Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 0.0e+00 1914.4 961 100.0
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 0.0e+00 1847.0 1020 92.4
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 0.0e+00 1398.3 983 76.1
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 0.0e+00 1156.4 1041 62.1
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.3e-305 1053.1 1040 56.8
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.2e-300 1036.6 1031 56.4
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.1e-229 800.8 1034 46.9
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 5.8e-210 735.3 1066 43.2
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 2.3e-206 723.4 1082 41.5
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 8.7e-206 721.5 992 43.8
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 5.7e-205 718.8 874 46.8
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.1e-203 713.0 875 47.1
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 6.5e-201 705.3 1025 42.7
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.5e-200 703.4 961 43.4
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 5.3e-195 685.6 1016 42.3
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 2.0e-194 683.7 938 44.7
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 7.7e-194 681.8 951 43.8
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 6.5e-193 678.7 999 42.4
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 7.9e-191 671.8 997 41.3
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 2.0e-189 667.2 974 42.2
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.0e-189 667.2 945 42.5
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 4.8e-188 662.5 1065 38.9
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 5.3e-187 659.1 831 44.8
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 3.5e-186 656.4 1011 41.3
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 4.5e-186 656.0 878 44.6
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 4.5e-186 656.0 889 43.8
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 7.7e-186 655.2 968 43.0
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 7.7e-186 655.2 913 43.4
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 5.0e-185 652.5 830 44.2
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 1.9e-184 650.6 1042 40.2
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 2.5e-184 650.2 1089 39.0
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 1.6e-183 647.5 1061 40.2
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 1.6e-183 647.5 1046 41.0
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.4e-182 644.4 1000 40.9
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 6.7e-182 642.1 1042 40.4
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 9.7e-181 638.3 949 41.8
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.7e-180 636.3 1043 40.3
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 1.1e-179 634.8 952 42.1
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 7.0e-179 632.1 887 42.2
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 9.1e-179 631.7 952 42.0
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.2e-178 631.3 910 42.5
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.2e-177 627.1 944 41.5
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 2.9e-177 626.7 974 41.0
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 1.9e-176 624.0 1033 40.2
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 4.2e-176 622.9 947 41.6
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 9.4e-176 621.7 939 42.3
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 9.4e-176 621.7 912 41.0
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 1.2e-175 621.3 990 40.6
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 4.7e-175 619.4 564 55.7
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 1.5e-173 614.4 1054 39.4
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 2.0e-173 614.0 1026 39.0
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 2.6e-173 613.6 867 43.1
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 3.4e-173 613.2 861 44.3
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 3.4e-173 613.2 1075 39.3
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 9.8e-173 611.7 984 40.1
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 2.2e-172 610.5 1054 39.2
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 4.8e-172 609.4 877 43.1
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.6e-170 604.4 881 41.7
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 2.0e-170 604.0 885 42.8
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 5.9e-170 602.4 955 42.1
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 2.2e-169 600.5 1044 37.5
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 2.5e-168 597.0 925 42.2
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 3.2e-168 596.7 891 42.5
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.1e-167 594.0 881 41.1
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.7e-167 592.8 1098 37.7
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 6.1e-167 592.4 1121 37.2
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.8e-166 590.9 894 42.4
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 3.0e-166 590.1 1040 37.7
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 3.0e-166 590.1 953 40.0
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 5.2e-166 589.3 863 42.3
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 5.2e-166 589.3 675 50.8
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 2.6e-165 587.0 485 61.4
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 9.8e-165 585.1 968 40.4
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 4.9e-164 582.8 487 61.4
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 7.0e-163 578.9 905 40.7
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 9.2e-163 578.6 861 41.7
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 5.9e-162 575.9 1034 37.8
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 5.9e-162 575.9 892 41.8
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 2.3e-161 573.9 962 39.2
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 4.3e-160 569.7 835 42.4
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 2.1e-159 567.4 870 41.4
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 4.7e-159 566.2 865 41.4
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 1.0e-158 565.1 945 39.9
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 1.8e-158 564.3 857 41.7
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 5.2e-158 562.8 889 39.9
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 1.2e-157 561.6 1060 36.8
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 1.5e-157 561.2 907 40.6
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 5.7e-157 559.3 839 41.4
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 6.4e-156 555.8 890 39.2
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 3.2e-155 553.5 814 41.5
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 1.2e-154 551.6 1016 36.5
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 5.9e-154 549.3 883 39.3
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.1e-152 545.0 804 42.0
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 7.3e-152 542.3 1053 36.3
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 1.5e-149 534.6 500 54.2
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 1.4e-147 528.1 986 37.0
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 9.2e-147 525.4 881 39.3
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 5.8e-141 506.1 792 41.9
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.6e-138 498.0 808 39.2
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 5.6e-128 463.0 777 39.1
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.4e-126 458.4 1037 33.8
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 4.2e-115 420.2 318 62.9
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 1.3e-111 408.7 340 58.8
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 3.1e-102 377.5 674 35.0
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 6.9e-102 376.3 418 45.5
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 2.2e-100 371.3 497 42.5
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 7.9e-98 362.8 764 34.9
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 3.0e-97 360.9 575 39.8
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 4.8e-95 353.6 504 42.9
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.4e-94 351.3 512 41.4
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 2.7e-90 337.8 797 33.4
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 6.7e-81 306.6 668 33.2
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 3.0e-73 281.2 639 31.9
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 4.5e-69 267.3 227 58.1
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 7.7e-69 266.5 232 62.1
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 1.5e-48 199.1 564 31.7
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 4.7e-34 151.0 524 28.4
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 5.4e-30 137.5 484 28.3
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 1.7e-23 115.9 111 57.7
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 1.9e-19 102.4 80 66.2
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 1.6e-18 99.4 94 54.3
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 2.8e-18 98.6 68 70.6
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 3.6e-18 98.2 210 31.0
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 6.2e-18 97.4 58 75.9
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 1.1e-17 96.7 49 89.8
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.8e-17 95.9 235 29.4
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 2.0e-16 92.4 53 79.2
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 8.4e-15 87.0 201 29.9
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.1e-09 70.1 60 61.7
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.6e-08 65.5 34 82.4
Peaxi162Scf00374g00720 Petunia axillaris HOM05D000861 ORTHO05D015732 5.8e-08 64.3 182 35.2


User provided reference genes

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