Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g011330.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.4e-24 113.6 51 100.0
Solyc03g150100.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 8.1e-18 92.8 48 87.5
Solyc00g500376.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.0e-17 90.5 48 85.4
Sopen00g012860 Solanum pennellii HOM05D008169 ORTHO05D013631 6.8e-17 89.7 48 85.4
Solyc10g082061.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 8.9e-17 89.4 48 83.3
Solyc03g124062.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.2e-16 89.0 48 85.4
Solyc01g150103.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.0e-16 88.2 48 81.2
Solyc10g082062.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.0e-16 88.2 48 83.3
Solyc01g004004.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 3.4e-16 87.4 47 85.1
Solyc09g009733.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 3.4e-16 87.4 47 85.1
Solyc00g500380.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.4e-16 87.0 48 81.2
Solyc03g026414.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.4e-16 87.0 48 83.3
Solyc08g069239.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 7.6e-16 86.3 48 81.2
Sopen00g011020 Solanum pennellii HOM05D008169 ORTHO05D013631 7.6e-16 86.3 48 81.2
Sopen00g012960 Solanum pennellii HOM05D008169 ORTHO05D013631 9.9e-16 85.9 48 81.2
Solyc08g069240.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.3e-15 85.5 48 79.2
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 3.8e-15 84.0 48 79.2
Solyc04g012200.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 6.4e-15 83.2 48 83.3
Solyc03g005397.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 8.4e-15 82.8 47 80.9
Solyc03g026416.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.1e-14 82.4 48 81.2
Solyc03g150130.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.4e-14 82.0 48 79.2
Solyc08g069234.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.4e-14 82.0 47 83.0
Solyc08g006257.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 5.4e-14 80.1 42 85.7
Solyc10g083067.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 5.4e-14 80.1 41 87.8
Solyc03g005395.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.1e-14 79.7 47 76.6
Solyc09g098602.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 7.1e-14 79.7 48 77.1
Solyc00g500356.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-13 79.0 48 77.1
Solyc08g069235.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.2e-13 79.0 48 77.1
Sopen00g009220 Solanum pennellii HOM05D008169 ORTHO05D013631 1.2e-13 79.0 46 80.4
Sopen00g011590 Solanum pennellii HOM05D008169 ORTHO05D013631 1.2e-13 79.0 46 78.3
Sopen00g008840 Solanum pennellii HOM05D008169 ORTHO05D013631 2.7e-13 77.8 46 76.1
Solyc09g076057.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 6.0e-13 76.6 41 82.9
Solyc07g005205.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 7.8e-13 76.3 47 74.5
Sopen00g012010 Solanum pennellii HOM05D008169 ORTHO05D013631 7.8e-13 76.3 45 77.8
Solyc00g500236.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.0e-12 75.9 39 87.2
Sopen06g020570 Solanum pennellii HOM05D005671 ORTHO05D004497 1.3e-12 75.5 44 77.3
Solyc00g500365.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.7e-12 75.1 41 82.9
Sopen00g006440 Solanum pennellii HOM05D008169 ORTHO05D013631 1.7e-12 75.1 46 76.1
Sopen03g006930 Solanum pennellii HOM05D008169 ORTHO05D000100 2.3e-12 74.7 46 71.7
Sopen00g013200 Solanum pennellii HOM05D008169 ORTHO05D013631 3.9e-12 73.9 47 76.6
Sopen07g025120 Solanum pennellii HOM05D008169 ORTHO05D013631 3.9e-12 73.9 46 73.9
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 3.9e-12 73.9 42 78.6
Solyc03g026412.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 5.1e-12 73.6 48 70.8
Sopen06g024680 Solanum pennellii HOM05D008169 ORTHO05D013631 6.6e-12 73.2 46 76.1
Sopen00g011700 Solanum pennellii HOM05D008169 ORTHO05D013631 1.1e-11 72.4 47 70.2
Solyc08g006253.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.5e-11 72.0 39 84.6
Solyc09g150102.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.9e-11 71.6 40 80.0
Solyc04g064952.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 7.3e-11 69.7 37 83.8
Solyc10g005485.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 7.3e-11 69.7 42 78.6
Solyc09g009736.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.3e-10 68.9 42 78.6
Sopen00g008990 Solanum pennellii HOM05D008169 ORTHO05D013631 1.6e-10 68.6 42 78.6
Sopen00g011790 Solanum pennellii HOM05D008169 ORTHO05D013631 4.8e-10 67.0 46 67.4
Sopen00g011670 Solanum pennellii HOM05D008169 ORTHO05D013631 8.1e-10 66.2 41 75.6
Sopen00g012220 Solanum pennellii HOM05D008169 ORTHO05D004497 1.4e-09 65.5 36 80.6
Solyc00g500355.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.0e-09 63.9 48 70.8
Solyc03g004000.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.0e-09 63.9 34 79.4
Solyc10g083063.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.0e-09 63.9 48 66.7
Solyc03g026411.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.2e-08 62.4 38 76.3
Sopen09g030910 Solanum pennellii HOM05D008169 ORTHO05D013631 1.5e-08 62.0 55 56.4
Solyc09g072500.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 3.4e-08 60.8 48 60.4
Sopen10g008280 Solanum pennellii HOM05D008169 ORTHO05D009932 1.4e-06 55.5 46 60.9
Solyc02g014872.1 Solanum lycopersicum HOM05D008169 ORTHO05D391201 3.2e-06 54.3 35 65.7


User provided reference genes

Program Settings