Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 6.5e-131 470.7 231 100.0
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 4.2e-114 414.8 216 95.4
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 4.7e-113 411.4 219 93.6
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 4.1e-101 371.7 227 85.0
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.3e-86 323.6 221 76.0
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 8.6e-83 310.8 223 74.0
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 4.0e-80 302.0 192 78.6
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 2.2e-78 296.2 229 66.4
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 7.0e-77 291.2 208 73.1
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 2.7e-76 289.3 225 65.8
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 5.0e-75 285.0 222 69.8
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 5.0e-75 285.0 221 68.3
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 1.1e-74 283.9 230 65.2
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 1.5e-74 283.5 222 64.0
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.9e-74 283.1 227 67.8
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 1.6e-73 280.0 222 66.7
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 1.6e-73 280.0 219 65.3
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 3.6e-73 278.9 225 65.3
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 3.6e-73 278.9 220 65.5
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 4.7e-73 278.5 224 64.3
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 4.7e-73 278.5 228 63.6
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 1.0e-72 277.3 226 64.6
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 1.4e-72 276.9 224 64.7
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 1.4e-72 276.9 211 66.4
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 4.0e-72 275.4 206 68.0
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 6.8e-72 274.6 220 64.5
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.2e-71 273.9 247 59.1
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 1.2e-71 273.9 195 72.8
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 2.6e-71 272.7 209 66.5
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 2.6e-71 272.7 208 66.8
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 7.5e-71 271.2 210 66.7
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 7.5e-71 271.2 220 65.5
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 7.5e-71 271.2 219 64.8
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 1.3e-70 270.4 192 71.9
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 1.7e-70 270.0 234 62.4
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 1.7e-70 270.0 213 65.3
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 1.7e-70 270.0 171 74.9
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 1.7e-70 270.0 225 64.0
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 2.9e-70 269.2 191 70.7
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 2.9e-70 269.2 222 63.5
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 6.4e-70 268.1 214 68.2
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 6.4e-70 268.1 229 65.1
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 8.3e-70 267.7 234 62.0
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 1.1e-69 267.3 225 61.3
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 1.9e-69 266.5 207 66.7
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 2.4e-69 266.2 234 61.1
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 5.4e-69 265.0 220 62.7
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 5.4e-69 265.0 204 64.2
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 5.4e-69 265.0 190 69.5
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 5.4e-69 265.0 199 66.8
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 1.6e-68 263.5 223 61.4
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 3.5e-68 262.3 242 59.9
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 3.5e-68 262.3 224 59.4
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 1.0e-67 260.8 188 67.6
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 1.7e-67 260.0 176 69.9
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 2.3e-67 259.6 224 62.5
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 6.6e-67 258.1 224 60.3
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 6.6e-67 258.1 195 65.6
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 9.5e-66 254.2 212 62.7
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 1.2e-65 253.8 229 59.8
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 1.6e-65 253.4 223 58.7
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 3.6e-65 252.3 165 73.3
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 3.6e-65 252.3 165 73.3
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.7e-65 251.9 242 56.6
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 6.2e-65 251.5 190 67.4
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 6.2e-65 251.5 222 60.8
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 8.0e-65 251.1 203 63.5
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 8.0e-65 251.1 213 59.2
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 1.4e-64 250.4 203 64.0
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 2.3e-64 249.6 161 71.4
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 4.0e-64 248.8 210 59.5
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 5.2e-64 248.4 210 61.9
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 5.2e-64 248.4 209 60.8
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 1.5e-63 246.9 186 66.7
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 1.5e-63 246.9 174 68.4
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 1.5e-63 246.9 214 59.8
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 3.4e-63 245.7 167 71.3
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 4.4e-63 245.4 218 60.6
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 5.8e-63 245.0 182 67.6
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 7.5e-63 244.6 179 67.6
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 1.7e-62 243.4 221 59.3
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 3.7e-62 242.3 186 65.6
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 3.7e-62 242.3 186 65.6
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 6.4e-62 241.5 165 69.7
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 8.3e-62 241.1 185 65.4
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 1.1e-61 240.7 168 68.5
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 1.4e-61 240.4 175 64.6
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 2.7e-60 236.1 166 70.5
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 6.0e-60 235.0 175 66.3
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 6.0e-60 235.0 197 62.9
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 1.0e-59 234.2 204 61.3
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 2.3e-59 233.0 175 65.7
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 5.1e-59 231.9 175 65.1
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 3.6e-57 225.7 187 60.4
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 4.7e-57 225.3 125 82.4
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 1.4e-56 223.8 168 63.7
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 6.8e-56 221.5 149 69.1
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.0e-55 219.9 235 52.8
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 3.4e-55 219.2 130 77.7
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 8.3e-54 214.5 161 60.9
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 3.9e-51 205.7 139 76.3
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 1.2e-49 200.7 175 62.9
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 2.6e-47 193.0 206 52.9
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 1.3e-46 190.7 143 57.3
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 4.2e-45 185.7 241 42.3
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 1.6e-44 183.7 127 70.1
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 1.0e-43 181.0 188 54.8
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 3.0e-43 179.5 118 67.8
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 7.6e-39 164.9 157 58.0
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 7.6e-39 164.9 157 58.0
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 2.2e-38 163.3 93 87.1
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 1.1e-32 144.4 134 50.0
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 3.1e-32 142.9 93 73.1
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 5.3e-32 142.1 137 57.7
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 7.6e-31 138.3 128 48.4
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 9.9e-31 137.9 136 48.5
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 1.3e-30 137.5 80 80.0
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 2.7e-28 129.8 139 54.7
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 3.0e-27 126.3 131 53.4
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 3.1e-24 116.3 135 48.9
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 6.4e-22 108.6 132 47.7
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 7.4e-18 95.1 114 36.0
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 4.1e-08 62.8 168 28.0
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 1.2e-07 61.2 38 71.1


User provided reference genes

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