Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 8.6e-193 676.8 334 100.0
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 7.3e-192 673.7 334 99.4
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 2.9e-188 661.8 334 97.9
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 5.2e-174 614.4 334 89.2
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 6.0e-170 600.9 334 89.2
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 8.1e-167 590.5 332 87.7
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 5.1e-161 571.2 332 84.6
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 4.5e-133 478.4 323 70.3
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 1.9e-131 473.0 324 71.3
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 2.5e-131 472.6 315 71.4
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 4.2e-131 471.9 319 70.5
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 4.2e-131 471.9 315 71.4
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 7.2e-131 471.1 320 71.2
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 9.3e-131 470.7 325 70.8
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.6e-130 469.9 319 70.2
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 2.7e-130 469.2 314 72.0
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.7e-130 469.2 314 72.0
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 3.5e-130 468.8 314 73.2
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 4.6e-130 468.4 316 71.2
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 7.9e-130 467.6 319 70.2
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.9e-128 463.0 314 71.0
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.9e-128 463.0 318 71.7
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 5.7e-128 461.5 314 70.1
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 7.4e-128 461.1 324 69.8
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 7.4e-128 461.1 314 70.7
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 7.4e-128 461.1 315 70.8
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 9.7e-128 460.7 324 68.5
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 2.2e-127 459.5 325 68.9
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 8.2e-127 457.6 325 68.9
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.4e-126 456.1 310 70.6
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 3.1e-126 455.7 317 69.4
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.5e-125 453.4 320 69.1
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 3.4e-125 452.2 309 70.6
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 7.7e-125 451.1 325 66.8
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.7e-124 449.9 321 67.3
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.8e-124 448.7 322 68.9
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 1.4e-123 446.8 318 67.3
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 5.5e-123 444.9 321 68.8
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 7.2e-123 444.5 311 70.1
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 1.2e-122 443.7 318 67.0
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.6e-122 443.4 318 66.7
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 1.6e-122 443.4 334 65.9
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.6e-122 443.4 323 66.9
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 2.1e-122 443.0 318 67.0
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 2.1e-122 443.0 318 66.7
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 3.6e-122 442.2 310 69.0
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 7.9e-122 441.0 309 67.6
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.0e-121 440.7 318 66.4
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 1.8e-121 439.9 322 67.4
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 2.3e-121 439.5 323 65.6
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 2.5e-120 436.0 321 66.0
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 7.4e-120 434.5 318 66.4
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 9.7e-120 434.1 319 66.1
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 9.7e-120 434.1 319 66.1
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 9.7e-120 434.1 319 66.1
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.3e-119 433.7 321 66.4
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 1.7e-119 433.3 309 67.3
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 1.7e-119 433.3 326 63.5
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 2.8e-119 432.6 328 64.9
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 2.8e-119 432.6 330 62.7
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 2.8e-119 432.6 346 63.6
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 4.8e-119 431.8 309 66.7
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 8.2e-119 431.0 323 64.7
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 9.1e-118 427.6 316 63.3
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.2e-117 427.2 321 64.8
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 7.7e-117 424.5 314 65.6
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 2.9e-116 422.5 345 61.2
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 2.9e-116 422.5 318 65.7
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 8.5e-116 421.0 288 69.1
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.1e-115 420.6 317 65.0
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 1.9e-115 419.9 323 64.4
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 2.7e-114 416.0 310 61.6
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 1.0e-113 414.1 334 59.9
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 3.3e-112 409.1 318 61.3
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 4.4e-112 408.7 290 68.3
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 5.7e-112 408.3 272 72.4
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.3e-111 407.1 345 59.7
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 1.7e-111 406.8 268 73.9
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 8.2e-111 404.4 319 59.2
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.8e-110 403.3 314 63.4
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 9.1e-110 401.0 318 63.8
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.2e-106 390.6 281 67.6
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 2.3e-105 386.3 321 60.1
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 3.3e-104 382.5 329 59.6
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 8.0e-98 361.3 250 70.0
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 6.8e-97 358.2 254 68.9
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 9.8e-96 354.4 234 74.4
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 4.8e-95 352.1 322 59.3
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 2.9e-92 342.8 317 53.3
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 3.2e-91 339.3 310 54.8
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 9.4e-91 337.8 314 55.1
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 5.2e-89 332.0 325 53.5
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 4.1e-86 322.4 315 51.7
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 4.1e-86 322.4 308 52.6
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 5.6e-83 312.0 318 48.7
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 5.6e-83 312.0 318 48.7
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.1e-82 310.1 316 47.8
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.7e-77 293.1 308 47.7
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 4.6e-77 292.4 222 62.2
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 7.8e-77 291.6 257 54.5
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.6e-76 288.5 317 45.4
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.6e-75 285.4 323 45.5
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.1e-74 283.5 307 45.9
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.8e-73 280.4 316 44.3
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 3.7e-71 272.7 326 42.3
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 5.4e-70 268.9 324 46.3
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 6.8e-65 251.9 312 45.5
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.2e-56 224.6 213 53.1
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 4.3e-35 152.9 160 51.2
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 7.4e-27 125.6 110 56.4
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.3e-23 114.8 119 51.3
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 6.5e-07 59.3 40 65.0


User provided reference genes

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