Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 5.7e-192 674.1 345 100.0
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 1.3e-180 636.3 328 98.8
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 1.2e-176 623.2 328 96.6
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 3.3e-171 605.1 328 95.1
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 5.1e-156 554.7 328 89.0
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 2.8e-154 548.9 329 87.2
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 1.9e-147 526.2 330 81.5
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 2.3e-140 502.7 328 78.0
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 6.7e-140 501.1 328 78.4
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 1.9e-139 499.6 328 78.4
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 1.6e-138 496.5 333 77.2
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 2.8e-138 495.7 326 77.3
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 2.4e-137 492.7 333 78.1
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 2.0e-136 489.6 328 74.7
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 2.0e-136 489.6 332 77.1
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 4.5e-136 488.4 328 75.6
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.3e-135 486.9 332 76.5
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 1.7e-135 486.5 334 76.9
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 2.2e-135 486.1 332 76.5
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 6.5e-135 484.6 339 74.3
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 3.2e-134 482.3 338 75.7
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 4.2e-134 481.9 339 74.6
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 9.3e-134 480.7 330 76.4
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.2e-133 480.3 336 76.5
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 1.6e-133 479.9 329 76.0
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 2.7e-133 479.2 330 76.4
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 4.6e-133 478.4 319 77.4
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 1.8e-132 476.5 337 75.4
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 3.9e-132 475.3 335 75.2
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 6.7e-132 474.6 333 76.3
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 1.9e-131 473.0 334 75.1
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 2.5e-131 472.6 333 75.7
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 5.7e-131 471.5 328 74.4
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 1.3e-130 470.3 327 74.3
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 6.3e-130 468.0 331 76.1
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 6.3e-130 468.0 333 75.1
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 1.8e-129 466.5 331 75.2
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 2.4e-129 466.1 330 75.2
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 5.3e-129 464.9 329 74.8
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.2e-128 463.8 326 73.9
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 1.5e-128 463.4 327 74.6
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 2.0e-128 463.0 327 75.2
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 2.0e-128 463.0 329 72.9
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 3.4e-128 462.2 327 74.6
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 1.0e-127 460.7 341 72.1
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 1.7e-127 459.9 329 74.8
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 3.8e-127 458.8 328 73.8
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 1.4e-126 456.8 326 73.0
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.4e-126 456.8 313 74.8
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 1.9e-126 456.4 330 71.8
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 4.2e-126 455.3 348 70.1
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 5.5e-126 454.9 326 73.0
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 1.2e-125 453.8 333 71.8
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 7.9e-125 451.1 326 72.4
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 1.0e-124 450.7 328 72.6
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 3.0e-124 449.1 330 71.8
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 8.7e-124 447.6 331 72.2
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 1.9e-123 446.4 331 70.7
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 7.4e-123 444.5 326 71.2
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 3.7e-122 442.2 332 71.7
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 1.1e-121 440.7 305 75.4
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 1.8e-121 439.9 299 75.9
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 9.1e-121 437.6 327 71.6
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 1.5e-120 436.8 328 71.0
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 2.0e-120 436.4 328 71.6
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 2.0e-120 436.4 321 72.0
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 3.8e-119 432.2 274 79.6
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 3.2e-118 429.1 285 77.5
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 5.5e-118 428.3 334 70.1
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 2.7e-117 426.0 285 77.5
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.4e-116 423.7 301 74.1
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 2.3e-116 422.9 303 72.3
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 3.0e-116 422.5 279 76.7
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 3.0e-116 422.5 291 74.9
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 3.0e-116 422.5 279 77.1
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 3.0e-116 422.5 326 69.3
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 3.9e-116 422.2 279 77.1
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 3.9e-116 422.2 326 69.3
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 6.7e-116 421.4 297 74.1
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 8.8e-116 421.0 289 75.8
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 8.8e-116 421.0 279 76.3
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 8.8e-116 421.0 279 76.3
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 8.8e-116 421.0 330 69.1
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.5e-115 420.2 326 68.7
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 2.0e-115 419.9 328 68.6
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.6e-115 419.5 260 81.5
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 8.2e-114 414.5 331 68.9
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 7.7e-112 407.9 326 67.5
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 2.9e-111 406.0 298 71.5
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 5.0e-111 405.2 323 67.8
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 6.5e-111 404.8 233 86.7
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 7.9e-109 397.9 239 82.4
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 7.9e-109 397.9 239 82.4
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.4e-108 397.1 329 63.8
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.1e-107 394.0 233 82.4
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.8e-105 386.7 316 67.4
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 1.2e-101 374.0 242 76.0
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.2e-101 374.0 308 64.9
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 1.8e-100 370.2 348 58.3
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 1.4e-97 360.5 274 65.7
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 1.0e-95 354.4 274 65.0
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 3.2e-94 349.4 327 58.4
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 5.5e-94 348.6 211 82.9
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 6.3e-90 335.1 266 63.2
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 1.8e-89 333.6 281 65.8
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 3.8e-87 325.9 267 61.0
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 6.3e-82 308.5 251 62.2
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 1.5e-78 297.4 285 55.4
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 5.4e-73 278.9 231 67.1
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 7.8e-72 275.0 311 52.1
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 1.1e-68 264.6 201 71.6
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 3.6e-61 239.6 241 57.3
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 1.4e-60 237.7 153 78.4
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 4.4e-59 232.6 231 55.8
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 3.3e-38 163.3 103 70.9
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 6.0e-24 115.9 68 82.4
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 6.5e-18 95.9 84 56.0
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.0e-10 72.0 61 60.7
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 1.4e-07 61.6 64 57.8
Lsat_1_v5_gn_6_13761 Lactuca sativa HOM05D000295 ORTHO05D000188 4.3e-06 56.6 119 34.5


User provided reference genes

Program Settings