Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g120160.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 1.4e-43 179.1 82 100.0
Sopen03g039040 Solanum pennellii HOM05D007609 ORTHO05D009539 1.3e-41 172.6 82 97.6
PGSC0003DMG400005604 Solanum tuberosum HOM05D007609 ORTHO05D009539 1.0e-30 136.3 89 78.7
Nitab4.5_0005851g0050 Nicotiana tabacum HOM05D007609 ORTHO05D009539 2.8e-20 101.7 90 55.6
Peaxi162Scf00015g00416 Petunia axillaris HOM05D007609 ORTHO05D009539 4.6e-15 84.3 86 46.5
Nitab4.5_0000351g0200 Nicotiana tabacum HOM05D007609 ORTHO05D009539 7.4e-13 77.0 68 57.4
Solyc03g120155.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 4.8e-12 74.3 78 51.3
Sopen03g039030 Solanum pennellii HOM05D007609 ORTHO05D009539 1.1e-11 73.2 75 53.3
PGSC0003DMG400016536 Solanum tuberosum HOM05D007609 ORTHO05D009539 1.8e-11 72.4 57 57.9
Solyc06g066700.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 4.0e-11 71.2 59 54.2
PGSC0003DMG400005605 Solanum tuberosum HOM05D007609 ORTHO05D009539 5.3e-11 70.9 79 48.1
Sopen06g024990 Solanum pennellii HOM05D007609 ORTHO05D009539 1.5e-10 69.3 59 54.2
Peaxi162Scf00207g00095 Petunia axillaris HOM05D007609 ORTHO05D009539 1.0e-09 66.6 44 59.1
Lsat_1_v5_gn_4_103641 Lactuca sativa HOM05D007609 ORTHO05D009539 1.3e-09 66.2 66 48.5
Dinv38045 Davidia involucrata HOM05D007609 ORTHO05D009539 5.0e-09 64.3 83 42.2
Rhsim08G0221700 Rhododendron simsii HOM05D007609 ORTHO05D009539 8.4e-09 63.5 72 45.8
Migut.D01028 Erythranthe guttata HOM05D007609 ORTHO05D009539 1.1e-08 63.2 34 70.6
Manes.03G019500 Manihot esculenta HOM05D007609 ORTHO05D009539 1.1e-08 63.2 78 44.9
Thecc.09G111700 Theobroma cacao HOM05D007609 ORTHO05D009539 1.1e-08 63.2 77 45.5
Nitab4.5_0003351g0110 Nicotiana tabacum HOM05D007609 ORTHO05D009539 1.4e-08 62.8 64 45.3
ECA232G3029 Erigeron canadensis HOM05D007609 ORTHO05D009539 1.9e-08 62.4 54 48.1
Hma1.2p1_0092F.1_g046650 Hydrangea macrophylla HOM05D007609 ORTHO05D009539 1.9e-08 62.4 42 59.5
Sabra18G0066900 Salix brachista HOM05D007609 ORTHO05D009539 2.5e-08 62.0 73 42.5
Aqoxy7G01699 Aquilegia oxysepala HOM05D007609 ORTHO05D009539 4.2e-08 61.2 38 65.8
Ciclev10010038m.g Citrus clementina HOM05D007609 ORTHO05D009539 5.5e-08 60.8 41 61.0
Gohir.A08G241000 Gossypium hirsutum HOM05D007609 ORTHO05D009539 5.5e-08 60.8 78 44.9
Gohir.D08G261700 Gossypium hirsutum HOM05D007609 ORTHO05D009539 5.5e-08 60.8 78 44.9
Gorai.004G279800 Gossypium raimondii HOM05D007609 ORTHO05D009539 5.5e-08 60.8 78 44.9
Gohir.D07G005100 Gossypium hirsutum HOM05D007609 ORTHO05D009539 9.3e-08 60.1 43 62.8
vmacro18908 Vaccinium macrocarpon HOM05D007609 ORTHO05D009539 9.3e-08 60.1 25 88.0
Cpa.g.sc451.1 Carica papaya HOM05D007609 ORTHO05D009539 1.2e-07 59.7 53 50.9
Gohir.D06G060000 Gossypium hirsutum HOM05D007609 ORTHO05D009539 1.2e-07 59.7 73 42.5
Hma1.2p1_0018F.1_g013450 Hydrangea macrophylla HOM05D007609 ORTHO05D009539 1.2e-07 59.7 43 58.1
Gohir.A06G061700 Gossypium hirsutum HOM05D007609 ORTHO05D009539 1.6e-07 59.3 48 56.2
Gorai.010G069800 Gossypium raimondii HOM05D007609 ORTHO05D009539 1.6e-07 59.3 73 42.5
Gorai.001G004700 Gossypium raimondii HOM05D007609 ORTHO05D009539 2.1e-07 58.9 67 47.8
Lj2g0010717 Lotus japonicus HOM05D007609 ORTHO05D009539 2.7e-07 58.5 74 36.5
DCAR_023052 Daucus carota HOM05D007609 ORTHO05D009539 3.5e-07 58.2 71 47.9
Gohir.A07G006801 Gossypium hirsutum HOM05D007609 ORTHO05D009539 3.5e-07 58.2 25 84.0
CsaV3_7G033200 Cucumis sativus L. HOM05D010933 ORTHO05D013136 4.6e-07 57.8 73 45.2
unitig_899.g14776 Utricularia gibba HOM05D007609 ORTHO05D009539 4.6e-07 57.8 67 46.3
Eucgr.C03849 Eucalyptus grandis HOM05D007609 ORTHO05D009539 6.1e-07 57.4 45 51.1
Potri.006G159300 Populus trichocarpa HOM05D007609 ORTHO05D009539 7.9e-07 57.0 57 49.1
DCAR_028717 Daucus carota HOM05D007609 ORTHO05D009539 1.0e-06 56.6 34 64.7
Glyma.07G087100 Glycine max HOM05D007609 ORTHO05D009539 1.0e-06 56.6 71 35.2
TAR383G0714 Trochodendron aralioides HOM05D007609 ORTHO05D009539 1.0e-06 56.6 25 80.0
CSS0012617 Camellia sinensis var. sinensis HOM05D007609 ORTHO05D009539 1.3e-06 56.2 79 39.2
Lalb_Chr22g0352851 Lupinus albus HOM05D007609 ORTHO05D009539 1.3e-06 56.2 73 35.6
Potri.018G078900 Populus trichocarpa HOM05D007609 ORTHO05D009539 1.3e-06 56.2 40 65.0
Sed0016972 Sechium edule HOM05D007609 ORTHO05D009539 1.3e-06 56.2 65 44.6
Atru.chr7.1339 Acer truncatum HOM05D007609 ORTHO05D009539 1.8e-06 55.8 29 75.9
Phvul.004G162600 Phaseolus vulgaris HOM05D007609 ORTHO05D009539 1.8e-06 55.8 70 42.9
MELO3C024233.2 Cucumis melo HOM05D010933 ORTHO05D013136 2.3e-06 55.5 73 43.8
Peaxi162Scf00560g00120 Petunia axillaris HOM05D007609 ORTHO05D009539 2.3e-06 55.5 58 43.1
Ah.14g081870 Amaranthus hybridus HOM05D007609 ORTHO05D009539 3.0e-06 55.1 35 60.0
AUR62021516 Chenopodium quinoa HOM05D007609 ORTHO05D009539 3.0e-06 55.1 25 80.0
QL05p023464 Quercus lobata HOM05D007609 ORTHO05D009539 3.0e-06 55.1 42 59.5
AUR62011005 Chenopodium quinoa HOM05D007609 ORTHO05D009539 3.9e-06 54.7 25 80.0
AUR62016446 Chenopodium quinoa HOM05D007609 ORTHO05D009539 3.9e-06 54.7 49 51.0
Ca_25525_v3 Cicer arietinum L. HOM05D007609 ORTHO05D009539 3.9e-06 54.7 70 37.1
Manes.16G116800 Manihot esculenta HOM05D007609 ORTHO05D009539 3.9e-06 54.7 41 58.5
QL10p054851 Quercus lobata HOM05D007609 ORTHO05D009539 3.9e-06 54.7 42 57.1
Sc18g0001160 Simmondsia chinensis HOM05D007609 ORTHO05D009539 5.1e-06 54.3 25 76.0
TPR.G35275 Trifolium pratense HOM05D007609 ORTHO05D009539 5.1e-06 54.3 48 45.8
COL.COLO4_34908 Corchorus olitorius HOM05D007609 ORTHO05D009539 8.7e-06 53.5 25 76.0
Lsat_1_v5_gn_5_101501 Lactuca sativa HOM05D007609 ORTHO05D009539 8.7e-06 53.5 42 52.4
TAR624G1182 Trochodendron aralioides HOM05D007609 ORTHO05D009539 8.7e-06 53.5 59 42.4


User provided reference genes

Program Settings