Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.6e-67 259.2 129 100.0
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 8.3e-19 97.4 123 43.9
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.8e-18 96.3 132 40.9
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 3.6e-14 82.0 114 41.2
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.1e-13 80.5 125 40.0
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 2.3e-13 79.3 126 39.7
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 3.1e-13 79.0 130 37.7
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 4.0e-13 78.6 120 41.7
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 3.4e-12 75.5 111 41.4
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 4.4e-12 75.1 123 39.8
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 5.8e-12 74.7 93 41.9
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 5.8e-12 74.7 93 41.9
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 9.8e-12 73.9 121 37.2
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 2.9e-11 72.4 121 38.0
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 3.7e-11 72.0 84 45.2
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 4.9e-11 71.6 125 39.2
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 1.9e-10 69.7 125 32.0
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 2.4e-10 69.3 101 39.6
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 4.1e-10 68.6 87 42.5
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 9.2e-10 67.4 125 34.4
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 2.0e-09 66.2 100 41.0
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.7e-09 65.9 115 38.3
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 2.7e-09 65.9 127 35.4
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 4.6e-09 65.1 101 36.6
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 4.6e-09 65.1 104 38.5
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 1.0e-08 63.9 114 35.1
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 1.0e-08 63.9 125 36.0
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 3.0e-08 62.4 123 34.1
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 3.0e-08 62.4 104 38.5
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 3.0e-08 62.4 113 34.5
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 3.0e-08 62.4 129 31.0
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 3.9e-08 62.0 99 37.4
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 5.0e-08 61.6 112 38.4
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 5.0e-08 61.6 112 38.4
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 5.0e-08 61.6 91 40.7
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 5.0e-08 61.6 99 38.4
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 1.1e-07 60.5 115 34.8
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 1.1e-07 60.5 99 37.4
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.1e-07 60.5 99 37.4
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.5e-07 60.1 112 37.5
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 1.5e-07 60.1 125 32.8
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 1.9e-07 59.7 126 31.7
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 1.9e-07 59.7 113 36.3
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.9e-07 59.7 99 38.4
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.9e-07 59.7 99 38.4
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 4.3e-07 58.5 104 37.5
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 5.6e-07 58.2 131 35.1
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 7.3e-07 57.8 103 36.9
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 7.3e-07 57.8 125 36.8
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.2e-06 57.0 100 37.0
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 1.6e-06 56.6 128 34.4
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 2.1e-06 56.2 131 34.4
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 3.6e-06 55.5 107 35.5
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 4.7e-06 55.1 103 34.0
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 6.2e-06 54.7 125 36.0
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 6.2e-06 54.7 124 31.5
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 8.1e-06 54.3 103 35.0
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 8.1e-06 54.3 124 29.8


User provided reference genes

Program Settings