Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 8.1e-181 637.1 361 100.0
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 1.4e-172 609.8 362 97.2
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 4.1e-156 555.1 381 86.9
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.3e-122 443.7 361 77.3
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 8.3e-117 424.5 363 72.7
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 4.3e-113 412.1 351 66.7
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 5.6e-113 411.8 364 70.3
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 7.5e-110 401.4 358 66.2
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 1.3e-109 400.6 358 64.5
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.7e-109 400.2 358 65.9
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 4.9e-109 398.7 346 64.7
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 4.6e-107 392.1 359 67.1
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 4.6e-107 392.1 365 65.8
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.3e-106 390.6 361 65.9
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 3.0e-106 389.4 404 61.1
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 3.9e-106 389.0 363 67.8
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 6.6e-106 388.3 358 61.5
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 8.6e-106 387.9 358 62.3
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 1.9e-105 386.7 332 66.0
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 1.9e-105 386.7 358 63.4
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 2.5e-105 386.3 360 65.0
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.3e-105 386.0 358 62.0
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 3.3e-105 386.0 335 69.6
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 1.2e-104 384.0 349 67.3
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 1.2e-104 384.0 389 63.5
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 1.6e-104 383.6 360 61.7
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 2.1e-104 383.3 378 65.1
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 4.7e-104 382.1 371 65.5
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 8.1e-104 381.3 370 63.0
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 1.1e-103 380.9 359 63.8
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 4.0e-103 379.0 351 67.8
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 5.2e-103 378.6 363 69.7
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.5e-102 377.1 357 63.3
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 9.8e-102 374.4 363 63.1
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 1.7e-101 373.6 373 59.2
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 2.9e-101 372.9 353 64.9
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 4.9e-101 372.1 345 65.5
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.1e-100 370.9 351 63.0
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 2.4e-100 369.8 371 58.5
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 5.4e-100 368.6 296 73.0
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 7.8e-99 364.8 363 60.3
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 2.3e-98 363.2 363 60.3
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.5e-97 360.5 373 58.7
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.9e-97 360.1 361 59.8
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.9e-97 360.1 361 59.8
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 1.9e-97 360.1 361 59.6
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 3.3e-97 359.4 370 60.5
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 9.5e-97 357.8 367 58.9
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.5e-97 357.8 338 60.4
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 1.2e-96 357.5 315 74.3
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 1.6e-96 357.1 361 59.3
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 2.1e-96 356.7 371 62.3
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 4.7e-96 355.5 367 61.9
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 8.1e-96 354.8 340 66.8
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.4e-95 354.0 296 69.3
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 1.8e-95 353.6 359 62.4
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 6.8e-95 351.7 364 63.2
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 3.4e-94 349.4 378 60.8
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 3.4e-94 349.4 359 57.9
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 4.4e-94 349.0 363 60.6
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 3.8e-93 345.9 394 56.1
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 8.4e-93 344.7 353 60.9
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 1.9e-92 343.6 349 66.5
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 2.4e-92 343.2 355 61.1
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 7.1e-92 341.7 324 63.9
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 1.2e-91 340.9 356 61.8
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 2.3e-90 336.7 354 59.0
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 3.9e-90 335.9 355 60.3
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 5.6e-89 332.0 359 60.7
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 1.6e-88 330.5 367 55.9
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 2.8e-88 329.7 370 59.7
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 6.2e-88 328.6 362 59.9
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 5.2e-87 325.5 406 56.2
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 1.1e-84 317.8 381 57.7
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 1.9e-84 317.0 297 65.0
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 4.2e-84 315.8 297 66.0
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.2e-83 314.3 276 62.7
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 3.5e-83 312.8 354 55.6
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 2.5e-81 306.6 373 55.5
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 4.3e-81 305.8 410 53.7
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 4.8e-80 302.4 363 52.1
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 8.1e-80 301.6 365 51.5
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 4.5e-78 295.8 367 52.6
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 9.9e-78 294.7 355 54.6
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 3.2e-76 289.7 404 52.7
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 6.0e-75 285.4 363 54.0
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 3.9e-74 282.7 374 51.3
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 2.5e-73 280.0 359 49.6
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 2.2e-69 266.9 267 66.3
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.3e-66 257.7 364 53.6
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.1e-60 238.0 382 47.1
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.5e-60 236.9 375 46.7
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.1e-57 228.0 338 45.0
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 2.8e-56 223.4 310 51.0
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 2.6e-54 216.9 338 45.3
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.1e-52 211.5 258 58.5
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.1e-52 211.5 277 53.1
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 1.6e-51 207.6 356 47.2
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 5.7e-49 199.1 411 41.6
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 2.4e-47 193.7 273 45.8
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 2.0e-46 190.7 243 49.8
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 2.3e-42 177.2 300 46.3
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 3.7e-40 169.9 158 58.2
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 6.3e-40 169.1 115 80.9
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.4e-39 167.2 171 56.7
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 6.9e-39 165.6 386 39.4
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.9e-36 157.5 194 51.0
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 1.1e-28 131.7 197 55.8
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 6.5e-21 105.9 68 85.3
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 6.5e-21 105.9 62 88.7
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 1.6e-19 101.3 308 40.6
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 1.0e-18 98.6 299 34.8
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 2.7e-14 84.0 173 40.5
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 7.7e-14 82.4 175 39.4
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 1.7e-13 81.3 130 40.8
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 5.7e-09 66.2 48 62.5
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 7.5e-09 65.9 141 42.6
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 1.7e-08 64.7 88 52.3
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 4.5e-06 56.6 68 52.9


User provided reference genes

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