Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 4.1e-107 391.3 192 100.0
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 3.8e-100 368.2 195 94.4
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.1e-96 356.7 192 92.2
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 1.6e-71 273.1 195 72.3
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 2.9e-68 262.3 193 74.1
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 3.4e-61 238.8 197 67.0
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 2.9e-60 235.7 195 66.2
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 2.5e-56 222.6 197 63.5
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 1.2e-37 160.6 194 50.0
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 2.0e-37 159.8 195 50.3
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 2.9e-36 156.0 214 45.3
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 5.0e-36 155.2 196 51.0
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 3.2e-35 152.5 192 47.9
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 4.2e-35 152.1 221 44.8
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 7.2e-35 151.4 213 48.4
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 9.4e-35 151.0 193 49.7
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 2.1e-34 149.8 193 49.7
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 1.4e-33 147.1 197 49.7
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 1.4e-33 147.1 201 47.3
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 1.4e-33 147.1 206 44.7
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 1.4e-33 147.1 201 49.8
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 2.3e-33 146.4 197 47.7
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 8.8e-33 144.4 193 48.2
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 2.0e-32 143.3 202 45.5
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.6e-32 142.9 199 49.2
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 3.3e-32 142.5 204 44.1
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 4.4e-32 142.1 204 44.1
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 5.7e-32 141.7 208 49.0
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 7.5e-32 141.4 207 44.9
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 9.7e-32 141.0 208 44.2
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 9.7e-32 141.0 201 50.2
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.3e-31 140.6 201 50.2
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 2.2e-31 139.8 191 47.6
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 2.2e-31 139.8 195 49.7
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.8e-31 139.4 204 43.6
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 6.3e-31 138.3 188 45.7
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 2.9e-28 129.4 194 44.3
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 5.0e-28 128.6 183 41.5
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 6.5e-28 128.3 189 45.0
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 6.5e-28 128.3 194 43.8
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 2.5e-27 126.3 191 43.5
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 7.2e-27 124.8 181 45.3
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 7.2e-27 124.8 195 44.6
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 9.4e-27 124.4 192 40.6
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 1.2e-26 124.0 191 44.0
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 1.2e-26 124.0 229 38.4
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 1.6e-26 123.6 186 43.0
PGSC0003DMG401029181 Solanum tuberosum HOM05D007332 ORTHO05D009297 2.1e-26 123.2 74 83.8
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 4.7e-26 122.1 234 38.0
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 8.0e-26 121.3 234 37.2
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 1.8e-25 120.2 232 37.1
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 1.8e-25 120.2 234 37.2
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 3.0e-25 119.4 194 42.3
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 4.0e-25 119.0 213 42.7
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 1.2e-24 117.5 194 42.8
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 1.2e-24 117.5 180 42.2
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 2.6e-24 116.3 238 38.2
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 4.4e-24 115.5 194 42.3
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 4.4e-24 115.5 187 40.1
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 5.7e-24 115.2 238 35.7
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 5.7e-24 115.2 197 41.6
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 5.7e-24 115.2 193 44.6
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 7.5e-24 114.8 239 38.9
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 7.5e-24 114.8 174 48.3
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 9.8e-24 114.4 230 36.1
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 4.8e-23 112.1 243 38.3
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 6.3e-23 111.7 242 36.8
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 8.3e-23 111.3 241 36.5
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 8.3e-23 111.3 228 37.3
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 1.4e-22 110.5 211 38.4
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 1.4e-22 110.5 211 38.4
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 1.4e-22 110.5 192 43.8
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 2.4e-22 109.8 229 36.2
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 9.1e-22 107.8 205 38.0
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 1.6e-21 107.1 229 35.4
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 2.0e-21 106.7 161 43.5
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 2.0e-21 106.7 200 36.5
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 4.5e-21 105.5 223 35.9
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 2.9e-20 102.8 164 42.7
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 2.9e-20 102.8 158 43.0
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 2.9e-20 102.8 197 39.1
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 1.1e-19 100.9 230 36.5
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 1.5e-19 100.5 194 38.1
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 2.5e-19 99.8 173 42.8
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 5.5e-19 98.6 191 38.7
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 1.8e-17 93.6 225 35.6
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 6.8e-17 91.7 207 36.2
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 8.9e-17 91.3 192 35.4
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 2.2e-15 86.7 128 45.3
A02p21250 Brassica napus HOM05D007332 ORTHO05D009297 4.9e-15 85.5 226 33.2
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 4.9e-15 85.5 216 34.7
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 6.3e-15 85.1 207 35.3
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 8.3e-15 84.7 165 37.6
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 1.2e-13 80.9 198 32.8
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 1.2e-13 80.9 184 38.0
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 2.0e-13 80.1 197 34.5
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 3.5e-13 79.3 195 34.4
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 1.1e-11 74.3 157 33.1
Migut.L00247 Erythranthe guttata HOM05D007332 ORTHO05D009297 1.4e-09 67.4 124 40.3
Migut.L00823 Erythranthe guttata HOM05D007332 ORTHO05D009297 1.4e-09 67.4 124 40.3
MBI06_g45442_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 1.4e-06 57.4 181 32.6
Aqoxy5G02371 Aquilegia oxysepala HOM05D007332 ORTHO05D009297 3.2e-06 56.2 150 30.7
THA.LOC104800214 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 4.1e-06 55.8 170 32.4


User provided reference genes

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