Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g009160.4 Solanum lycopersicum HOM05D018540 ORTHO05D009989 4.7e-168 594.7 365 100.0
Sopen04g004280 Solanum pennellii HOM05D018540 ORTHO05D009989 4.4e-150 535.0 354 94.4
PGSC0003DMG401032547 Solanum tuberosum HOM05D018540 ORTHO05D009989 9.9e-126 454.1 354 82.8
CAN.G194.6 Capsicum annuum HOM05D018540 ORTHO05D009989 4.6e-115 418.7 359 77.4
Nitab4.5_0000129g0300 Nicotiana tabacum HOM05D018540 ORTHO05D009989 3.4e-102 375.9 361 75.6
Nitab4.5_0001419g0040 Nicotiana tabacum HOM05D018540 ORTHO05D009989 1.3e-98 364.0 362 71.0
Peaxi162Scf00329g00616 Petunia axillaris HOM05D018540 ORTHO05D009989 1.2e-78 297.7 360 65.6
Oeu006352.1 Olea europaea HOM05D008035 ORTHO05D009989 5.1e-13 79.7 164 39.6
Actinidia13747 Actinidia chinensis HOM05D008035 ORTHO05D009989 7.3e-12 75.9 370 27.3
Thecc.02G310100 Theobroma cacao HOM05D008035 ORTHO05D009989 1.6e-11 74.7 163 38.0
Dinv19126 Davidia involucrata HOM05D008035 ORTHO05D009989 3.6e-11 73.6 377 26.8
Cpa.g.sc47.48 Carica papaya HOM05D008035 ORTHO05D009989 1.4e-10 71.6 163 35.6
Cc09_g07870 Coffea canephora HOM05D008035 ORTHO05D009989 2.4e-10 70.9 373 27.3
Manes.07G076000 Manihot esculenta HOM05D008035 ORTHO05D009989 2.0e-09 67.8 165 34.5
TWI77G0842 Tripterygium wilfordii HOM05D008035 ORTHO05D009989 5.8e-09 66.2 351 24.2
Cfa015124 Carpinus fangiana HOM05D008035 ORTHO05D009989 6.4e-08 62.8 166 32.5
Glyma.11G104700 Glycine max HOM05D008035 ORTHO05D009989 6.4e-08 62.8 161 30.4
COL.COLO4_27646 Corchorus olitorius HOM05D008035 ORTHO05D009989 8.4e-08 62.4 169 33.7
Gorai.005G151800 Gossypium raimondii HOM05D008035 ORTHO05D009989 1.1e-07 62.0 162 32.1
Rhsim02G0032700 Rhododendron simsii HOM05D008035 ORTHO05D009989 1.1e-07 62.0 371 26.4
Gohir.D02G135800 Gossypium hirsutum HOM05D008035 ORTHO05D009989 1.4e-07 61.6 169 33.1
MD13G1008600 Malus domestica HOM05D008035 ORTHO05D009989 1.9e-07 61.2 381 25.5
ClCG07G006990 Citrullus lanatus HOM05D008035 ORTHO05D009989 3.2e-07 60.5 365 24.9
Duzib251G0092 Durio zibethinus HOM05D008035 ORTHO05D009989 3.2e-07 60.5 162 33.3
TAR622G0561 Trochodendron aralioides HOM05D008035 ORTHO05D009989 3.2e-07 60.5 379 26.1
FAN17G2557 Fragaria x ananassa HOM05D008035 ORTHO05D009989 4.2e-07 60.1 385 23.9
Gohir.A03G111200 Gossypium hirsutum HOM05D008035 ORTHO05D009989 4.2e-07 60.1 164 31.7
Sed0009587 Sechium edule HOM05D008035 ORTHO05D009989 4.2e-07 60.1 354 26.6
vmacro10801 Vaccinium macrocarpon HOM05D008035 ORTHO05D009989 5.4e-07 59.7 375 27.2
FAN12G0504 Fragaria x ananassa HOM05D008035 ORTHO05D009989 7.1e-07 59.3 400 24.2
Prupe.1G344100 Prunus persica HOM05D008035 ORTHO05D009989 7.1e-07 59.3 170 33.5
FvH4_4g36500 Fragaria vesca HOM05D008035 ORTHO05D009989 9.3e-07 58.9 400 24.2
Cpa.g.sc953.4 Carica papaya HOM05D008035 ORTHO05D009989 1.6e-06 58.2 163 31.9
QL03p043104 Quercus lobata HOM05D008035 ORTHO05D009989 3.5e-06 57.0 366 26.8
Haze_01546 Corylus avellana HOM05D008035 ORTHO05D009989 4.6e-06 56.6 167 32.9
CiPaw.05G166000 Carya illinoinensis HOM05D008035 ORTHO05D009989 6.0e-06 56.2 359 25.1
Eucgr.G02562 Eucalyptus grandis HOM05D008035 ORTHO05D009989 6.0e-06 56.2 167 31.7
FAN07G0714 Fragaria x ananassa HOM05D008035 ORTHO05D009989 6.0e-06 56.2 406 22.7
Sabra08G0110500 Salix brachista HOM05D008035 ORTHO05D009989 6.0e-06 56.2 83 41.0
GSVIVG01010227001 Vitis vinifera HOM05D008035 ORTHO05D009989 6.0e-06 56.2 260 29.2


User provided reference genes

Program Settings