Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g120210.3 Solanum lycopersicum HOM05D013712 ORTHO05D017124 2.1e-123 445.7 217 100.0
Sopen03g039100 Solanum pennellii HOM05D013712 ORTHO05D017124 8.3e-96 354.0 177 96.6
Sopen03g039080 Solanum pennellii HOM05D013712 ORTHO05D017124 2.9e-80 302.4 151 96.0
Solyc03g120220.1 Solanum lycopersicum HOM05D013712 ORTHO05D017124 1.0e-69 267.3 165 82.4
PGSC0003DMG400044293 Solanum tuberosum HOM05D013712 ORTHO05D017124 2.1e-38 163.3 111 73.0
PGSC0003DMG400005681 Solanum tuberosum HOM05D013712 ORTHO05D017124 6.7e-37 158.3 96 80.2
PGSC0003DMG400037103 Solanum tuberosum HOM05D013712 ORTHO05D017124 2.7e-30 136.3 87 77.0
CAN.G135.80 Capsicum annuum HOM05D013712 ORTHO05D020297 6.7e-21 105.1 121 43.8
PGSC0003DMG400039459 Solanum tuberosum HOM05D013712 ORTHO05D017124 1.5e-20 104.0 69 68.1
Solyc03g063020.1 Solanum lycopersicum HOM05D013712 ORTHO05D017124 4.4e-12 75.9 84 52.4
Hund02999 Selenicereus undatus HOM05D000690 ORTHO05D001022 1.3e-08 64.3 174 28.2
Dinv35870 Davidia involucrata HOM05D000690 ORTHO05D001022 2.9e-08 63.2 213 26.8
Ciclev10008522m.g Citrus clementina HOM05D000690 ORTHO05D001022 5.0e-08 62.4 151 30.5
Actinidia14646 Actinidia chinensis HOM05D000690 ORTHO05D001022 8.5e-08 61.6 126 33.3
TAR624G0598 Trochodendron aralioides HOM05D000690 ORTHO05D001022 8.5e-08 61.6 128 33.6
CSS0030583 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 1.9e-07 60.5 143 30.1
Manes.11G047700 Manihot esculenta HOM05D000690 ORTHO05D001022 2.5e-07 60.1 157 29.9
TAR636G0174 Trochodendron aralioides HOM05D000690 ORTHO05D001022 2.5e-07 60.1 128 32.8
Nn2g11789 Nelumbo nucifera HOM05D000690 ORTHO05D001022 5.5e-07 58.9 127 33.1
Prupe.3G071600 Prunus persica HOM05D000690 ORTHO05D001022 5.5e-07 58.9 135 30.4
arahy.Tifrunner.gnm1.ann1.DC3VUL Arachis hypogaea HOM05D000690 ORTHO05D001022 7.2e-07 58.5 153 32.7
HanXRQChr17g0539521 Helianthus annuus HOM05D000690 ORTHO05D001022 7.2e-07 58.5 108 32.4
Hma1.2p1_0003F.1_g003520 Hydrangea macrophylla HOM05D000690 ORTHO05D001022 7.2e-07 58.5 156 29.5
PSO063G2866 Papaver somniferum HOM05D000690 ORTHO05D001022 1.2e-06 57.8 135 28.9
PSO782G0770 Papaver somniferum HOM05D000690 ORTHO05D001022 1.6e-06 57.4 135 30.4
Medtr1g010140 Medicago truncatula HOM05D000690 ORTHO05D001022 2.1e-06 57.0 112 34.8
HanXRQChr14g0446921 Helianthus annuus HOM05D000690 ORTHO05D001022 3.6e-06 56.2 107 33.6
Nitab4.5_0000250g0040 Nicotiana tabacum HOM05D000690 ORTHO05D001022 4.7e-06 55.8 137 32.1
Lsat_1_v5_gn_3_27741 Lactuca sativa HOM05D000690 ORTHO05D001022 6.1e-06 55.5 105 33.3
Sabra01G0147100 Salix brachista HOM05D000690 ORTHO05D001022 6.1e-06 55.5 186 25.8
CAN.G679.1 Capsicum annuum HOM05D000690 ORTHO05D001022 7.9e-06 55.1 121 30.6
TAR383G0716 Trochodendron aralioides HOM05D000690 ORTHO05D001022 7.9e-06 55.1 151 30.5


User provided reference genes

Program Settings