Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g119670.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 3.5e-43 177.9 93 100.0
Nitab4.5_0001599g0070 Nicotiana tabacum HOM05D004837 ORTHO05D005741 4.7e-24 114.4 71 85.9
MSTRG.14939 Avicennia marina HOM05D004837 ORTHO05D005741 5.2e-23 110.9 71 80.3
Peaxi162Scf00013g00943 Petunia axillaris HOM05D004837 ORTHO05D005741 5.2e-23 110.9 71 83.1
Solyc06g069210.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 1.5e-22 109.4 71 81.7
Sopen06g026470 Solanum pennellii HOM05D004837 ORTHO05D005741 1.5e-22 109.4 71 81.7
Migut.M00003 Erythranthe guttata HOM05D004837 ORTHO05D005741 2.0e-22 109.0 71 80.3
Oeu016160.3 Olea europaea HOM05D004837 ORTHO05D005741 3.4e-22 108.2 71 80.3
Cc04_g07300 Coffea canephora HOM05D004837 ORTHO05D005741 9.9e-22 106.7 71 78.9
Nitab4.5_0001432g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 9.9e-22 106.7 71 81.7
PGR083G0937 Punica granatum HOM05D004837 ORTHO05D005741 9.9e-22 106.7 71 76.1
Duzib084G1378 Durio zibethinus HOM05D004837 ORTHO05D005741 1.7e-21 105.9 71 77.5
Gohir.A09G047000 Gossypium hirsutum HOM05D004837 ORTHO05D005741 1.7e-21 105.9 71 77.5
Gohir.D09G047500 Gossypium hirsutum HOM05D004837 ORTHO05D005741 1.7e-21 105.9 71 77.5
Gorai.006G062600 Gossypium raimondii HOM05D004837 ORTHO05D005741 1.7e-21 105.9 71 77.5
Nitab4.5_0008699g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 1.7e-21 105.9 71 81.7
Thecc.03G030500 Theobroma cacao HOM05D004837 ORTHO05D005741 1.7e-21 105.9 71 77.5
CARHR093830 Cardamine hirsuta HOM05D004837 ORTHO05D005741 2.9e-21 105.1 71 77.5
Ca_25454_v3 Cicer arietinum L. HOM05D004837 ORTHO05D005741 2.9e-21 105.1 71 76.1
Lalb_Chr22g0352981 Lupinus albus HOM05D004837 ORTHO05D005741 2.9e-21 105.1 71 76.1
Medtr8g103950 Medicago truncatula HOM05D004837 ORTHO05D005741 2.9e-21 105.1 71 76.1
Actinidia35081 Actinidia chinensis HOM05D004837 ORTHO05D005741 3.7e-21 104.8 71 76.1
Aa31LG8G5290 Aethionema arabicum HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
AL3G31770 Arabidopsis lyrata HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
AT3G18480 Arabidopsis thaliana HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
BcaB06g25891 Brassica carinata HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
BcaC05g28614 Brassica carinata HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
A05p31170 Brassica napus HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
C05p47190 Brassica napus HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
BolC5t33444H Brassica oleracea HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
BraA05t21958Z Brassica rapa HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
Carub.0003s1824 Capsella rubella HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
Ciclev10019149m.g Citrus clementina HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 74.6
Lalb_Chr24g0397611 Lupinus albus HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
Sp3g16570 Schrenkiella parvula HOM05D004837 ORTHO05D005741 4.9e-21 104.4 71 76.1
arahy.Tifrunner.gnm1.ann1.7R0LHH Arachis hypogaea HOM05D004837 ORTHO05D005741 8.4e-21 103.6 71 74.6
Rhsim12G0143900 Rhododendron simsii HOM05D004837 ORTHO05D005741 8.4e-21 103.6 71 74.6
TPR.G21711 Trifolium pratense HOM05D004837 ORTHO05D005741 8.4e-21 103.6 71 74.6
TWI15G0076 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 8.4e-21 103.6 71 76.1
vmacro16451 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 8.4e-21 103.6 71 74.6
vmacro23526 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 8.4e-21 103.6 71 74.6
BcaB04g20769 Brassica carinata HOM05D004837 ORTHO05D005741 1.1e-20 103.2 71 74.6
BcaC09g48805 Brassica carinata HOM05D004837 ORTHO05D005741 1.1e-20 103.2 71 74.6
A01p35930 Brassica napus HOM05D004837 ORTHO05D005741 1.1e-20 103.2 71 74.6
C01p45740 Brassica napus HOM05D004837 ORTHO05D005741 1.1e-20 103.2 71 74.6
BolC1t04537H Brassica oleracea HOM05D004837 ORTHO05D005741 1.1e-20 103.2 71 74.6
BraA01t03672Z Brassica rapa HOM05D004837 ORTHO05D005741 1.1e-20 103.2 71 74.6
COL.COLO4_16258 Corchorus olitorius HOM05D004837 ORTHO05D005741 1.1e-20 103.2 71 74.6
Glyma.07G089600 Glycine max HOM05D004837 ORTHO05D005741 1.1e-20 103.2 71 76.1
Thhalv10020192m.g Eutrema salsugineum HOM05D004837 ORTHO05D005741 1.4e-20 102.8 71 74.6
Lj5C146T15 Lonicera japonica HOM05D004837 ORTHO05D005741 1.4e-20 102.8 71 74.6
Potri.012G061000 Populus trichocarpa HOM05D004837 ORTHO05D005741 1.9e-20 102.4 71 73.2
SGA_v2.0_scaffold10G05151 Striga asiatica HOM05D004837 ORTHO05D005741 1.9e-20 102.4 74 74.3
TWI81G0923 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 1.9e-20 102.4 71 74.6
Atru.chr9.792 Acer truncatum HOM05D004837 ORTHO05D005741 3.2e-20 101.7 71 71.8
arahy.Tifrunner.gnm1.ann1.9R3N8Z Arachis hypogaea HOM05D004837 ORTHO05D005741 3.2e-20 101.7 71 74.6
arahy.Tifrunner.gnm1.ann1.SIGA6A Arachis hypogaea HOM05D004837 ORTHO05D005741 3.2e-20 101.7 71 74.6
CSS0007108 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 3.2e-20 101.7 71 74.6
CSS0011479 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 3.2e-20 101.7 71 74.6
Phvul.004G160100 Phaseolus vulgaris HOM05D004837 ORTHO05D005741 3.2e-20 101.7 71 73.2
QL10p023827 Quercus lobata HOM05D004837 ORTHO05D005741 3.2e-20 101.7 71 76.1
arahy.Tifrunner.gnm1.ann1.71FAZ0 Arachis hypogaea HOM05D004837 ORTHO05D005741 4.1e-20 101.3 71 73.2
CiPaw.15G128500 Carya illinoinensis HOM05D004837 ORTHO05D005741 4.1e-20 101.3 71 74.6
FvH4_5g12492 Fragaria vesca HOM05D004837 ORTHO05D005741 4.1e-20 101.3 71 74.6
FAN04G0597 Fragaria x ananassa HOM05D004837 ORTHO05D005741 4.1e-20 101.3 71 74.6
FAN08G2631 Fragaria x ananassa HOM05D004837 ORTHO05D005741 4.1e-20 101.3 71 74.6
FAN18G2885 Fragaria x ananassa HOM05D004837 ORTHO05D005741 4.1e-20 101.3 71 74.6
Nitab4.5_0010565g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 4.1e-20 101.3 95 64.2
VMungo0464G1696 Vigna mungo HOM05D004837 ORTHO05D005741 4.1e-20 101.3 71 73.2
Lj2g0006103 Lotus japonicus HOM05D004837 ORTHO05D005741 5.4e-20 100.9 71 73.2
Manes.05G138800 Manihot esculenta HOM05D004837 ORTHO05D005741 5.4e-20 100.9 71 71.8
Prupe.8G104400 Prunus persica HOM05D004837 ORTHO05D005741 5.4e-20 100.9 71 74.6
Glyma.09G187100 Glycine max HOM05D004837 ORTHO05D005741 7.1e-20 100.5 71 73.2
Lj4g0025474 Lotus japonicus HOM05D004837 ORTHO05D005741 7.1e-20 100.5 71 73.2
MD10G1081900 Malus domestica HOM05D004837 ORTHO05D005741 7.1e-20 100.5 71 76.1
RcHm_v2.0_Chr7g0184861 Rosa chinensis HOM05D004837 ORTHO05D005741 7.1e-20 100.5 71 74.6
THA.LOC104821845 Tarenaya hassleriana HOM05D004837 ORTHO05D005741 9.2e-20 100.1 71 73.2
GSVIVG01008258001 Vitis vinifera HOM05D004837 ORTHO05D005741 9.2e-20 100.1 71 71.8
TAR629G1790 Trochodendron aralioides HOM05D004837 ORTHO05D005741 1.2e-19 99.8 71 71.8
Manes.01G012900 Manihot esculenta HOM05D004837 ORTHO05D005741 1.6e-19 99.4 71 73.2
unitig_37.g12022 Utricularia gibba HOM05D004837 ORTHO05D005741 2.1e-19 99.0 71 71.8
CSS0025722 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 2.7e-19 98.6 71 73.2
MBI13_g10043_MAGBIO Magnolia biondii HOM05D004837 ORTHO05D005741 2.7e-19 98.6 69 71.0
Cpa.g.sc13.20 Carica papaya HOM05D004837 ORTHO05D005741 3.5e-19 98.2 71 73.2
ClCG03G012520 Citrullus lanatus HOM05D004837 ORTHO05D005741 3.5e-19 98.2 69 75.4
CsaV3_1G043510 Cucumis sativus L. HOM05D004837 ORTHO05D005741 3.5e-19 98.2 69 75.4
FAN18G2415 Fragaria x ananassa HOM05D004837 ORTHO05D005741 3.5e-19 98.2 68 75.0
Sabra12G0044300 Salix brachista HOM05D004837 ORTHO05D005741 4.6e-19 97.8 68 72.1
Sed0018155 Sechium edule HOM05D004837 ORTHO05D005741 4.6e-19 97.8 69 72.5
DCAR_004539 Daucus carota HOM05D004837 ORTHO05D005741 6.0e-19 97.4 71 70.4
Cfa019797 Carpinus fangiana HOM05D004837 ORTHO05D005741 7.8e-19 97.1 71 70.4
Haze_18623 Corylus avellana HOM05D004837 ORTHO05D005741 7.8e-19 97.1 71 70.4
Lsat_1_v5_gn_8_147101 Lactuca sativa HOM05D004837 ORTHO05D005741 1.0e-18 96.7 71 70.4
MELO3C029547.2 Cucumis melo HOM05D004837 ORTHO05D005741 1.3e-18 96.3 68 75.0
ECA233G3214 Erigeron canadensis HOM05D004837 ORTHO05D005741 1.3e-18 96.3 72 72.2
PSO063G6385 Papaver somniferum HOM05D004837 ORTHO05D005741 1.7e-18 95.9 71 67.6
PSO782G0716 Papaver somniferum HOM05D004837 ORTHO05D005741 1.7e-18 95.9 71 67.6
Aqoxy3G03933 Aquilegia oxysepala HOM05D004837 ORTHO05D005741 2.3e-18 95.5 69 69.6
Eucgr.B00707 Eucalyptus grandis HOM05D004837 ORTHO05D005741 2.3e-18 95.5 72 72.2
Nn4g23774 Nelumbo nucifera HOM05D004837 ORTHO05D005741 2.3e-18 95.5 71 67.6
Sc10g0009510 Simmondsia chinensis HOM05D004837 ORTHO05D005741 2.3e-18 95.5 71 66.2
Actinidia31023 Actinidia chinensis HOM05D004837 ORTHO05D005741 3.0e-18 95.1 71 69.0
CANSAT80G2884 Cannabis sativa HOM05D004837 ORTHO05D005741 3.9e-18 94.7 71 69.0
HanXRQChr17g0558331 Helianthus annuus HOM05D004837 ORTHO05D005741 5.1e-18 94.4 72 70.8
EL10Ac5g11426 Beta vulgaris HOM05D004837 ORTHO05D005741 4.3e-17 91.3 71 67.6
HPP92_013216 Vanilla planifolia HOM05D004837 ORTHO05D005741 4.3e-17 91.3 69 65.2
HPP92_013262 Vanilla planifolia HOM05D004837 ORTHO05D005741 4.3e-17 91.3 69 65.2
Ah.02g115350 Amaranthus hybridus HOM05D004837 ORTHO05D005741 5.6e-17 90.9 71 66.2
AUR62025880 Chenopodium quinoa HOM05D004837 ORTHO05D005741 7.3e-17 90.5 71 67.6
AUR62029852 Chenopodium quinoa HOM05D004837 ORTHO05D005741 7.3e-17 90.5 71 67.6
Hund02403 Selenicereus undatus HOM05D004837 ORTHO05D005741 3.6e-16 88.2 71 67.6
Zm00001eb216420 Zea mays HOM05D004837 ORTHO05D005741 1.8e-15 85.9 71 64.8
Os03g0710900 Oryza sativa ssp. japonica HOM05D004837 ORTHO05D005741 2.4e-15 85.5 71 64.8
CDE11G0344 Ceratophyllum demersum HOM05D004837 ORTHO05D005741 5.2e-15 84.3 69 63.8
ATR0021G039 Amborella trichopoda HOM05D004837 ORTHO05D005741 3.4e-14 81.6 71 57.7
Dinv40420 Davidia involucrata HOM05D004837 ORTHO05D005741 1.4e-12 76.3 52 73.1
SMO147G0276 Selaginella moellendorffii HOM05D004837 ORTHO05D005741 1.0e-10 70.1 69 53.6
SEGI_01686 Sequoiadendron giganteum HOM05D004837 ORTHO05D005741 3.0e-10 68.6 69 53.6
Mapoly0091s0053 Marchantia polymorpha HOM05D004837 ORTHO05D005741 1.5e-09 66.2 69 58.0
Pp3c25_10040 Physcomitrium patens HOM05D004837 ORTHO05D005741 2.5e-09 65.5 72 51.4
Pp3c3_5600 Physcomitrium patens HOM05D004837 ORTHO05D005741 9.6e-09 63.5 71 49.3
CBR_g38539 Chara braunii HOM05D004837 ORTHO05D005741 2.6e-06 55.5 74 40.5


User provided reference genes

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