Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g015330.3 Solanum lycopersicum HOM05D007436 ORTHO05D009398 6.5e-129 464.2 247 100.0
Sopen04g007390 Solanum pennellii HOM05D007436 ORTHO05D009398 6.1e-127 457.6 247 97.6
PGSC0003DMG400027262 Solanum tuberosum HOM05D007436 ORTHO05D009398 1.1e-123 446.8 247 96.4
CAN.G1905.6 Capsicum annuum HOM05D007436 ORTHO05D009398 5.7e-109 397.9 247 85.4
Nitab4.5_0000147g0110 Nicotiana tabacum HOM05D007436 ORTHO05D009398 3.6e-95 352.1 250 77.2
Nitab4.5_0001663g0200 Nicotiana tabacum HOM05D007436 ORTHO05D009398 3.4e-93 345.5 250 76.4
Rhsim13G0138000 Rhododendron simsii HOM05D007436 ORTHO05D009398 3.8e-81 305.4 207 75.8
MSTRG.14579 Avicennia marina HOM05D007436 ORTHO05D009398 1.2e-79 300.4 179 80.4
Dinv04377 Davidia involucrata HOM05D007436 ORTHO05D009398 2.8e-79 299.3 200 75.0
Migut.H01642 Erythranthe guttata HOM05D007436 ORTHO05D009398 1.0e-78 297.4 201 75.6
Haze_07065 Corylus avellana HOM05D007436 ORTHO05D009398 1.4e-78 297.0 237 65.8
Potri.016G000900 Populus trichocarpa HOM05D007436 ORTHO05D009398 1.2e-77 293.9 175 81.1
Hma1.2p1_0394F.1_g143390 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 1.5e-77 293.5 177 79.7
Cc09_g00050 Coffea canephora HOM05D007436 ORTHO05D009398 1.3e-76 290.4 209 69.9
RcHm_v2.0_Chr5g0000011 Rosa chinensis HOM05D007436 ORTHO05D009398 1.7e-76 290.0 205 71.7
HanXRQChr05g0129051 Helianthus annuus HOM05D007436 ORTHO05D009398 2.9e-76 289.3 176 79.0
vmacro03584 Vaccinium macrocarpon HOM05D007436 ORTHO05D009398 2.9e-76 289.3 235 68.5
Actinidia01458 Actinidia chinensis HOM05D007436 ORTHO05D009398 3.7e-76 288.9 178 78.1
Aqoxy5G00546 Aquilegia oxysepala HOM05D007436 ORTHO05D009398 3.7e-76 288.9 174 79.3
Ciclev10016151m.g Citrus clementina HOM05D007436 ORTHO05D009398 3.7e-76 288.9 204 72.5
PGR004G2900 Punica granatum HOM05D007436 ORTHO05D009398 4.9e-76 288.5 208 68.8
QL05p066185 Quercus lobata HOM05D007436 ORTHO05D009398 6.3e-76 288.1 229 63.8
Prupe.4G000400 Prunus persica HOM05D007436 ORTHO05D009398 8.3e-76 287.7 176 77.3
FvH4_3g00011 Fragaria vesca HOM05D007436 ORTHO05D009398 1.4e-75 287.0 205 68.8
Glyma.15G123400 Glycine max HOM05D007436 ORTHO05D009398 1.4e-75 287.0 173 77.5
Glyma.09G017600 Glycine max HOM05D007436 ORTHO05D009398 3.2e-75 285.8 173 76.9
ECA247G4131 Erigeron canadensis HOM05D007436 ORTHO05D009398 4.1e-75 285.4 178 77.5
Peaxi162Scf00563g00525 Petunia axillaris HOM05D007436 ORTHO05D009398 4.1e-75 285.4 156 89.7
TAR627G0530 Trochodendron aralioides HOM05D007436 ORTHO05D009398 4.1e-75 285.4 173 78.0
Potri.006G000600 Populus trichocarpa HOM05D007436 ORTHO05D009398 5.4e-75 285.0 171 79.5
Phvul.006G134500 Phaseolus vulgaris HOM05D007436 ORTHO05D009398 7.0e-75 284.6 216 67.6
Lsat_1_v5_gn_7_12720 Lactuca sativa HOM05D007436 ORTHO05D009398 9.2e-75 284.3 176 76.7
VMungo0540G0488 Vigna mungo HOM05D007436 ORTHO05D009398 2.7e-74 282.7 216 67.1
Psat1g171240 Pisum sativum HOM05D007436 ORTHO05D009398 3.5e-74 282.3 178 75.3
FAN21G3717 Fragaria x ananassa HOM05D007436 ORTHO05D009398 5.9e-74 281.6 205 67.8
MBI14_g12730_MAGBIO Magnolia biondii HOM05D007436 ORTHO05D009398 5.9e-74 281.6 173 76.3
Thecc.06G244700 Theobroma cacao HOM05D007436 ORTHO05D009398 7.8e-74 281.2 173 76.9
Gohir.D05G180600 Gossypium hirsutum HOM05D007436 ORTHO05D009398 1.0e-73 280.8 174 74.7
Gorai.009G185600 Gossypium raimondii HOM05D007436 ORTHO05D009398 1.0e-73 280.8 174 74.7
MD10G1342400 Malus domestica HOM05D007436 ORTHO05D009398 2.3e-73 279.6 171 77.8
Lalb_Chr15g0088471 Lupinus albus HOM05D007436 ORTHO05D009398 8.6e-73 277.7 177 74.0
COL.COLO4_31969 Corchorus olitorius HOM05D007436 ORTHO05D009398 1.9e-72 276.6 236 59.3
CsaV3_6G047980 Cucumis sativus L. HOM05D007436 ORTHO05D009398 2.5e-72 276.2 177 73.4
DCAR_015316 Daucus carota HOM05D007436 ORTHO05D009398 2.5e-72 276.2 219 66.7
Ca_24687_v3 Cicer arietinum L. HOM05D007436 ORTHO05D009398 4.3e-72 275.4 178 74.2
Medtr2g028000 Medicago truncatula HOM05D007436 ORTHO05D009398 5.6e-72 275.0 177 74.0
TWI38G0239 Tripterygium wilfordii HOM05D007436 ORTHO05D009398 7.3e-72 274.6 201 67.2
Lj6g0025098 Lotus japonicus HOM05D007436 ORTHO05D009398 9.5e-72 274.2 175 74.3
TPR.G10477 Trifolium pratense HOM05D007436 ORTHO05D009398 1.6e-71 273.5 177 75.7
AL5G32730 Arabidopsis lyrata HOM05D007436 ORTHO05D009398 1.4e-70 270.4 179 72.1
ClCG01G021000 Citrullus lanatus HOM05D007436 ORTHO05D009398 1.8e-70 270.0 177 73.4
ATR0751G013 Amborella trichopoda HOM05D007436 ORTHO05D009398 2.3e-70 269.6 173 72.3
CDE03G0161 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 2.3e-70 269.6 201 66.2
CDE06G2435 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 3.1e-70 269.2 174 71.8
Oeu016929.1 Olea europaea HOM05D007436 ORTHO05D009398 3.1e-70 269.2 188 74.5
AT3G52155 Arabidopsis thaliana HOM05D007436 ORTHO05D009398 6.8e-70 268.1 179 70.4
Ah.02g128250 Amaranthus hybridus HOM05D007436 ORTHO05D009398 1.5e-69 266.9 181 70.2
Thhalv10010705m.g Eutrema salsugineum HOM05D007436 ORTHO05D009398 1.5e-69 266.9 179 69.8
Carub.0005s1851 Capsella rubella HOM05D007436 ORTHO05D009398 2.0e-69 266.5 179 70.9
Sp5g10120 Schrenkiella parvula HOM05D007436 ORTHO05D009398 4.4e-69 265.4 178 70.2
THA.LOC104813862 Tarenaya hassleriana HOM05D007436 ORTHO05D009398 4.4e-69 265.4 174 69.5
GSVIVG01002756001 Vitis vinifera HOM05D007436 ORTHO05D009398 9.8e-69 264.2 209 66.5
EL10Ac6g14103 Beta vulgaris HOM05D007436 ORTHO05D009398 1.7e-68 263.5 179 68.7
BcaC06g33383 Brassica carinata HOM05D007436 ORTHO05D009398 6.4e-68 261.5 179 68.2
A03p48730 Brassica napus HOM05D007436 ORTHO05D009398 6.4e-68 261.5 179 68.7
C07p46820 Brassica napus HOM05D007436 ORTHO05D009398 6.4e-68 261.5 179 68.2
BolC7t45199H Brassica oleracea HOM05D007436 ORTHO05D009398 6.4e-68 261.5 179 68.2
Nn3g16606 Nelumbo nucifera HOM05D007436 ORTHO05D009398 1.1e-67 260.8 154 80.5
CARHR161900 Cardamine hirsuta HOM05D007436 ORTHO05D009398 1.4e-67 260.4 170 72.9
Sed0017957 Sechium edule HOM05D007436 ORTHO05D009398 1.4e-67 260.4 176 69.9
Aa31LG10G7250 Aethionema arabicum HOM05D007436 ORTHO05D009398 1.9e-67 260.0 172 70.3
BraA03t13973Z Brassica rapa HOM05D007436 ORTHO05D009398 3.2e-67 259.2 179 67.6
Cpa.g.sc27.183 Carica papaya HOM05D007436 ORTHO05D009398 3.2e-67 259.2 225 59.6
Sabra06G0000900 Salix brachista HOM05D002163 ORTHO05D002386 5.4e-67 258.5 159 79.2
AUR62002774 Chenopodium quinoa HOM05D007436 ORTHO05D009398 1.6e-66 256.9 179 68.2
Sc24g0002050 Simmondsia chinensis HOM05D007436 ORTHO05D009398 2.7e-66 256.1 176 67.6
HPP92_000124 Vanilla planifolia HOM05D007436 ORTHO05D009398 4.6e-66 255.4 178 67.4
AUR62028431 Chenopodium quinoa HOM05D007436 ORTHO05D009398 7.8e-66 254.6 179 66.5
CiPaw.09G113200 Carya illinoinensis HOM05D007436 ORTHO05D009398 1.9e-64 250.0 160 77.5
Os09g0287300 Oryza sativa ssp. japonica HOM05D007436 ORTHO05D009398 1.4e-62 243.8 170 70.0
Mapoly0056s0036 Marchantia polymorpha HOM05D007436 ORTHO05D009398 4.0e-62 242.3 183 63.9
arahy.Tifrunner.gnm1.ann1.61UQ0U Arachis hypogaea HOM05D007436 ORTHO05D009398 6.8e-62 241.5 164 72.6
Zm00001eb309010 Zea mays HOM05D007436 ORTHO05D009398 3.4e-61 239.2 172 67.4
Hund25779 Selenicereus undatus HOM05D007436 ORTHO05D009398 5.8e-61 238.4 154 74.7
Pp3c4_8570 Physcomitrium patens HOM05D007436 ORTHO05D009398 2.3e-57 226.5 180 60.0
Atru.chr1.2207 Acer truncatum HOM05D002163 ORTHO05D002386 5.1e-57 225.3 157 72.0
Zm00001eb097480 Zea mays HOM05D007436 ORTHO05D009398 8.6e-57 224.6 164 67.7
AagrBONN_evm.TU.Sc2ySwM_228.5510 Anthoceros agrestis HOM05D007436 ORTHO05D009398 4.3e-56 222.2 176 61.9
SMO358G0652 Selaginella moellendorffii HOM05D007436 ORTHO05D009398 7.3e-56 221.5 170 57.6
Sabra16G0007700 Salix brachista HOM05D002163 ORTHO05D002386 3.9e-49 199.1 197 56.9
CBR_g31519 Chara braunii HOM05D007436 ORTHO05D009398 1.5e-48 197.2 175 57.7
Lj1A1250G60 Lonicera japonica HOM05D007436 ORTHO05D009398 1.8e-46 190.3 114 82.5
Hma1.2p1_0394F.1_g143400 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 9.9e-45 184.5 118 75.4
Gohir.A05G177200 Gossypium hirsutum HOM05D007436 ORTHO05D009398 5.4e-43 178.7 118 71.2
Manes.09G072800 Manihot esculenta HOM05D007436 ORTHO05D009398 9.3e-43 177.9 118 75.4
MELO3C007986.2 Cucumis melo HOM05D007436 ORTHO05D009398 8.7e-41 171.4 118 71.2
SGA_v2.0_scaffold49G18215 Striga asiatica HOM05D007436 ORTHO05D009398 1.3e-39 167.5 208 47.6
Eucgr.D00973 Eucalyptus grandis HOM05D007436 ORTHO05D009398 3.1e-38 162.9 176 48.9
SEGI_34845 Sequoiadendron giganteum HOM05D007436 ORTHO05D009398 1.8e-30 137.1 83 74.7
MCO14G290 Micromonas commoda HOM05D007436 ORTHO05D009398 3.1e-30 136.3 178 42.7
Cre10.g431850 Chlamydomonas reinhardtii HOM05D007436 ORTHO05D009398 1.1e-27 127.9 142 41.5
PRCOL_00004330 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 2.0e-21 107.1 159 39.0
PRCOL_00006376 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 1.1e-16 91.3 176 33.0
Lj1A1250G59 Lonicera japonica HOM05D007436 ORTHO05D009398 1.7e-12 77.4 39 84.6


User provided reference genes

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