Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g007990.1 Solanum lycopersicum HOM05D007313 ORTHO05D005299 6.1e-32 140.2 71 100.0
Sopen04g003130 Solanum pennellii HOM05D007313 ORTHO05D005299 1.5e-30 135.6 71 97.2
PGSC0003DMG400029516 Solanum tuberosum HOM05D007313 ORTHO05D005299 8.6e-26 119.8 71 90.1
DCAR_023578 Daucus carota HOM05D007313 ORTHO05D005299 7.8e-11 70.1 56 62.5
Dinv10480 Davidia involucrata HOM05D007313 ORTHO05D005299 3.9e-10 67.8 56 64.3
Rhsim09G0090300 Rhododendron simsii HOM05D007313 ORTHO05D005299 3.9e-10 67.8 60 66.7
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 1.9e-09 65.5 77 53.2
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 4.3e-09 64.3 76 50.0
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 4.3e-09 64.3 81 55.6
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 4.3e-09 64.3 79 54.4
DCAR_026801 Daucus carota HOM05D007313 ORTHO05D005299 7.3e-09 63.5 85 48.2
AT1G67920 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 1.2e-08 62.8 63 60.3
CSS0045507 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 1.2e-08 62.8 68 60.3
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.2e-08 62.8 54 63.0
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 1.2e-08 62.8 54 63.0
Manes.15G133700 Manihot esculenta HOM05D007313 ORTHO05D005299 1.6e-08 62.4 57 63.2
Potri.008G134100 Populus trichocarpa HOM05D007313 ORTHO05D005299 2.1e-08 62.0 54 64.8
AL2G26720 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 2.8e-08 61.6 63 58.7
CSS0007506 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 2.8e-08 61.6 68 58.8
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.8e-08 61.6 78 52.6
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.8e-08 61.6 78 52.6
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 2.8e-08 61.6 78 52.6
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 3.6e-08 61.2 61 59.0
ECA233G5799 Erigeron canadensis HOM05D007313 ORTHO05D005299 4.7e-08 60.8 64 53.1
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 6.2e-08 60.5 75 52.0
Migut.E00472 Erythranthe guttata HOM05D007313 ORTHO05D005299 1.4e-07 59.3 76 48.7
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 2.4e-07 58.5 83 47.0
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 3.1e-07 58.2 53 60.4
CARHR060560 Cardamine hirsuta HOM05D007313 ORTHO05D005299 5.2e-07 57.4 66 51.5
Carub.0002s1441 Capsella rubella HOM05D007313 ORTHO05D005299 6.8e-07 57.0 63 54.0
Sp5g22920 Schrenkiella parvula HOM05D007313 ORTHO05D005299 1.5e-06 55.8 63 55.6
BcaB05g24323 Brassica carinata HOM05D007313 ORTHO05D005299 2.0e-06 55.5 66 54.5
SalBow2G1257 Salvia bowleyana HOM05D007313 ORTHO05D005299 2.0e-06 55.5 55 61.8
TAR371G1237 Trochodendron aralioides HOM05D008500 ORTHO05D005299 2.0e-06 55.5 79 46.8
TAR371G0465 Trochodendron aralioides HOM05D008500 ORTHO05D005299 2.6e-06 55.1 79 46.8
BcaB03g15149 Brassica carinata HOM05D007313 ORTHO05D005299 3.4e-06 54.7 63 55.6
CARHR026470 Cardamine hirsuta HOM05D007313 ORTHO05D005299 4.4e-06 54.3 71 47.9
Sabra08G0102600 Salix brachista HOM05D007313 ORTHO05D005299 4.4e-06 54.3 51 58.8
AT1G24600 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 5.8e-06 53.9 66 47.0
BcaC03g14888 Brassica carinata HOM05D007313 ORTHO05D005299 5.8e-06 53.9 66 53.0
BcaC08g46215 Brassica carinata HOM05D007313 ORTHO05D005299 5.8e-06 53.9 53 58.5
C02p23620 Brassica napus HOM05D007313 ORTHO05D005299 5.8e-06 53.9 66 53.0
BolC2t08492H Brassica oleracea HOM05D007313 ORTHO05D005299 5.8e-06 53.9 66 53.0
BolC6t39221H Brassica oleracea HOM05D007313 ORTHO05D005299 5.8e-06 53.9 53 58.5
BraA07t31073Z Brassica rapa HOM05D007313 ORTHO05D005299 7.6e-06 53.5 63 54.0
Carub.0001s2549 Capsella rubella HOM05D007313 ORTHO05D005299 7.6e-06 53.5 68 48.5
Potri.010G107200 Populus trichocarpa HOM05D007313 ORTHO05D005299 7.6e-06 53.5 53 60.4
Sp1g23170 Schrenkiella parvula HOM05D007313 ORTHO05D005299 7.6e-06 53.5 71 49.3
BcaB03g12049 Brassica carinata HOM05D007313 ORTHO05D005299 9.9e-06 53.1 77 48.1
BcaB03g15385 Brassica carinata HOM05D007313 ORTHO05D005299 9.9e-06 53.1 69 52.2
A07p34460 Brassica napus HOM05D007313 ORTHO05D005299 9.9e-06 53.1 63 54.0
CANSAT01G0361 Cannabis sativa HOM05D007313 ORTHO05D005299 9.9e-06 53.1 76 42.1


User provided reference genes

Program Settings