Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g113670.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 1.8e-31 138.7 70 100.0
Peaxi162Scf00017g02235 Petunia axillaris HOM05D007939 ORTHO05D010027 2.8e-21 104.8 60 85.0
CAN.G853.35 Capsicum annuum HOM05D007939 ORTHO05D010027 1.8e-20 102.1 60 81.7
Nitab4.5_0000642g0220 Nicotiana tabacum HOM05D007939 ORTHO05D010027 5.5e-17 90.5 48 89.6
Nitab4.5_0002875g0050 Nicotiana tabacum HOM05D007939 ORTHO05D010027 8.0e-16 86.7 45 91.1
MD14G1189000 Malus domestica HOM05D007939 ORTHO05D010027 2.3e-15 85.1 56 67.9
Cfa019042 Carpinus fangiana HOM05D007939 ORTHO05D010027 3.0e-15 84.7 51 72.5
Prupe.5G181400 Prunus persica HOM05D007939 ORTHO05D010027 6.7e-15 83.6 50 72.0
Thhalv10010893m.g Eutrema salsugineum HOM05D007939 ORTHO05D010027 2.6e-14 81.6 50 72.0
CiPaw.11G033900 Carya illinoinensis HOM05D007939 ORTHO05D010027 3.3e-14 81.3 51 66.7
Potri.012G074300 Populus trichocarpa HOM05D007939 ORTHO05D010027 3.3e-14 81.3 50 70.0
Cc04_g16150 Coffea canephora HOM05D007939 ORTHO05D010027 4.4e-14 80.9 54 66.7
DCAR_021553 Daucus carota HOM05D007939 ORTHO05D010027 4.4e-14 80.9 51 70.6
Nn4g22962 Nelumbo nucifera HOM05D007939 ORTHO05D010027 4.4e-14 80.9 50 70.0
Rhsim08G0164200 Rhododendron simsii HOM05D007939 ORTHO05D010027 4.4e-14 80.9 45 82.2
CSS0025662 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 5.7e-14 80.5 45 82.2
CARHR156540 Cardamine hirsuta HOM05D007939 ORTHO05D010027 5.7e-14 80.5 50 72.0
Ciclev10023252m.g Citrus clementina HOM05D007939 ORTHO05D010027 5.7e-14 80.5 50 70.0
Sed0024093 Sechium edule HOM05D007939 ORTHO05D010027 7.4e-14 80.1 50 72.0
BcaB01g00871 Brassica carinata HOM05D007939 ORTHO05D010027 1.3e-13 79.3 50 68.0
C03p72070 Brassica napus HOM05D007939 ORTHO05D010027 1.3e-13 79.3 50 68.0
BolC3t19505H Brassica oleracea HOM05D007939 ORTHO05D010027 1.3e-13 79.3 50 68.0
BraA06t25058Z Brassica rapa HOM05D007939 ORTHO05D010027 1.3e-13 79.3 50 68.0
CSS0005245 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 1.7e-13 79.0 45 80.0
Nn3g17057 Nelumbo nucifera HOM05D007939 ORTHO05D010027 2.8e-13 78.2 50 66.0
Sp5g14120 Schrenkiella parvula HOM05D007939 ORTHO05D010027 3.7e-13 77.8 50 68.0
CsaV3_1G008140 Cucumis sativus L. HOM05D007939 ORTHO05D010027 4.8e-13 77.4 50 68.0
Gohir.A12G276700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 4.8e-13 77.4 51 66.7
Gohir.D12G277700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 4.8e-13 77.4 51 66.7
Gorai.008G298400 Gossypium raimondii HOM05D007939 ORTHO05D010027 4.8e-13 77.4 51 66.7
Rhsim12G0160700 Rhododendron simsii HOM05D007939 ORTHO05D010027 4.8e-13 77.4 45 77.8
Manes.14G071800 Manihot esculenta HOM05D007939 ORTHO05D010027 6.3e-13 77.0 50 68.0
AL5G27140 Arabidopsis lyrata HOM05D007939 ORTHO05D010027 8.2e-13 76.6 50 66.0
Sabra12G0052700 Salix brachista HOM05D007939 ORTHO05D010027 8.2e-13 76.6 45 75.6
Haze_07419 Corylus avellana HOM05D007939 ORTHO05D010027 1.1e-12 76.3 45 75.6
Carub.0005s1396 Capsella rubella HOM05D007939 ORTHO05D010027 1.4e-12 75.9 50 70.0
Lj9A455T57 Lonicera japonica HOM05D007939 ORTHO05D010027 1.4e-12 75.9 50 70.0
BcaB02g10687 Brassica carinata HOM05D007939 ORTHO05D010027 1.8e-12 75.5 45 73.3
BcaC01g01771 Brassica carinata HOM05D007939 ORTHO05D010027 1.8e-12 75.5 47 68.1
MELO3C002231.2 Cucumis melo HOM05D007939 ORTHO05D010027 1.8e-12 75.5 47 72.3
SalBow3G2524 Salvia bowleyana HOM05D007939 ORTHO05D010027 1.8e-12 75.5 59 61.0
ClCG01G014170 Citrullus lanatus HOM05D007939 ORTHO05D010027 2.4e-12 75.1 45 75.6
Solyc06g071260.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 3.1e-12 74.7 60 65.0
Oeu041591.1 Olea europaea HOM05D007939 ORTHO05D010027 4.1e-12 74.3 51 66.7
RcHm_v2.0_Chr7g0179931 Rosa chinensis HOM05D007939 ORTHO05D010027 5.3e-12 73.9 50 62.0
Sabra15G0093500 Salix brachista HOM05D007939 ORTHO05D010027 5.3e-12 73.9 45 73.3
Lsat_1_v5_gn_4_74421 Lactuca sativa HOM05D007939 ORTHO05D010027 7.0e-12 73.6 50 66.0
PGSC0003DMG400033058 Solanum tuberosum HOM05D007939 ORTHO05D010027 7.0e-12 73.6 60 63.3
Thecc.03G001700 Theobroma cacao HOM05D007939 ORTHO05D010027 7.0e-12 73.6 47 68.1
HanXRQChr09g0271581 Helianthus annuus HOM05D007939 ORTHO05D010027 1.6e-11 72.4 51 62.7
Glyma.05G032500 Glycine max HOM05D007939 ORTHO05D010027 2.0e-11 72.0 50 62.0
Hund02701 Selenicereus undatus HOM05D007939 ORTHO05D010027 2.0e-11 72.0 50 64.0
Aa31LG4G16500 Aethionema arabicum HOM05D007939 ORTHO05D010027 3.5e-11 71.2 45 66.7
SGA_v2.0_scaffold7G04104 Striga asiatica HOM05D007939 ORTHO05D010027 5.9e-11 70.5 42 73.8
C03p66950 Brassica napus HOM05D007939 ORTHO05D010027 7.7e-11 70.1 45 68.9
BolC3t18968H Brassica oleracea HOM05D007939 ORTHO05D010027 7.7e-11 70.1 45 68.9
COL.COLO4_05795 Corchorus olitorius HOM05D007939 ORTHO05D010027 7.7e-11 70.1 45 66.7
Lalb_Chr13g0298021 Lupinus albus HOM05D007939 ORTHO05D010027 7.7e-11 70.1 50 62.0
Oeu046758.2 Olea europaea HOM05D007939 ORTHO05D010027 1.0e-10 69.7 45 68.9
Migut.D01894 Erythranthe guttata HOM05D007939 ORTHO05D010027 1.7e-10 68.9 51 62.7
Lj4g0008013 Lotus japonicus HOM05D007939 ORTHO05D010027 1.7e-10 68.9 50 58.0
Atru.chr9.2381 Acer truncatum HOM05D007939 ORTHO05D010027 2.9e-10 68.2 49 61.2
PSO591G0029 Papaver somniferum HOM05D007939 ORTHO05D010027 2.9e-10 68.2 48 66.7
Phvul.003G196000 Phaseolus vulgaris HOM05D007939 ORTHO05D010027 6.5e-10 67.0 50 58.0
EL10Ac5g10844 Beta vulgaris HOM05D007939 ORTHO05D010027 1.5e-09 65.9 45 66.7
EL10Ac5g11334 Beta vulgaris HOM05D007939 ORTHO05D010027 2.5e-09 65.1 47 61.7
Nitab4.5_0002101g0080 Nicotiana tabacum HOM05D007939 ORTHO05D010027 2.5e-09 65.1 57 56.1
Nitab4.5_0000003g0340 Nicotiana tabacum HOM05D007939 ORTHO05D010027 3.2e-09 64.7 49 65.3
CAN.G628.63 Capsicum annuum HOM05D007939 ORTHO05D010027 4.2e-09 64.3 45 68.9
Os03g0824500 Oryza sativa ssp. japonica HOM05D007939 ORTHO05D010027 9.4e-09 63.2 42 69.0
EL10Ac5g10864 Beta vulgaris HOM05D007939 ORTHO05D010027 1.2e-08 62.8 45 62.2
QL10p013938 Quercus lobata HOM05D007939 ORTHO05D010027 4.7e-08 60.8 57 54.4
ATR0712G037 Amborella trichopoda HOM05D007939 ORTHO05D010027 6.1e-08 60.5 42 66.7
Zm00001eb302590 Zea mays HOM05D007939 ORTHO05D010027 8.0e-08 60.1 39 71.8
Medtr4g107140 Medicago truncatula HOM05D007939 ORTHO05D010027 1.8e-07 58.9 45 53.3
unitig_21.g20455 Utricularia gibba HOM05D002627 ORTHO05D010027 3.0e-07 58.2 49 51.0
Peaxi162Scf00689g00418 Petunia axillaris HOM05D007939 ORTHO05D010027 8.8e-07 56.6 66 47.0
Zm00001eb151290 Zea mays HOM05D007939 ORTHO05D010027 7.5e-06 53.5 38 63.2


User provided reference genes

Program Settings