Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g010180.4 Solanum lycopersicum HOM05D000283 ORTHO05D006673 1.4e-87 326.2 167 100.0
Sopen04g005360 Solanum pennellii HOM05D000283 ORTHO05D006673 3.1e-82 308.5 167 96.4
PGSC0003DMG400011483 Solanum tuberosum HOM05D000283 ORTHO05D006673 3.5e-78 295.0 167 91.6
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 3.5e-62 241.9 166 75.9
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 1.3e-56 223.4 166 71.7
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 6.0e-54 214.5 167 67.7
PGSC0003DMG400011487 Solanum tuberosum HOM05D000283 ORTHO05D006673 2.3e-37 159.5 158 57.6
Sopen04g005270 Solanum pennellii HOM05D000283 ORTHO05D006673 2.2e-16 89.7 64 67.2
PGSC0003DMG400011491 Solanum tuberosum HOM05D000283 ORTHO05D006673 2.9e-16 89.4 56 76.8
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 5.5e-15 85.1 147 41.5
PGSC0003DMG400011471 Solanum tuberosum HOM05D000283 ORTHO05D006673 4.7e-14 82.0 130 43.8
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 1.7e-11 73.6 144 36.1
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 6.3e-11 71.6 149 38.9
MSTRG.8954 Avicennia marina HOM05D000283 ORTHO05D006673 4.1e-10 68.9 168 35.7
Sopen04g005310 Solanum pennellii HOM05D000283 ORTHO05D006673 4.1e-10 68.9 93 47.3
Migut.F00680 Erythranthe guttata HOM05D000283 ORTHO05D006673 5.3e-10 68.6 150 35.3
Cc02_g08660 Coffea canephora HOM05D000283 ORTHO05D006673 4.5e-09 65.5 148 37.2
Oeu025162.3 Olea europaea HOM05D000283 ORTHO05D006673 7.7e-09 64.7 150 37.3
Oeu025164.1 Olea europaea HOM05D000283 ORTHO05D010811 7.7e-09 64.7 150 37.3
Oeu025165.1 Olea europaea HOM05D008194 ORTHO05D010811 7.7e-09 64.7 150 37.3
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 1.3e-08 63.9 161 36.6
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 2.9e-08 62.8 122 39.3
Nn2g11490 Nelumbo nucifera HOM05D000283 ORTHO05D006673 3.8e-08 62.4 105 39.0
Sopen04g005290 Solanum pennellii HOM05D000312 ORTHO05D000221 6.5e-08 61.6 60 58.3
Prupe.2G224500 Prunus persica HOM05D000283 ORTHO05D006673 1.1e-07 60.8 155 34.8
Cpa.g.sc1.301 Carica papaya HOM05D000283 ORTHO05D006673 2.5e-07 59.7 121 37.2
Actinidia29198 Actinidia chinensis HOM05D000283 ORTHO05D006673 4.2e-07 58.9 149 33.6
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 4.2e-07 58.9 161 36.0
MD01G1117200 Malus domestica HOM05D000283 ORTHO05D006673 4.2e-07 58.9 123 39.8
MD07G1184600 Malus domestica HOM05D000283 ORTHO05D006673 4.2e-07 58.9 122 39.3
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 7.2e-07 58.2 152 31.6
Haze_16971 Corylus avellana HOM05D000283 ORTHO05D006673 2.7e-06 56.2 126 35.7
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla HOM05D000283 ORTHO05D006673 2.7e-06 56.2 175 31.4
Lj8A92T85 Lonicera japonica HOM05D000283 ORTHO05D006673 3.6e-06 55.8 105 40.0
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 8.0e-06 54.7 148 34.5


User provided reference genes

Program Settings