Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 2.4e-156 555.4 281 100.0
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 3.1e-151 538.5 281 96.8
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 2.4e-148 528.9 284 95.1
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 1.6e-128 463.0 293 84.0
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 3.9e-122 441.8 244 90.6
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 4.6e-115 418.3 285 79.3
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 6.0e-115 417.9 280 76.1
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 3.0e-114 415.6 284 75.0
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 1.1e-113 413.7 292 73.6
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 9.6e-113 410.6 283 74.2
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 6.3e-112 407.9 283 74.9
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.5e-110 403.3 267 76.0
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 1.0e-109 400.6 282 72.0
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 1.7e-109 399.8 242 80.2
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 6.5e-109 397.9 251 79.3
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 6.5e-109 397.9 243 80.2
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 1.4e-108 396.7 284 72.5
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 9.3e-108 394.0 282 72.7
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.2e-107 393.7 241 80.9
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 1.2e-107 393.7 280 71.1
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 3.6e-107 392.1 280 70.0
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 1.3e-106 390.2 285 70.5
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 3.0e-106 389.0 283 70.7
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 3.9e-106 388.7 292 69.5
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 6.7e-106 387.9 282 70.2
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 8.7e-106 387.5 277 70.4
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.5e-105 386.7 240 80.4
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 5.7e-105 384.8 241 78.8
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 7.4e-105 384.4 242 78.1
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.6e-104 383.3 236 80.5
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 1.6e-104 383.3 282 70.2
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.6e-104 383.3 286 66.4
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 4.8e-104 381.7 243 76.1
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.8e-104 381.7 287 70.7
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.8e-104 381.7 287 71.1
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 8.2e-104 380.9 279 69.5
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 1.1e-103 380.6 284 68.7
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 1.4e-103 380.2 241 75.9
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 1.8e-103 379.8 243 77.8
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 2.4e-103 379.4 295 65.8
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 4.1e-103 378.6 284 69.4
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 4.1e-103 378.6 286 71.0
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.1e-103 378.6 286 71.0
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 5.3e-103 378.3 283 67.8
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 9.1e-103 377.5 288 68.8
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 9.1e-103 377.5 288 68.8
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 3.4e-102 375.6 281 70.5
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 4.5e-102 375.2 282 68.4
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 5.9e-102 374.8 267 70.4
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 1.3e-101 373.6 268 69.0
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 2.9e-101 372.5 273 69.6
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.4e-100 370.2 288 67.4
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 1.4e-100 370.2 291 66.0
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 1.4e-100 370.2 285 69.5
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 7.2e-100 367.9 243 72.8
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 3.6e-99 365.5 251 74.1
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 3.6e-99 365.5 296 65.5
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 4.6e-99 365.2 264 70.8
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 8.8e-98 360.9 279 67.0
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.3e-96 357.1 290 65.9
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 2.2e-96 356.3 283 64.7
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 8.2e-96 354.4 287 64.1
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 2.4e-95 352.8 243 70.0
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 2.4e-95 352.8 287 64.5
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 5.3e-95 351.7 239 72.8
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.2e-94 350.5 271 69.0
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 1.5e-94 350.1 270 62.6
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 1.0e-93 347.4 225 77.8
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 1.3e-93 347.1 239 72.0
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 1.7e-93 346.7 239 71.5
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 6.5e-93 344.7 239 70.7
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 1.9e-92 343.2 239 71.5
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 3.2e-92 342.4 225 72.4
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 2.1e-91 339.7 275 65.1
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 2.7e-91 339.3 267 66.3
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 6.1e-91 338.2 239 69.9
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.8e-90 336.7 266 65.0
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 3.9e-90 335.5 245 69.4
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 5.2e-90 335.1 254 68.9
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 2.0e-89 333.2 285 62.5
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 2.2e-88 329.7 244 65.2
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 4.8e-88 328.6 287 63.4
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 2.6e-86 322.8 225 70.7
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 2.6e-86 322.8 225 70.7
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 7.7e-86 321.2 273 62.6
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 1.0e-85 320.9 261 64.4
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 1.3e-85 320.5 287 59.9
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 5.0e-85 318.5 241 65.6
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 7.5e-81 304.7 188 79.8
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 7.5e-81 304.7 261 62.1
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 9.1e-79 297.7 250 59.2
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 1.6e-78 297.0 201 74.6
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 3.8e-77 292.4 250 60.4
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.2e-75 287.3 239 63.2
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 1.0e-69 267.7 184 71.7
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 6.3e-64 248.4 289 51.2
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 7.0e-63 245.0 228 55.3
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 7.8e-62 241.5 231 54.5
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 3.8e-61 239.2 287 50.5
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 4.7e-59 232.3 279 52.3
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 8.3e-56 221.5 230 48.3
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 6.4e-48 195.3 132 72.7
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 6.8e-42 175.3 239 39.7
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 7.5e-41 171.8 228 37.7
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 2.8e-35 153.3 244 36.5
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.6e-30 137.5 89 71.9
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 2.7e-30 136.7 224 40.6
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 2.7e-22 110.2 121 48.8
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 7.3e-20 102.1 84 54.8
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.7e-16 90.9 59 71.2
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 1.0e-13 81.6 45 82.2
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 6.7e-13 79.0 61 60.7
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 4.3e-12 76.3 103 45.6
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 9.0e-10 68.6 70 55.7
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 9.0e-10 68.6 70 55.7
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 2.6e-09 67.0 70 54.3
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.7e-08 64.3 53 52.8
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.4e-08 62.0 51 54.9
Rhsim03G0260900 Rhododendron simsii HOM05D021265 ORTHO05D339689 6.0e-06 55.8 49 55.1


User provided reference genes

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