Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g112970.1 Solanum lycopersicum HOM05D008788 ORTHO05D012497 1.6e-147 526.2 278 100.0
Sopen03g032040 Solanum pennellii HOM05D008788 ORTHO05D012497 7.8e-139 497.3 278 94.6
PGSC0003DMG400018146 Solanum tuberosum HOM05D008788 ORTHO05D012497 5.8e-118 427.9 288 82.6
Nitab4.5_0000785g0060 Nicotiana tabacum HOM05D008788 ORTHO05D012497 3.3e-89 332.4 268 70.1
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 1.8e-87 326.6 272 67.3
Sopen03g032030 Solanum pennellii HOM05D008788 ORTHO05D012497 3.1e-87 325.9 272 68.0
Nitab4.5_0000984g0100 Nicotiana tabacum HOM05D008788 ORTHO05D012497 5.3e-87 325.1 273 68.5
Solyc03g112960.1 Solanum lycopersicum HOM05D008788 ORTHO05D012497 7.6e-86 321.2 272 66.5
CAN.G1305.14 Capsicum annuum HOM05D008788 ORTHO05D012497 1.5e-73 280.4 249 61.0
CAN.G1673.12 Capsicum annuum HOM05D008788 ORTHO05D012497 3.9e-66 255.8 219 63.0
Nitab4.5_0000741g0040 Nicotiana tabacum HOM05D008788 ORTHO05D012497 1.3e-45 187.6 247 48.2
Peaxi162Scf00267g00131 Petunia axillaris HOM05D008788 ORTHO05D012497 3.2e-36 156.4 286 39.9
CAN.G1305.15 Capsicum annuum HOM05D008788 ORTHO05D012497 4.2e-36 156.0 116 64.7
Nitab4.5_0000026g0140 Nicotiana tabacum HOM05D008788 ORTHO05D012497 1.1e-28 131.3 237 39.7
PGSC0003DMG400018147 Solanum tuberosum HOM05D008788 ORTHO05D012497 9.8e-25 118.2 122 60.7
Cc04_g17010 Coffea canephora HOM05D008788 ORTHO05D012497 1.4e-23 114.4 275 34.9
Nitab4.5_0000741g0020 Nicotiana tabacum HOM05D008788 ORTHO05D012497 1.4e-23 114.4 229 38.4
Migut.D01837 Erythranthe guttata HOM05D008788 ORTHO05D012497 5.6e-20 102.4 266 34.2
Cc04_g16990 Coffea canephora HOM05D008788 ORTHO05D012497 1.2e-19 101.3 276 32.6
Nitab4.5_0000026g0150 Nicotiana tabacum HOM05D008788 ORTHO05D012497 1.9e-15 87.4 190 34.2
Peaxi162Scf00267g00137 Petunia axillaris HOM05D008788 ORTHO05D012497 2.3e-13 80.5 107 43.0
Sabra01G0081700 Salix brachista HOM05D000281 ORTHO05D009440 5.0e-13 79.3 224 29.0
Oeu060796.1 Olea europaea HOM05D008788 ORTHO05D012497 6.6e-13 79.0 262 30.5
Manes.14G076700 Manihot esculenta HOM05D000281 ORTHO05D009440 1.9e-12 77.4 237 28.3
TWI81G0565 Tripterygium wilfordii HOM05D000281 ORTHO05D009440 7.3e-12 75.5 198 29.3
Potri.001G108200 Populus trichocarpa HOM05D000281 ORTHO05D009440 3.6e-11 73.2 221 29.9
Sabra03G0087100 Salix brachista HOM05D000281 ORTHO05D009440 1.4e-10 71.2 223 31.4
Peaxi162Scf00712g00610 Petunia axillaris HOM05D008788 ORTHO05D012497 1.8e-10 70.9 227 28.6
Potri.003G123500 Populus trichocarpa HOM05D000281 ORTHO05D009440 1.8e-10 70.9 232 29.3
Duzib068G0437 Durio zibethinus HOM05D000281 ORTHO05D009440 8.9e-10 68.6 231 24.2
Cc04_g17040 Coffea canephora HOM05D008788 ORTHO05D017864 1.7e-08 64.3 303 26.7
Cc04_g00700 Coffea canephora HOM05D000036 ORTHO05D002265 1.1e-07 61.6 191 24.6
Lsat_1_v5_gn_5_137800 Lactuca sativa HOM05D000036 ORTHO05D002265 1.1e-07 61.6 234 25.6
QL05p001219 Quercus lobata HOM05D000036 ORTHO05D002265 1.1e-07 61.6 166 27.1
Actinidia19045 Actinidia chinensis HOM05D008788 ORTHO05D009440 3.2e-07 60.1 94 35.1
THA.LOC104819444 Tarenaya hassleriana HOM05D000036 ORTHO05D009440 4.1e-07 59.7 211 24.2
Actinidia21837 Actinidia chinensis HOM05D000036 ORTHO05D002265 9.2e-07 58.5 197 30.5
Sabra03G0043500 Salix brachista HOM05D000036 ORTHO05D002265 9.2e-07 58.5 166 27.1
CSS0007314 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D002265 1.6e-06 57.8 217 25.3
CSS0042964 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D002265 1.6e-06 57.8 164 28.0
BcaC08g43560 Brassica carinata HOM05D000036 ORTHO05D002265 2.1e-06 57.4 187 25.7
TWI59G0275 Tripterygium wilfordii HOM05D000036 ORTHO05D002265 2.1e-06 57.4 165 26.7
Migut.D01839 Erythranthe guttata HOM05D018109 ORTHO05D017864 2.7e-06 57.0 280 27.5


User provided reference genes

Program Settings