Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g115280.1 Solanum lycopersicum HOM05D001894 ORTHO05D001752 2.2e-47 191.8 88 100.0
Sopen03g034290 Solanum pennellii HOM05D001894 ORTHO05D001752 1.5e-16 89.4 61 70.5
Peaxi162Scf00201g00131 Petunia axillaris HOM05D001894 ORTHO05D001752 3.4e-16 88.2 61 68.9
Nitab4.5_0001410g0080 Nicotiana tabacum HOM05D001894 ORTHO05D001752 4.5e-16 87.8 61 68.9
Nitab4.5_0001485g0190 Nicotiana tabacum HOM05D001894 ORTHO05D001752 4.5e-16 87.8 61 70.5
Solyc03g115250.4 Solanum lycopersicum HOM05D001894 ORTHO05D001752 4.5e-16 87.8 61 68.9
Oeu001012.1 Olea europaea HOM05D001894 ORTHO05D001752 3.9e-12 74.7 59 67.8
Peaxi162Scf00702g00418 Petunia axillaris HOM05D001894 ORTHO05D001752 5.1e-12 74.3 57 64.9
Nitab4.5_0011867g0010 Nicotiana tabacum HOM05D001894 ORTHO05D001752 6.7e-12 73.9 57 64.9
Nitab4.5_0000361g0020 Nicotiana tabacum HOM05D001894 ORTHO05D001752 8.8e-12 73.6 58 62.1
Nitab4.5_0001688g0110 Nicotiana tabacum HOM05D001894 ORTHO05D001752 8.8e-12 73.6 78 53.8
Duzib205G0371 Durio zibethinus HOM05D001894 ORTHO05D001752 1.5e-11 72.8 64 60.9
Oeu008254.3 Olea europaea HOM05D001894 ORTHO05D001752 3.3e-11 71.6 60 63.3
Peaxi162Scf00013g00631 Petunia axillaris HOM05D001894 ORTHO05D001752 4.3e-11 71.2 62 58.1
CAN.G4.20 Capsicum annuum HOM05D001894 ORTHO05D001752 5.7e-11 70.9 57 61.4
Hma1.2p1_0060F.1_g033210 Hydrangea macrophylla HOM05D001894 ORTHO05D001752 9.7e-11 70.1 60 60.0
Actinidia04837 Actinidia chinensis HOM05D001894 ORTHO05D001752 1.3e-10 69.7 60 56.7
Haze_07702 Corylus avellana HOM05D001894 ORTHO05D001752 1.7e-10 69.3 64 57.8
Dinv10523 Davidia involucrata HOM05D001894 ORTHO05D001752 1.7e-10 69.3 64 57.8
Gohir.D03G096000 Gossypium hirsutum HOM05D001894 ORTHO05D001752 1.7e-10 69.3 59 57.6
Gorai.003G100700 Gossypium raimondii HOM05D001894 ORTHO05D001752 1.7e-10 69.3 59 57.6
Potri.015G056200 Populus trichocarpa HOM05D001894 ORTHO05D001752 2.2e-10 68.9 60 60.0
Thecc.03G099600 Theobroma cacao HOM05D001894 ORTHO05D001752 2.8e-10 68.6 60 60.0
Cpa.g.sc94.26 Carica papaya HOM05D001894 ORTHO05D001752 3.7e-10 68.2 59 55.9
Atru.chr9.413 Acer truncatum HOM05D001894 ORTHO05D001752 4.8e-10 67.8 60 61.7
Duzib084G0585 Durio zibethinus HOM05D001894 ORTHO05D001752 4.8e-10 67.8 60 60.0
Gohir.A09G243300 Gossypium hirsutum HOM05D001894 ORTHO05D001752 4.8e-10 67.8 60 58.3
Gohir.D09G244000 Gossypium hirsutum HOM05D001894 ORTHO05D001752 4.8e-10 67.8 60 58.3
Gorai.006G268000 Gossypium raimondii HOM05D001894 ORTHO05D001752 4.8e-10 67.8 60 58.3
MSTRG.4457 Avicennia marina HOM05D001894 ORTHO05D001752 6.3e-10 67.4 58 56.9
Cfa019314 Carpinus fangiana HOM05D001894 ORTHO05D001752 6.3e-10 67.4 60 60.0
COL.COLO4_37591 Corchorus olitorius HOM05D001894 ORTHO05D001752 6.3e-10 67.4 60 60.0
Ca_21784_v3 Cicer arietinum L. HOM05D001894 ORTHO05D001752 1.4e-09 66.2 60 55.0
Manes.06G085900 Manihot esculenta HOM05D001894 ORTHO05D001752 1.4e-09 66.2 59 59.3
arahy.Tifrunner.gnm1.ann1.URK1K5 Arachis hypogaea HOM05D001894 ORTHO05D001752 1.8e-09 65.9 60 56.7
arahy.Tifrunner.gnm1.ann1.ZWJH5S Arachis hypogaea HOM05D001894 ORTHO05D001752 1.8e-09 65.9 60 56.7
Potri.012G061400 Populus trichocarpa HOM05D001894 ORTHO05D001752 1.8e-09 65.9 59 55.9
Potri.012G066600 Populus trichocarpa HOM05D001894 ORTHO05D001752 1.8e-09 65.9 60 56.7
VMungo1215G1196 Vigna mungo HOM05D001894 ORTHO05D001752 2.4e-09 65.5 59 50.8
SalBow7G0716 Salvia bowleyana HOM05D001894 ORTHO05D001752 3.1e-09 65.1 59 55.9
Sabra15G0081400 Salix brachista HOM05D001894 ORTHO05D001752 4.1e-09 64.7 59 54.2
CANSAT80G0157 Cannabis sativa HOM05D001894 ORTHO05D001752 5.3e-09 64.3 60 56.7
Glyma.05G022300 Glycine max HOM05D001894 ORTHO05D001752 5.3e-09 64.3 60 50.0
Glyma.17G077400 Glycine max HOM05D001894 ORTHO05D001752 6.9e-09 63.9 59 50.8
Potri.015G056400 Populus trichocarpa HOM05D001894 ORTHO05D001752 6.9e-09 63.9 60 56.7
Cc04_g13200 Coffea canephora HOM05D001894 ORTHO05D001752 9.1e-09 63.5 58 53.4
Duzib068G1120 Durio zibethinus HOM05D001894 ORTHO05D001752 9.1e-09 63.5 63 54.0
Lalb_Chr13g0302921 Lupinus albus HOM05D001894 ORTHO05D001752 9.1e-09 63.5 59 54.2
QL10p019165 Quercus lobata HOM05D001894 ORTHO05D001752 9.1e-09 63.5 60 60.0
Lalb_Chr12g0197101 Lupinus albus HOM05D001894 ORTHO05D001752 1.2e-08 63.2 60 55.0
Solyc12g038490.2 Solanum lycopersicum HOM05D001894 ORTHO05D001752 1.2e-08 63.2 57 57.9
Sopen12g018730 Solanum pennellii HOM05D001894 ORTHO05D001752 1.2e-08 63.2 57 57.9
MSTRG.22980 Avicennia marina HOM05D001894 ORTHO05D001752 1.5e-08 62.8 58 55.2
CiPaw.12G007900 Carya illinoinensis HOM05D001894 ORTHO05D001752 1.5e-08 62.8 60 58.3
HanXRQChr14g0432181 Helianthus annuus HOM05D001894 ORTHO05D001752 1.5e-08 62.8 59 49.2
PGR044G2115 Punica granatum HOM05D001894 ORTHO05D001752 2.0e-08 62.4 59 50.8
Sabra12G0048500 Salix brachista HOM05D001894 ORTHO05D001752 2.0e-08 62.4 60 53.3
SGA_v2.0_scaffold7G04035 Striga asiatica HOM05D001894 ORTHO05D001752 2.0e-08 62.4 58 51.7
TPR.G2049 Trifolium pratense HOM05D001894 ORTHO05D001752 2.0e-08 62.4 60 51.7
Ciclev10018461m.g Citrus clementina HOM05D001894 ORTHO05D001752 2.6e-08 62.0 59 55.9
Gohir.A03G069500 Gossypium hirsutum HOM05D001894 ORTHO05D001752 2.6e-08 62.0 59 52.5
Sabra15G0081600 Salix brachista HOM05D001894 ORTHO05D001752 2.6e-08 62.0 60 53.3
Dinv17397 Davidia involucrata HOM05D001894 ORTHO05D001752 3.4e-08 61.6 60 55.0
CiPaw.11G051700 Carya illinoinensis HOM05D001894 ORTHO05D001752 4.5e-08 61.2 60 55.0
GSVIVG01007885001 Vitis vinifera HOM05D001894 ORTHO05D001752 5.9e-08 60.8 60 55.0
MELO3C002018.2 Cucumis melo HOM05D001894 ORTHO05D001752 7.7e-08 60.5 60 56.7
CSS0004205 Camellia sinensis var. sinensis HOM05D001894 ORTHO05D001752 1.0e-07 60.1 63 52.4
ClCG04G011900 Citrullus lanatus HOM05D001894 ORTHO05D001752 1.0e-07 60.1 60 56.7
CsaV3_1G005880 Cucumis sativus L. HOM05D001894 ORTHO05D002926 1.0e-07 60.1 60 56.7
MD06G1200700 Malus domestica HOM05D001894 ORTHO05D001752 1.0e-07 60.1 59 52.5
Lalb_Chr07g0178281 Lupinus albus HOM05D001894 ORTHO05D001752 1.3e-07 59.7 60 51.7
Manes.14G084600 Manihot esculenta HOM05D001894 ORTHO05D001752 1.3e-07 59.7 59 52.5
Rhsim12G0151500 Rhododendron simsii HOM05D001894 ORTHO05D001752 1.3e-07 59.7 61 50.8
Eucgr.K02519 Eucalyptus grandis HOM05D001894 ORTHO05D001752 1.7e-07 59.3 60 53.3
AUR62008512 Chenopodium quinoa HOM05D001894 ORTHO05D001752 2.2e-07 58.9 57 52.6
FvH4_5g14040 Fragaria vesca HOM05D001894 ORTHO05D001752 2.2e-07 58.9 60 51.7
FAN08G3261 Fragaria x ananassa HOM05D001894 ORTHO05D001752 2.2e-07 58.9 60 51.7
FAN13G2812 Fragaria x ananassa HOM05D001894 ORTHO05D001752 2.2e-07 58.9 60 51.7
FAN18G3960 Fragaria x ananassa HOM05D001894 ORTHO05D001752 2.2e-07 58.9 60 51.7
Glyma.04G163600 Glycine max HOM05D001894 ORTHO05D001752 2.2e-07 58.9 60 50.0
Nn3g17426 Nelumbo nucifera HOM05D001894 ORTHO05D001752 2.2e-07 58.9 56 53.6
Phvul.009G193100 Phaseolus vulgaris HOM05D001894 ORTHO05D001752 2.2e-07 58.9 60 50.0
Psat4g047960 Pisum sativum HOM05D001894 ORTHO05D001752 2.2e-07 58.9 60 50.0
Prupe.5G203400 Prunus persica HOM05D001894 ORTHO05D001752 2.2e-07 58.9 60 53.3
SGA_v2.0_scaffold114G31926 Striga asiatica HOM05D001894 ORTHO05D001752 2.2e-07 58.9 60 50.0
TAR371G0849 Trochodendron aralioides HOM05D001894 ORTHO05D001752 2.2e-07 58.9 60 50.0
VMungo1309G0348 Vigna mungo HOM05D001894 ORTHO05D001752 2.2e-07 58.9 60 50.0
Actinidia18131 Actinidia chinensis HOM05D001894 ORTHO05D001752 2.9e-07 58.5 60 51.7
Ah.11g047940 Amaranthus hybridus HOM05D001894 ORTHO05D001752 2.9e-07 58.5 60 50.0
AUR62021578 Chenopodium quinoa HOM05D001894 ORTHO05D001752 2.9e-07 58.5 57 52.6
Glyma.16G016500 Glycine max HOM05D001894 ORTHO05D001752 2.9e-07 58.5 65 47.7
Sed0001778 Sechium edule HOM05D001894 ORTHO05D001752 2.9e-07 58.5 61 54.1
TAR629G1115 Trochodendron aralioides HOM05D001894 ORTHO05D001752 2.9e-07 58.5 56 51.8
CSS0001605 Camellia sinensis var. sinensis HOM05D001894 ORTHO05D001752 3.8e-07 58.2 60 50.0
CAN.G479.18 Capsicum annuum HOM05D001894 ORTHO05D001752 3.8e-07 58.2 57 54.4
Lj4g0026422 Lotus japonicus HOM05D001894 ORTHO05D001752 3.8e-07 58.2 61 52.5
Oeu061152.1 Olea europaea HOM05D001894 ORTHO05D001752 3.8e-07 58.2 59 52.5
HanXRQChr05g0157261 Helianthus annuus HOM05D001894 ORTHO05D001752 6.5e-07 57.4 59 49.2
Lj1g0009803 Lotus japonicus HOM05D001894 ORTHO05D001752 6.5e-07 57.4 59 45.8
Nn4g23398 Nelumbo nucifera HOM05D001894 ORTHO05D001752 6.5e-07 57.4 56 51.8
vmacro17598 Vaccinium macrocarpon HOM05D001894 ORTHO05D001752 6.5e-07 57.4 60 45.0
Manes.02G054400 Manihot esculenta HOM05D001894 ORTHO05D001752 8.5e-07 57.0 54 59.3
Phvul.003G185600 Phaseolus vulgaris HOM05D001894 ORTHO05D001752 8.5e-07 57.0 59 50.8
RcHm_v2.0_Chr7g0182781 Rosa chinensis HOM05D001894 ORTHO05D001752 8.5e-07 57.0 60 50.0
EL10Ac5g11114 Beta vulgaris HOM05D001894 ORTHO05D001752 1.1e-06 56.6 57 52.6
Migut.I00326 Erythranthe guttata HOM05D001894 ORTHO05D001752 1.1e-06 56.6 58 53.4
Sed0020614 Sechium edule HOM05D001894 ORTHO05D001752 1.4e-06 56.2 60 53.3
TAR622G0732 Trochodendron aralioides HOM05D001894 ORTHO05D001752 1.9e-06 55.8 56 51.8
Rhsim08G0147300 Rhododendron simsii HOM05D001894 ORTHO05D001752 2.5e-06 55.5 60 43.3
Gohir.D12G184600 Gossypium hirsutum HOM05D001894 ORTHO05D001752 3.2e-06 55.1 60 46.7
Gorai.008G198000 Gossypium raimondii HOM05D001894 ORTHO05D001752 3.2e-06 55.1 60 46.7
Ah.10g032120 Amaranthus hybridus HOM05D001894 ORTHO05D001752 4.2e-06 54.7 57 43.9
Duzib147G1389 Durio zibethinus HOM05D001894 ORTHO05D001752 4.2e-06 54.7 55 50.9
Duzib264G0454 Durio zibethinus HOM05D001894 ORTHO05D001752 4.2e-06 54.7 55 50.9
Eucgr.K02518 Eucalyptus grandis HOM05D001894 ORTHO05D001752 4.2e-06 54.7 59 50.8
Gohir.A03G085001 Gossypium hirsutum HOM05D001894 ORTHO05D001752 4.2e-06 54.7 60 46.7
Gohir.A05G349000 Gossypium hirsutum HOM05D001894 ORTHO05D001752 4.2e-06 54.7 60 46.7
Gohir.A12G181800 Gossypium hirsutum HOM05D001894 ORTHO05D001752 4.2e-06 54.7 60 46.7
Gohir.D05G105300 Gossypium hirsutum HOM05D001894 ORTHO05D001752 4.2e-06 54.7 60 46.7
Lj5C104T5 Lonicera japonica HOM05D001894 ORTHO05D001752 5.5e-06 54.3 59 44.1
Ca_26551_v3 Cicer arietinum L. HOM05D001894 ORTHO05D001752 7.2e-06 53.9 60 48.3
Dinv34949 Davidia involucrata HOM05D001894 ORTHO05D001752 7.2e-06 53.9 56 51.8
Lj4A118T61 Lonicera japonica HOM05D001894 ORTHO05D001752 7.2e-06 53.9 56 51.8
DCAR_014034 Daucus carota HOM05D001894 ORTHO05D001752 9.4e-06 53.5 59 45.8
Hund09881 Selenicereus undatus HOM05D001894 ORTHO05D001752 9.4e-06 53.5 57 49.1
Thecc.04G094300 Theobroma cacao HOM05D001894 ORTHO05D001752 9.4e-06 53.5 55 50.9


User provided reference genes

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