Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 0.0e+00 2202.9 1230 100.0
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 0.0e+00 2157.1 1230 97.5
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 0.0e+00 1553.5 1138 79.4
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 0.0e+00 1544.3 1247 73.9
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 3.2e-277 959.1 1235 54.7
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 2.7e-268 929.5 1272 53.0
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 1.3e-259 900.6 1272 52.0
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 2.8e-233 813.1 1277 47.7
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 2.2e-230 803.5 1306 48.6
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 3.5e-215 753.1 1109 49.2
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 3.5e-215 753.1 1303 47.9
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 2.5e-213 746.9 1276 46.9
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 8.8e-211 738.4 1280 45.6
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 5.7e-210 735.7 1258 43.9
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 4.1e-208 729.6 1288 45.5
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 1.2e-207 728.0 1301 45.7
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 1.5e-205 721.1 1217 47.2
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 7.3e-205 718.8 1214 46.7
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 2.1e-204 717.2 1281 46.3
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 9.8e-202 708.4 1275 44.9
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 1.8e-200 704.1 1278 45.7
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 1.7e-198 697.6 1259 45.4
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 1.6e-196 691.0 1227 45.6
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 1.0e-195 688.3 1280 44.5
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 2.3e-195 687.2 1280 44.4
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 4.4e-194 682.9 1286 44.2
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 9.8e-194 681.8 1278 44.3
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 1.4e-192 677.9 1242 45.6
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.6e-191 674.5 1286 45.6
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 3.9e-190 669.8 1266 43.5
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 3.3e-189 666.8 1248 44.9
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 9.5e-189 665.2 1290 45.5
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 1.8e-187 661.0 1212 45.0
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 1.5e-186 657.9 1288 44.6
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 3.4e-186 656.8 1280 44.1
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 5.8e-186 656.0 1196 44.4
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 9.8e-186 655.2 1287 45.4
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 2.2e-185 654.1 1276 44.0
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 8.3e-185 652.1 1228 41.4
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 1.5e-181 641.3 1255 43.8
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 2.3e-179 634.0 1221 45.0
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 3.4e-178 630.2 1278 43.2
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 7.6e-178 629.0 1279 43.4
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 4.9e-177 626.3 1304 43.1
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 8.4e-177 625.5 1280 43.4
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 1.0e-174 618.6 1289 43.1
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 1.3e-174 618.2 1175 44.1
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 2.8e-172 610.5 1282 42.8
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 4.4e-170 603.2 1287 42.3
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 3.8e-169 600.1 1275 43.1
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 1.1e-168 598.6 1283 43.0
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 7.1e-168 595.9 1289 42.3
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 7.1e-168 595.9 1427 38.7
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 2.4e-163 580.9 1293 41.5
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 4.9e-161 573.2 1244 40.6
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 1.1e-160 572.0 1285 41.5
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 2.4e-160 570.9 1278 42.4
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 5.4e-160 569.7 1284 42.5
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 7.9e-159 565.8 1286 40.9
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 5.1e-158 563.1 1287 42.0
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 5.6e-157 559.7 1265 37.7
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 6.9e-155 552.7 1077 43.8
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 7.9e-151 539.3 1273 40.1
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 8.7e-150 535.8 1250 39.8
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 3.3e-149 533.9 1275 39.9
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 1.6e-148 531.6 1244 37.7
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 8.1e-148 529.3 1281 41.5
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 2.4e-147 527.7 1309 36.9
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 6.9e-147 526.2 1275 40.5
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 2.9e-145 520.8 1211 41.1
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 1.9e-144 518.1 1024 40.6
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 3.2e-144 517.3 1291 42.4
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 1.6e-143 515.0 1325 37.4
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 2.3e-142 511.1 1240 39.8
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 5.1e-142 510.0 1321 40.4
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 1.1e-133 482.3 1197 39.5
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 3.7e-132 477.2 1234 40.1
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 6.5e-121 439.9 1238 37.3
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 4.7e-119 433.7 1275 38.0
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 1.0e-118 432.6 1203 34.1
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 1.0e-118 432.6 1041 40.3
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 2.6e-117 427.9 1294 35.9
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 3.3e-117 427.6 854 43.9
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 4.8e-116 423.7 1265 36.6
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 5.3e-115 420.2 1257 36.9
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 2.9e-113 414.5 1240 36.4
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 6.5e-113 413.3 1229 33.2
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 8.8e-110 402.9 1252 36.4
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 5.0e-105 387.1 1150 38.9
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 5.5e-104 383.6 1220 35.4
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 2.7e-103 381.3 1220 35.4
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 2.7e-103 381.3 1220 35.4
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.2e-101 375.9 886 35.2
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 4.8e-100 370.5 1262 35.8
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 2.4e-99 368.2 1207 34.3
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 7.0e-99 366.7 1267 34.4
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 9.1e-99 366.3 500 47.8
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 1.2e-98 365.9 1209 34.3
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 1.6e-98 365.5 1263 35.5
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 7.7e-98 363.2 1058 37.7
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 2.7e-90 338.2 1265 33.0
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 1.1e-83 316.2 1252 32.6
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.3e-81 308.5 440 48.4
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.6e-79 302.4 334 58.7
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 6.2e-79 300.4 1144 33.7
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 1.5e-77 295.8 1233 32.0
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 2.2e-76 292.0 1277 31.8
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 2.2e-68 265.4 1110 31.0
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 6.4e-68 263.8 725 33.4
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 9.2e-67 260.0 609 36.0
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 6.0e-66 257.3 1245 31.2
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 2.5e-64 251.9 1047 33.5
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 1.5e-53 216.1 1204 29.6
PGSC0003DMG400002508 Solanum tuberosum HOM05D004845 ORTHO05D005957 1.5e-53 216.1 132 93.2
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 7.6e-53 213.8 225 56.9
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 1.2e-50 206.5 312 43.9
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 2.7e-50 205.3 276 51.1
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 3.3e-48 198.4 1060 27.6
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 5.4e-43 181.0 501 33.3
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 4.6e-42 177.9 1051 29.9
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 9.6e-40 170.2 209 51.2
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 2.1e-39 169.1 366 37.2
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 3.1e-38 165.2 436 32.6
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 2.2e-36 159.1 347 35.4
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 1.2e-34 153.3 221 46.6
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 6.2e-31 141.0 121 64.5
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 4.0e-30 138.3 129 59.7
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 3.5e-26 125.2 650 26.3
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 3.9e-25 121.7 105 54.3
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.1e-24 120.2 139 59.0
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 7.4e-24 117.5 626 27.5
PGSC0003DMG400013791 Solanum tuberosum HOM05D036438 ORTHO05D033985 1.8e-22 112.8 63 84.1
Ca_23296_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.3e-20 106.7 243 39.5
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 6.5e-20 104.4 177 38.4
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 7.2e-19 100.9 158 33.5
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.6e-18 99.8 112 49.1
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 1.0e-17 97.1 61 72.1
C01p42950 Brassica napus HOM05D004845 ORTHO05D005957 1.4e-17 96.7 163 39.3
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 6.9e-14 84.3 154 45.5
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 3.6e-10 72.0 67 58.2
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 1.0e-09 70.5 71 49.3
SHI11167 Sapria himalayana HOM05D004845 ORTHO05D005957 1.4e-09 70.1 216 31.5
SHI11163 Sapria himalayana HOM05D004845 ORTHO05D005957 2.8e-07 62.4 137 37.2
HPP92_028292 Vanilla planifolia HOM05D004845 ORTHO05D005957 3.1e-06 58.9 680 30.0
CAN.G868.4 Capsicum annuum HOM05D036438 ORTHO05D033985 4.1e-06 58.5 62 56.5
CAN.G793.40 Capsicum annuum HOM05D036438 ORTHO05D033985 7.0e-06 57.8 62 59.7


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