Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 1.3e-145 519.6 256 100.0
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 1.9e-144 515.8 256 98.4
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 2.8e-143 511.9 256 97.7
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 3.4e-133 478.4 256 91.0
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 2.9e-116 422.2 259 80.7
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 1.2e-114 416.8 251 80.9
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.0e-113 413.7 248 83.1
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 3.0e-113 412.1 259 76.4
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 4.1e-110 401.7 259 73.0
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 1.2e-109 400.2 258 75.2
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 1.6e-109 399.8 260 74.2
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 1.3e-108 396.7 239 79.9
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 2.9e-108 395.6 258 74.0
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.1e-107 393.7 256 72.3
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 7.2e-107 391.0 238 76.9
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 1.6e-106 389.8 245 73.5
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 8.0e-106 387.5 240 75.8
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.0e-105 387.1 242 74.8
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 6.7e-105 384.4 237 76.8
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 1.2e-104 383.6 240 75.8
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 1.2e-104 383.6 260 71.2
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 3.3e-104 382.1 240 75.4
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 3.3e-104 382.1 240 75.4
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 4.4e-104 381.7 302 64.6
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 4.4e-104 381.7 259 70.7
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 5.7e-104 381.3 251 72.9
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 7.5e-104 380.9 240 74.6
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 2.8e-103 379.0 240 75.0
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 4.8e-103 378.3 240 75.4
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 6.3e-103 377.9 240 72.9
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 8.2e-103 377.5 239 74.9
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 1.4e-102 376.7 240 72.1
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 5.3e-102 374.8 259 68.3
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 5.3e-102 374.8 183 97.3
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 7.0e-102 374.4 240 72.5
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 1.2e-101 373.6 258 70.5
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 4.5e-101 371.7 240 73.3
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 7.7e-101 370.9 242 71.5
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 6.5e-100 367.9 240 70.8
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 8.5e-100 367.5 241 72.6
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 1.1e-99 367.1 237 73.8
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 1.1e-99 367.1 240 72.9
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 1.1e-99 367.1 240 70.0
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 3.2e-99 365.5 240 70.8
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 4.2e-99 365.2 258 69.8
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 1.6e-98 363.2 240 71.7
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 4.7e-98 361.7 240 70.0
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 4.7e-98 361.7 240 68.8
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 6.1e-98 361.3 240 71.2
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.8e-97 359.8 255 67.8
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 6.8e-97 357.8 240 72.1
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 2.6e-96 355.9 252 69.4
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 2.6e-96 355.9 240 67.9
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 4.4e-96 355.1 258 65.9
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.2e-95 352.8 240 69.2
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 2.2e-95 352.8 254 66.9
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 6.3e-95 351.3 255 66.7
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 7.0e-94 347.8 255 65.9
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 2.0e-93 346.3 255 66.3
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 2.7e-93 345.9 243 67.9
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 4.5e-93 345.1 256 64.8
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 1.7e-92 343.2 254 64.6
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 2.3e-92 342.8 256 64.5
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 2.3e-92 342.8 256 64.5
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 2.3e-92 342.8 242 67.4
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 2.3e-92 342.8 252 66.3
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 2.9e-92 342.4 256 64.5
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 3.8e-92 342.0 239 67.8
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 5.0e-92 341.7 269 62.8
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 6.6e-92 341.3 255 66.3
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 6.6e-92 341.3 256 64.5
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.1e-91 340.5 256 64.5
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 1.5e-91 340.1 240 67.5
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 1.9e-91 339.7 240 66.7
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 4.7e-90 335.1 260 63.8
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 6.1e-90 334.7 259 66.8
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 4.0e-89 332.0 235 66.0
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 3.1e-86 322.4 290 57.6
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 5.4e-86 321.6 258 60.9
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 2.0e-85 319.7 258 60.5
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 1.2e-82 310.5 194 73.7
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 1.6e-82 310.1 255 58.0
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 8.0e-82 307.8 255 57.3
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 6.8e-81 304.7 189 70.9
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 6.8e-81 304.7 237 59.9
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.3e-79 300.4 256 55.5
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 3.7e-79 298.9 183 77.0
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 8.6e-76 287.7 237 60.3
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.1e-74 283.1 233 55.4
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.1e-73 280.8 233 54.5
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 3.4e-72 275.8 183 69.9
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 6.0e-69 265.0 183 67.2
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 2.1e-66 256.5 235 50.6
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 4.7e-66 255.4 183 64.5
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.4e-65 253.8 239 49.8
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.0e-64 250.0 188 64.4
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 2.0e-64 250.0 182 65.4
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 2.6e-64 249.6 238 48.7
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 7.5e-64 248.1 181 63.0
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 2.5e-59 233.0 238 46.2
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.2e-58 230.7 179 63.1
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 1.8e-57 226.9 231 45.0
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 2.4e-57 226.5 205 51.7
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 5.2e-57 225.3 230 47.8
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.3e-55 220.7 216 47.7
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 4.0e-49 199.1 158 53.2
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 1.7e-47 193.7 110 74.5
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 6.4e-47 191.8 248 49.6
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 1.4e-41 174.1 180 42.8
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.5e-35 154.1 182 41.8
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 6.9e-33 145.2 208 35.6
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 4.9e-31 139.0 106 66.0
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 9.0e-25 118.2 242 27.3


User provided reference genes

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