
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 1.6e-09 67.8 65 52.3
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 7.9e-09 65.5 65 49.2
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 7.9e-09 65.5 145 42.1
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 7.9e-09 65.5 78 44.9
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 1.0e-08 65.1 65 47.7
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 1.0e-08 65.1 65 47.7
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.3e-08 64.7 58 53.4
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 3.0e-08 63.5 119 44.5
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 8.7e-08 62.0 141 41.1
Lalb_Chr21g0316471 Lupinus albus HOM05D007490 ORTHO05D008750 1.1e-07 61.6 87 42.5
PSO675G6051 Papaver somniferum HOM05D008994 ORTHO05D010954 7.4e-07 58.9 48 66.7
Os07g0656300 Oryza sativa ssp. japonica HOM05D022794 ORTHO05D023027 9.6e-07 58.5 63 52.4
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 2.1e-06 57.4 297 34.0
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 2.1e-06 57.4 282 30.1
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 4.8e-06 56.2 146 34.9


User provided reference genes

Program Settings