Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g014960.4 Solanum lycopersicum HOM05D004848 ORTHO05D006859 1.7e-72 275.8 131 100.0
Sopen02g017950 Solanum pennellii HOM05D004848 ORTHO05D006859 2.2e-67 258.8 134 93.3
Solyc02g068790.4 Solanum lycopersicum HOM05D004848 ORTHO05D006859 3.2e-66 255.0 134 91.8
CAN.G149.35 Capsicum annuum HOM05D004848 ORTHO05D006859 6.2e-62 240.7 134 85.1
Nitab4.5_0004246g0030 Nicotiana tabacum HOM05D004848 ORTHO05D006859 3.9e-56 221.5 134 79.1
Nitab4.5_0000818g0090 Nicotiana tabacum HOM05D004848 ORTHO05D006859 8.6e-56 220.3 134 79.1
Peaxi162Scf00149g00052 Petunia axillaris HOM05D004848 ORTHO05D006859 1.8e-53 212.6 134 76.1
Dinv25911 Davidia involucrata HOM05D004848 ORTHO05D006859 2.6e-44 182.2 134 64.2
Lj1A1145G19 Lonicera japonica HOM05D004848 ORTHO05D006859 2.6e-44 182.2 134 63.4
Actinidia22396 Actinidia chinensis HOM05D004848 ORTHO05D006859 2.2e-43 179.1 134 61.9
CSS0017265 Camellia sinensis var. sinensis HOM05D004848 ORTHO05D006859 4.9e-43 177.9 134 61.2
Atru.chr10.537 Acer truncatum HOM05D004848 ORTHO05D006859 1.1e-42 176.8 134 62.7
Cc09_g06070 Coffea canephora HOM05D004848 ORTHO05D006859 1.9e-42 176.0 134 61.9
TAR371G0760 Trochodendron aralioides HOM05D004848 ORTHO05D006859 2.4e-42 175.6 134 61.2
Atru.chr10.533 Acer truncatum HOM05D004848 ORTHO05D006859 5.4e-42 174.5 134 61.9
HanXRQChr14g0447411 Helianthus annuus HOM05D004848 ORTHO05D006859 9.3e-42 173.7 134 61.9
FvH4_3g12290 Fragaria vesca HOM05D004848 ORTHO05D006859 1.6e-41 172.9 134 60.4
MD10G1232500 Malus domestica HOM05D004848 ORTHO05D006859 1.6e-41 172.9 134 61.2
Nn7g38150 Nelumbo nucifera HOM05D004848 ORTHO05D006859 2.1e-41 172.6 134 61.2
PGR042G2559 Punica granatum HOM05D004848 ORTHO05D006859 2.7e-41 172.2 134 61.2
FAN25G0040 Fragaria x ananassa HOM05D004848 ORTHO05D006859 3.5e-41 171.8 134 60.4
vmacro03521 Vaccinium macrocarpon HOM05D004848 ORTHO05D006859 3.5e-41 171.8 134 59.0
ECA238G4765 Erigeron canadensis HOM05D004848 ORTHO05D006859 4.6e-41 171.4 134 61.2
Lalb_Chr16g0385221 Lupinus albus HOM05D004848 ORTHO05D006859 4.6e-41 171.4 134 57.5
Prupe.4G112000 Prunus persica HOM05D004848 ORTHO05D006859 4.6e-41 171.4 134 59.7
Duzib160G0177 Durio zibethinus HOM05D004848 ORTHO05D006859 6.0e-41 171.0 134 59.7
FAN21G0923 Fragaria x ananassa HOM05D004848 ORTHO05D006859 6.0e-41 171.0 134 60.4
FAN16G1950 Fragaria x ananassa HOM05D004848 ORTHO05D006859 1.0e-40 170.2 134 59.7
RcHm_v2.0_Chr5g0020101 Rosa chinensis HOM05D004848 ORTHO05D006859 1.3e-40 169.9 134 59.7
Thecc.06G143000 Theobroma cacao HOM05D004848 ORTHO05D006859 1.3e-40 169.9 134 61.2
MSTRG.13293 Avicennia marina HOM05D004848 ORTHO05D006859 3.9e-40 168.3 134 59.0
QL11p016422 Quercus lobata HOM05D004848 ORTHO05D006859 3.9e-40 168.3 133 58.6
Lj4g0026898 Lotus japonicus HOM05D004848 ORTHO05D006859 6.6e-40 167.5 134 57.5
CiPaw.10G064700 Carya illinoinensis HOM05D004848 ORTHO05D006859 8.7e-40 167.2 134 59.7
Gohir.D05G148000 Gossypium hirsutum HOM05D004848 ORTHO05D006859 1.5e-39 166.4 134 58.2
Gorai.009G152200 Gossypium raimondii HOM05D004848 ORTHO05D006859 1.5e-39 166.4 134 58.2
MD05G1251700 Malus domestica HOM05D004848 ORTHO05D006859 1.5e-39 166.4 134 58.2
GSVIVG01012068001 Vitis vinifera HOM05D004848 ORTHO05D006859 1.5e-39 166.4 131 59.5
Sabra15G0138300 Salix brachista HOM05D004848 ORTHO05D006859 1.9e-39 166.0 134 59.0
TWI38G1208 Tripterygium wilfordii HOM05D004848 ORTHO05D006859 1.9e-39 166.0 134 56.7
Gohir.A05G145600 Gossypium hirsutum HOM05D004848 ORTHO05D006859 5.6e-39 164.5 134 57.5
Oeu056030.1 Olea europaea HOM05D004848 ORTHO05D006859 1.3e-38 163.3 134 56.7
ClCG01G025720 Citrullus lanatus HOM05D004848 ORTHO05D006859 1.6e-38 162.9 134 56.0
Migut.M01981 Erythranthe guttata HOM05D004848 ORTHO05D006859 1.6e-38 162.9 134 58.2
Cfa000710 Carpinus fangiana HOM05D004848 ORTHO05D006859 4.8e-38 161.4 134 57.5
SGA_v2.0_scaffold175G39362 Striga asiatica HOM05D004848 ORTHO05D006859 8.1e-38 160.6 134 56.0
MELO3C007013.2 Cucumis melo HOM05D004848 ORTHO05D006859 1.4e-37 159.8 134 55.2
Hund22216 Selenicereus undatus HOM05D004848 ORTHO05D006859 1.4e-37 159.8 134 54.5
Lsat_1_v5_gn_2_63860 Lactuca sativa HOM05D004848 ORTHO05D006859 1.8e-37 159.5 134 55.2
PSO541G1718 Papaver somniferum HOM05D004848 ORTHO05D006859 3.1e-37 158.7 134 56.0
Ciclev10014513m.g Citrus clementina HOM05D004848 ORTHO05D006859 4.0e-37 158.3 134 56.0
COL.COLO4_30993 Corchorus olitorius HOM05D004848 ORTHO05D006859 5.3e-37 157.9 140 56.4
PSO675G2729 Papaver somniferum HOM05D004848 ORTHO05D006859 5.3e-37 157.9 134 54.5
DCAR_007788 Daucus carota HOM05D004848 ORTHO05D006859 6.9e-37 157.5 134 54.5
Manes.16G057700 Manihot esculenta HOM05D004848 ORTHO05D006859 1.2e-36 156.8 134 54.5
Cpa.g.sc135.8 Carica papaya HOM05D004848 ORTHO05D006859 2.0e-36 156.0 134 51.5
CsaV3_6G052960 Cucumis sativus L. HOM05D004848 ORTHO05D006859 3.4e-36 155.2 134 53.7
CANSAT35G1894 Cannabis sativa HOM05D004848 ORTHO05D006859 5.8e-36 154.5 134 54.5
Sed0003868 Sechium edule HOM05D004848 ORTHO05D006859 9.9e-36 153.7 134 55.2
Glyma.20G020100 Glycine max HOM05D004848 ORTHO05D006859 1.3e-35 153.3 131 51.9
Nitab4.5_0001288g0250 Nicotiana tabacum HOM05D004848 ORTHO05D006859 1.3e-35 153.3 124 66.1
Psat7g130520 Pisum sativum HOM05D004848 ORTHO05D006859 1.3e-35 153.3 134 53.0
Medtr4g084060 Medicago truncatula HOM05D004848 ORTHO05D006859 2.2e-35 152.5 134 53.0
SalBow8G3445 Salvia bowleyana HOM05D004848 ORTHO05D006859 3.8e-35 151.8 134 52.2
unitig_21.g20196 Utricularia gibba HOM05D004848 ORTHO05D006859 3.8e-35 151.8 134 55.2
VMungo0251G2797 Vigna mungo HOM05D004848 ORTHO05D006859 4.9e-35 151.4 134 50.7
arahy.Tifrunner.gnm1.ann1.4Z5NYX Arachis hypogaea HOM05D004848 ORTHO05D006859 8.4e-35 150.6 134 54.5
arahy.Tifrunner.gnm1.ann1.84J3B2 Arachis hypogaea HOM05D004848 ORTHO05D006859 8.4e-35 150.6 134 53.7
Phvul.002G098100 Phaseolus vulgaris HOM05D004848 ORTHO05D006859 8.4e-35 150.6 134 50.7
SalBow6G5406 Salvia bowleyana HOM05D004848 ORTHO05D006859 8.4e-35 150.6 134 52.2
ATR0763G002 Amborella trichopoda HOM05D004848 ORTHO05D006859 2.4e-34 149.1 134 53.0
Sc12g0008200 Simmondsia chinensis HOM05D004848 ORTHO05D006859 2.4e-34 149.1 134 53.0
Ca_18763_v3 Cicer arietinum L. HOM05D004848 ORTHO05D006859 4.2e-34 148.3 134 52.2
TPR.G20986 Trifolium pratense HOM05D004848 ORTHO05D006859 9.3e-34 147.1 128 53.1
BcaC01g00643 Brassica carinata HOM05D004848 ORTHO05D006859 2.7e-33 145.6 134 52.2
A08p14580 Brassica napus HOM05D004848 ORTHO05D006859 2.7e-33 145.6 134 52.2
C03p82150 Brassica napus HOM05D004848 ORTHO05D006859 2.7e-33 145.6 134 52.2
BolC3t20538H Brassica oleracea HOM05D004848 ORTHO05D006859 2.7e-33 145.6 134 52.2
BraA08t33444Z Brassica rapa HOM05D004848 ORTHO05D006859 2.7e-33 145.6 134 52.2
CARHR226680 Cardamine hirsuta HOM05D004848 ORTHO05D006859 4.6e-33 144.8 134 50.0
Aqoxy1G01449 Aquilegia oxysepala HOM05D004848 ORTHO05D006859 7.9e-33 144.1 134 53.7
AL7G34080 Arabidopsis lyrata HOM05D004848 ORTHO05D006859 1.7e-32 142.9 134 50.7
AT4G19900 Arabidopsis thaliana HOM05D004848 ORTHO05D006859 3.0e-32 142.1 134 49.3
BcaB03g11645 Brassica carinata HOM05D004848 ORTHO05D006859 3.9e-32 141.7 134 50.0
EL10Ac5g12737 Beta vulgaris HOM05D004848 ORTHO05D006859 1.1e-31 140.2 134 50.7
Thhalv10024627m.g Eutrema salsugineum HOM05D004848 ORTHO05D006859 2.5e-31 139.0 134 50.0
THA.LOC104806215 Tarenaya hassleriana HOM05D004848 ORTHO05D006859 7.4e-31 137.5 137 50.4
AUR62022464 Chenopodium quinoa HOM05D004848 ORTHO05D006859 1.6e-30 136.3 134 48.5
Os07g0567300 Oryza sativa ssp. japonica HOM05D004848 ORTHO05D006859 2.8e-30 135.6 134 47.0
Zm00001eb324590 Zea mays HOM05D004848 ORTHO05D006859 6.2e-30 134.4 134 46.3
Carub.0007s2131 Capsella rubella HOM05D004848 ORTHO05D006859 1.4e-29 133.3 134 47.0
CDE02G3340 Ceratophyllum demersum HOM05D004848 ORTHO05D006859 2.4e-29 132.5 123 48.8
Glyma.07G221700 Glycine max HOM05D004848 ORTHO05D006859 4.0e-29 131.7 131 45.0
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 2.6e-28 129.0 123 50.4
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 1.7e-27 126.3 125 46.4
HPP92_015950 Vanilla planifolia HOM05D004848 ORTHO05D006859 2.2e-27 125.9 134 48.5
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 5.5e-26 121.3 123 48.0
MBI18_g11477_MAGBIO Magnolia biondii HOM05D004848 ORTHO05D006859 6.0e-25 117.9 134 47.8
PGSC0003DMG400025657 Solanum tuberosum HOM05D004848 ORTHO05D006859 6.0e-25 117.9 56 98.2
Pp3c24_4230 Physcomitrium patens HOM05D004848 ORTHO05D006859 1.5e-23 113.2 135 41.5
Lsat_1_v5_gn_4_63080 Lactuca sativa HOM05D004848 ORTHO05D006859 5.6e-23 111.3 108 46.3
Mapoly0045s0054 Marchantia polymorpha HOM05D004848 ORTHO05D006859 2.4e-21 105.9 141 39.7
AagrBONN_evm.TU.Sc2ySwM_344.2562 Anthoceros agrestis HOM05D004848 ORTHO05D006859 6.9e-21 104.4 134 38.8
Pp3c16_9070 Physcomitrium patens HOM05D004848 ORTHO05D001608 1.5e-20 103.2 136 37.5
Pp3c5_15800 Physcomitrium patens HOM05D004848 ORTHO05D006859 2.6e-20 102.4 136 39.7
Pp3c6_8960 Physcomitrium patens HOM05D004848 ORTHO05D006859 2.5e-18 95.9 136 36.8
Potri.015G122200 Populus trichocarpa HOM05D004848 ORTHO05D006859 5.5e-18 94.7 73 60.3
SMO169G0101 Selaginella moellendorffii HOM05D004848 ORTHO05D006859 3.0e-16 89.0 143 37.1
Duzib235G0624 Durio zibethinus HOM05D004848 ORTHO05D006859 4.3e-15 85.1 71 60.6
CBR_g19150 Chara braunii HOM05D001687 ORTHO05D001608 8.2e-14 80.9 132 31.1
AUR62024532 Chenopodium quinoa HOM05D004848 ORTHO05D006859 1.7e-11 73.2 72 50.0
Sp2g03470 Schrenkiella parvula HOM05D001687 ORTHO05D001608 4.8e-06 55.1 132 25.0


User provided reference genes

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